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NC_020847.1__YP_007674055.1__CPAG_00019__00019
Bact-VirNC_020847.1__YP_007674055.1__CPAG_00019__00019
Identity
- Accession:
- NC_020847 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-53
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 53.0 | 4.46e-01 | 92.5% | 52.6% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 54.0 | 4.47e-01 | 100.0% | 53.2% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.66 | 55.0 | 4.55e-01 | 100.0% | 64.9% |
| 4k3bA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.65 | 52.0 | 4.21e-01 | 100.0% | 54.3% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 52.0 | 4.27e-01 | 100.0% | 50.0% |
| 4jxqA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 47.0 | 3.23e-01 | 95.0% | 22.8% |
| 1xhsA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.63 | 48.0 | 3.60e-01 | 90.0% | 31.0% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 46.0 | 3.14e-01 | 90.0% | 27.9% |
| 5jtfB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 46.0 | 3.23e-01 | 95.0% | 23.4% |
| 2jlmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 47.0 | 3.27e-01 | 97.5% | 23.7% |
| 3dr6B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 47.0 | 3.29e-01 | 95.0% | 24.3% |
| 2yx1A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 52.0 | 3.43e-01 | 100.0% | 23.9% |
| 2ge3A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 46.0 | 3.23e-01 | 95.0% | 25.0% |
| 1vhsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 47.0 | 3.31e-01 | 97.5% | 25.5% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 45.0 | 2.94e-01 | 87.5% | 94.7% |
| 3g8wB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 45.0 | 3.21e-01 | 97.5% | 25.6% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 46.0 | 3.72e-01 | 95.0% | 44.0% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.59 | 46.0 | 3.20e-01 | 92.5% | 39.9% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.59 | 45.0 | 3.13e-01 | 92.5% | 39.0% |
| 1jmtA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 42.0 | 3.41e-01 | 90.0% | 43.9% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 43.0 | 3.24e-01 | 97.5% | 55.7% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.56 | 41.0 | 3.71e-01 | 90.0% | 61.2% |
| 2j8aA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 46.0 | 3.72e-01 | 100.0% | 50.6% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.55 | 44.0 | 2.92e-01 | 97.5% | 21.3% |
| 3ld2B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 44.0 | 3.11e-01 | 97.5% | 26.5% |
| 5c0oH00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 2.76e-01 | 92.5% | 26.5% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 2.85e-01 | 100.0% | 56.3% |
| 1wi8A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 42.0 | 3.53e-01 | 92.5% | 53.8% |
| 2fckA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 43.0 | 2.92e-01 | 97.5% | 81.5% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 38.0 | 3.26e-01 | 85.0% | 43.2% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.53 | 40.0 | 3.38e-01 | 100.0% | 45.7% |
| 2k6vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 39.0 | 2.81e-01 | 97.5% | 36.0% |
| 2fdoA00 | 3.30.1970.10 | Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like | 0.53 | 44.0 | 3.49e-01 | 97.5% | 59.1% |
| 2lu1A00 | 3.30.70.2370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.51e-01 | 100.0% | 53.9% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 36.0 | 2.96e-01 | 100.0% | 32.7% |
| 3htnB00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.53 | 40.0 | 3.00e-01 | 100.0% | 65.5% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.31e-01 | 95.0% | 48.9% |
| 1va9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 2.90e-01 | 87.5% | 68.0% |
| 1yk9A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 38.0 | 2.66e-01 | 95.0% | 42.4% |
| 3gz8C01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 39.0 | 2.94e-01 | 97.5% | 41.9% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.51 | 36.0 | 2.09e-01 | 82.5% | 21.1% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 2.73e-01 | 92.5% | 95.2% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.50 | 36.0 | 3.36e-01 | 85.0% | 80.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5076310 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.74 | 59.0 | 4.06e-01 | 95.0% | 27.7% |
| 3678439 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.74 | 54.0 | 3.46e-01 | 80.0% | 18.5% |
| 3073993 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 49.0 | 4.14e-01 | 75.0% | 45.5% |
| 3667432 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 57.0 | 4.46e-01 | 100.0% | 45.3% |
| 5012647 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 53.0 | 4.55e-01 | 100.0% | 50.7% |
| 4010403 | 310.3.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM | 0.67 | 54.0 | 4.18e-01 | 92.5% | 45.2% |
| 4966859 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.67 | 53.0 | 4.42e-01 | 92.5% | 69.3% |
| 3284477 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.67 | 53.0 | 4.39e-01 | 100.0% | 50.6% |
| 3721769 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.67 | 54.0 | 4.23e-01 | 100.0% | 40.0% |
| 3637847 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.66 | 51.0 | 4.05e-01 | 90.0% | 91.1% |
| 3313723 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 55.0 | 4.23e-01 | 95.0% | 47.4% |
| 3691422 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 54.0 | 4.28e-01 | 92.5% | 45.9% |
| 3724441 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 52.0 | 4.50e-01 | 92.5% | 58.5% |
| 3993716 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.64 | 50.0 | 4.33e-01 | 95.0% | 71.4% |
| 5078734 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.64 | 47.0 | 4.46e-01 | 82.5% | 70.0% |
| 5028935 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 47.0 | 4.12e-01 | 90.0% | 55.7% |
| 3685382 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 49.0 | 3.81e-01 | 92.5% | 37.0% |
| 3211527 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.62 | 48.0 | 3.19e-01 | 95.0% | 20.5% |
| 3669027 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 51.0 | 4.33e-01 | 95.0% | 57.1% |
| 4030735 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.62 | 46.0 | 3.68e-01 | 90.0% | 41.1% |
| 4977925 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.62 | 47.0 | 3.22e-01 | 97.5% | 23.2% |
| 5018871 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.62 | 46.0 | 3.21e-01 | 90.0% | 85.6% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.61 | 47.0 | 3.92e-01 | 90.0% | 50.6% |
| 3591484 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 48.0 | 3.87e-01 | 95.0% | 47.8% |
| 3325240 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.61 | 42.0 | 2.81e-01 | 72.5% | 16.8% |
| 3609138 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 47.0 | 3.57e-01 | 95.0% | 32.7% |
| 5024124 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.60 | 49.0 | 4.07e-01 | 100.0% | 57.5% |
| 5021419 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.60 | 46.0 | 3.18e-01 | 92.5% | 83.6% |
| 3566576 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.60 | 47.0 | 3.23e-01 | 90.0% | 24.4% |
| 4802890 | 3274.1.1.0 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) | 0.59 | 41.0 | 3.25e-01 | 75.0% | 35.9% |
| 1144777 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.59 | 49.0 | 3.73e-01 | 97.5% | 70.2% |
| 3494897 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 46.0 | 3.53e-01 | 95.0% | 36.4% |
| 3506174 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.58 | 47.0 | 4.05e-01 | 97.5% | 92.9% |
| 4564327 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.57 | 44.0 | 3.66e-01 | 92.5% | 49.4% |
| 3475708 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.57 | 40.0 | 3.99e-01 | 85.0% | 75.0% |
| 5025206 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.57 | 43.0 | 3.89e-01 | 90.0% | 56.9% |
| 3252307 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 39.0 | 2.63e-01 | 72.5% | 85.9% |
| 3582833 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.56 | 42.0 | 3.19e-01 | 85.0% | 69.1% |
| 4638770 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.55 | 36.0 | 2.94e-01 | 72.5% | 28.9% |
| 4978997 | 2004.1.2.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain | 0.55 | 41.0 | 2.39e-01 | 87.5% | 34.3% |
| 2089693 | 2492.1.1.13 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › PROCT | 0.55 | 44.0 | 2.70e-01 | 100.0% | 67.7% |
| 4943019 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.55 | 41.0 | 3.68e-01 | 95.0% | 58.6% |
| 5037750 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.55 | 38.0 | 2.50e-01 | 75.0% | 39.5% |
| 4991990 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.54 | 44.0 | 3.51e-01 | 100.0% | 41.0% |
| 3721755 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 43.0 | 3.08e-01 | 95.0% | 31.9% |
| 7745 | 4102.1.1.1 ↗ | a+b duplicates or obligate multimers › AF2331-like › AF2331-like › AF2331-like › AF2331-like | 0.53 | 44.0 | 3.46e-01 | 97.5% | 60.9% |
| 3562501 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.52 | 36.0 | 3.10e-01 | 80.0% | 47.5% |
| 3831489 | 328.7.1.2 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain › PF29032 | 0.52 | 38.0 | 3.39e-01 | 97.5% | 52.9% |
| 5080307 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.52 | 38.0 | 3.73e-01 | 85.0% | 80.0% |
| 3193779 | 312.1.1.11 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N | 0.51 | 36.0 | 2.50e-01 | 77.5% | 88.4% |
| 5041156 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.51 | 36.0 | 2.62e-01 | 90.0% | 63.0% |
| 3038102 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.50 | 36.0 | 3.42e-01 | 87.5% | 100.0% |
D2
high
residues 58-129
Domain cluster:
representative
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.96 | 66.0 | 7.11e-01 | 70.8% | 100.0% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.93 | 77.0 | 7.50e-01 | 86.1% | 93.5% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.93 | 60.0 | 7.37e-01 | 70.8% | 100.0% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.92 | 84.0 | 8.39e-01 | 100.0% | 94.5% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.92 | 76.0 | 7.65e-01 | 86.1% | 87.3% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 74.0 | 5.70e-01 | 87.5% | 42.4% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 72.0 | 5.09e-01 | 81.9% | 31.6% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.90 | 80.0 | 6.69e-01 | 100.0% | 59.6% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.89 | 84.0 | 5.61e-01 | 100.0% | 30.4% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.88 | 63.0 | 6.21e-01 | 73.6% | 70.7% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 83.0 | 7.25e-01 | 100.0% | 79.4% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.88 | 74.0 | 6.65e-01 | 97.2% | 67.4% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.88 | 70.0 | 6.22e-01 | 83.3% | 61.9% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.88 | 77.0 | 6.06e-01 | 94.4% | 49.6% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.87 | 75.0 | 5.14e-01 | 91.7% | 33.8% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.87 | 81.0 | 5.47e-01 | 100.0% | 30.9% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.87 | 81.0 | 7.90e-01 | 100.0% | 97.4% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.87 | 69.0 | 6.79e-01 | 84.7% | 78.9% |
| 6z01B03 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.87 | 64.0 | 4.82e-01 | 79.2% | 35.7% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.86 | 66.0 | 6.04e-01 | 80.6% | 62.4% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.86 | 75.0 | 5.49e-01 | 98.6% | 38.3% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.86 | 61.0 | 5.96e-01 | 75.0% | 68.8% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.86 | 73.0 | 5.47e-01 | 93.1% | 41.0% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.86 | 72.0 | 6.75e-01 | 88.9% | 78.8% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.86 | 77.0 | 6.91e-01 | 95.8% | 72.6% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.85 | 76.0 | 6.10e-01 | 100.0% | 53.1% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.84 | 71.0 | 7.40e-01 | 100.0% | 98.5% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 77.0 | 5.73e-01 | 100.0% | 43.9% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 76.0 | 5.48e-01 | 97.2% | 96.8% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 75.0 | 6.45e-01 | 95.8% | 65.1% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.83 | 68.0 | 6.22e-01 | 86.1% | 70.3% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.83 | 75.0 | 6.53e-01 | 98.6% | 82.1% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.83 | 71.0 | 5.48e-01 | 93.1% | 43.7% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 77.0 | 6.65e-01 | 100.0% | 69.5% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.82 | 75.0 | 7.03e-01 | 98.6% | 84.9% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 71.0 | 7.41e-01 | 97.2% | 100.0% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.82 | 74.0 | 5.65e-01 | 100.0% | 46.0% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.82 | 68.0 | 6.25e-01 | 88.9% | 72.2% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.82 | 73.0 | 5.91e-01 | 97.2% | 53.4% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.81 | 74.0 | 5.40e-01 | 100.0% | 98.9% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.81 | 74.0 | 6.81e-01 | 98.6% | 97.8% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.81 | 73.0 | 4.96e-01 | 98.6% | 38.0% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 72.0 | 6.49e-01 | 97.2% | 75.0% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.81 | 74.0 | 5.90e-01 | 100.0% | 54.8% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.81 | 70.0 | 6.31e-01 | 93.1% | 71.6% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.80 | 76.0 | 7.28e-01 | 100.0% | 90.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 72.0 | 7.12e-01 | 100.0% | 93.3% |
| 3zdqA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.80 | 72.0 | 4.61e-01 | 100.0% | 26.7% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 70.0 | 6.40e-01 | 93.1% | 73.6% |
| 1otkA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 65.0 | 4.41e-01 | 88.9% | 25.8% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 65.0 | 4.99e-01 | 87.5% | 45.8% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.79 | 72.0 | 6.97e-01 | 100.0% | 97.5% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 63.0 | 6.65e-01 | 84.7% | 98.4% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 73.0 | 6.54e-01 | 100.0% | 96.9% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 67.0 | 7.04e-01 | 94.4% | 100.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 70.0 | 5.48e-01 | 98.6% | 53.1% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 69.0 | 6.21e-01 | 100.0% | 71.4% |
| 6humG01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.78 | 61.0 | 4.63e-01 | 83.3% | 78.1% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.77 | 68.0 | 5.34e-01 | 100.0% | 48.3% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 67.0 | 4.55e-01 | 100.0% | 30.7% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.76 | 55.0 | 5.88e-01 | 77.8% | 88.7% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.76 | 63.0 | 6.50e-01 | 97.2% | 98.5% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 62.0 | 6.43e-01 | 100.0% | 95.6% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 56.0 | 6.04e-01 | 97.2% | 100.0% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 65.0 | 5.37e-01 | 100.0% | 59.2% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 63.0 | 6.27e-01 | 97.2% | 98.7% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 62.0 | 6.10e-01 | 100.0% | 89.6% |
| 3zciA00 | 1.20.58.1660 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 64.0 | 4.74e-01 | 100.0% | 38.2% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.72 | 66.0 | 6.24e-01 | 100.0% | 89.4% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 64.0 | 6.26e-01 | 100.0% | 97.4% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 60.0 | 6.08e-01 | 100.0% | 97.2% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.60 | 49.0 | 4.12e-01 | 91.7% | 82.7% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3224742 | 3755.3.1.9 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › SH3BP5 | 0.95 | 77.0 | 5.27e-01 | 84.7% | 100.0% |
| 3266812 | 3291.1.1.211 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › EMC3_TMCO1 | 0.92 | 83.0 | 6.16e-01 | 94.4% | 44.4% |
| 3763454 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.92 | 87.0 | 7.14e-01 | 100.0% | 60.8% |
| 3418094 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.92 | 70.0 | 6.72e-01 | 80.6% | 71.2% |
| 3629711 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.91 | 83.0 | 6.79e-01 | 95.8% | 57.5% |
| 3216585 | 3291.1.1.172 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A | 0.91 | 86.0 | 6.59e-01 | 100.0% | 60.0% |
| 3550436 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.91 | 86.0 | 7.41e-01 | 100.0% | 70.2% |
| 3487846 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.91 | 86.0 | 6.59e-01 | 100.0% | 50.3% |
| 3766400 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.91 | 86.0 | 7.25e-01 | 100.0% | 66.4% |
| 3934585 | 3755.3.1.465 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A | 0.90 | 85.0 | 6.49e-01 | 100.0% | 48.0% |
| 4032017 | 2004.1.1.301 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 | 0.90 | 86.0 | 4.88e-01 | 100.0% | 54.2% |
| 3713604 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.90 | 83.0 | 5.22e-01 | 98.6% | 22.8% |
| 3884649 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.90 | 84.0 | 7.50e-01 | 98.6% | 76.8% |
| 3570403 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.90 | 84.0 | 6.81e-01 | 100.0% | 59.2% |
| 3693881 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.90 | 81.0 | 8.20e-01 | 100.0% | 98.6% |
| 5045256 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.90 | 82.0 | 7.38e-01 | 98.6% | 73.7% |
| 4016635 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.89 | 84.0 | 7.41e-01 | 100.0% | 73.0% |
| 3167235 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.89 | 84.0 | 6.27e-01 | 100.0% | 45.6% |
| 3520611 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.89 | 84.0 | 6.02e-01 | 100.0% | 38.9% |
| 4945931 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.89 | 81.0 | 8.22e-01 | 100.0% | 98.6% |
| 3504474 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.89 | 84.0 | 7.36e-01 | 100.0% | 74.0% |
| 3417096 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.89 | 82.0 | 6.97e-01 | 98.6% | 65.5% |
| 3605450 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.89 | 84.0 | 5.19e-01 | 100.0% | 21.1% |
| 3796836 | 3755.3.1.311 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › TTC3 | 0.89 | 81.0 | 5.00e-01 | 98.6% | 19.7% |
| 3692897 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.89 | 77.0 | 7.66e-01 | 93.1% | 89.3% |
| 4937862 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.88 | 83.0 | 7.05e-01 | 100.0% | 66.4% |
| 4062183 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.88 | 81.0 | 8.00e-01 | 97.2% | 94.7% |
| 4363487 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 76.0 | 6.65e-01 | 93.1% | 65.0% |
| 1171038 | 3755.3.1.148 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CT398_CC | 0.88 | 82.0 | 5.85e-01 | 100.0% | 38.2% |
| 3925849 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.88 | 83.0 | 5.69e-01 | 100.0% | 73.0% |
| 3634896 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.88 | 82.0 | 6.87e-01 | 100.0% | 63.5% |
| 3256857 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.88 | 75.0 | 4.74e-01 | 93.1% | 20.6% |
| 3614078 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 77.0 | 6.35e-01 | 100.0% | 55.8% |
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.88 | 83.0 | 7.59e-01 | 100.0% | 100.0% |
| 3174647 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.88 | 79.0 | 8.07e-01 | 100.0% | 98.6% |
| 3940953 | 109.4.1.623 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1 | 0.88 | 82.0 | 4.59e-01 | 100.0% | 14.6% |
| 3707204 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 81.0 | 5.25e-01 | 100.0% | 25.3% |
| 3240117 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.87 | 81.0 | 7.47e-01 | 100.0% | 88.9% |
| 3470739 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 81.0 | 5.62e-01 | 100.0% | 34.0% |
| 3253483 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.87 | 78.0 | 7.95e-01 | 100.0% | 98.6% |
| 4165448 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.87 | 80.0 | 6.95e-01 | 98.6% | 68.6% |
| 3253663 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.87 | 81.0 | 6.67e-01 | 100.0% | 60.0% |
| 4175684 | 3291.1.1.232 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Paralemmin | 0.87 | 81.0 | 6.50e-01 | 100.0% | 56.2% |
| 3583684 | 148.1.3.11 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MT | 0.87 | 81.0 | 5.31e-01 | 100.0% | 29.6% |
| 4576287 | 3755.3.1.471 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Paralemmin | 0.87 | 81.0 | 6.13e-01 | 100.0% | 47.1% |
| 5053066 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.87 | 80.0 | 5.45e-01 | 100.0% | 31.1% |
| 3627942 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.87 | 81.0 | 5.93e-01 | 100.0% | 65.7% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.86 | 81.0 | 7.26e-01 | 100.0% | 76.8% |
| 4115372 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.86 | 79.0 | 6.77e-01 | 98.6% | 65.5% |
| 3492118 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.86 | 81.0 | 5.34e-01 | 100.0% | 30.8% |
| 3290879 | 3922.1.1.155 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF4349 | 0.86 | 79.0 | 8.05e-01 | 100.0% | 100.0% |
| 3706209 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.86 | 78.0 | 6.03e-01 | 97.2% | 49.7% |
| 4565398 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.86 | 74.0 | 6.53e-01 | 91.7% | 68.0% |
| 5050139 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 78.0 | 7.71e-01 | 97.2% | 94.7% |
| 3996264 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.86 | 79.0 | 5.87e-01 | 100.0% | 42.9% |
| 3195080 | 109.4.1.368 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SHNi-TPR | 0.85 | 80.0 | 5.03e-01 | 100.0% | 30.9% |
| 3657123 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.85 | 79.0 | 7.13e-01 | 100.0% | 76.8% |
| 3917888 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.85 | 79.0 | 6.62e-01 | 100.0% | 63.5% |
| 3965569 | 150.1.1.183 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Transposase_20 | 0.85 | 76.0 | 5.50e-01 | 95.8% | 39.4% |
| 3453933 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 78.0 | 6.68e-01 | 100.0% | 67.3% |
| 4345287 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.85 | 73.0 | 6.44e-01 | 91.7% | 68.0% |
| 3478399 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.85 | 76.0 | 5.20e-01 | 97.2% | 31.7% |
| 4221982 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.84 | 75.0 | 6.59e-01 | 94.4% | 68.0% |
| 2142296 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.84 | 71.0 | 6.36e-01 | 93.1% | 66.3% |
| 4272021 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.84 | 76.0 | 6.67e-01 | 95.8% | 70.0% |
| 3219646 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.84 | 61.0 | 6.81e-01 | 76.4% | 100.0% |
| 5036915 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.84 | 78.0 | 5.13e-01 | 100.0% | 27.0% |
| 3864054 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.84 | 77.0 | 6.34e-01 | 100.0% | 58.4% |
| 5048590 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.84 | 78.0 | 6.64e-01 | 100.0% | 66.4% |
| 4179301 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.84 | 78.0 | 6.63e-01 | 100.0% | 66.4% |
| 4979981 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.84 | 78.0 | 6.64e-01 | 100.0% | 67.3% |
| 4223425 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.84 | 75.0 | 6.56e-01 | 97.2% | 67.6% |
| 3985434 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.83 | 70.0 | 6.51e-01 | 93.1% | 73.3% |
| 4963973 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.83 | 76.0 | 5.65e-01 | 100.0% | 51.2% |
| 3777742 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.83 | 77.0 | 4.67e-01 | 100.0% | 18.3% |
| 3484694 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 75.0 | 4.74e-01 | 98.6% | 23.0% |
| 3166862 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.82 | 70.0 | 5.04e-01 | 91.7% | 35.2% |
| 4247116 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.82 | 76.0 | 6.52e-01 | 100.0% | 66.4% |
| 3699649 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.82 | 77.0 | 5.70e-01 | 100.0% | 100.0% |
| 4041347 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.82 | 76.0 | 6.48e-01 | 100.0% | 66.4% |
| 4060910 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.82 | 75.0 | 6.52e-01 | 98.6% | 68.6% |
| 4074458 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.82 | 69.0 | 6.12e-01 | 93.1% | 65.0% |
| 4219465 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.82 | 75.0 | 6.43e-01 | 100.0% | 66.4% |
| 3478257 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.82 | 74.0 | 6.61e-01 | 100.0% | 73.0% |
| 3355429 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.81 | 68.0 | 7.16e-01 | 95.8% | 100.0% |
| 4936497 | 150.1.1.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › EncFtn-like | 0.81 | 70.0 | 6.50e-01 | 93.1% | 76.1% |
| 3216709 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.81 | 62.0 | 5.75e-01 | 81.9% | 65.6% |
| 5081365 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.80 | 73.0 | 5.70e-01 | 98.6% | 49.7% |
| 3630501 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.79 | 71.0 | 4.47e-01 | 100.0% | 20.9% |
| 4950274 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.79 | 65.0 | 5.86e-01 | 93.1% | 65.7% |
| 4156333 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.79 | 72.0 | 5.58e-01 | 100.0% | 48.7% |
| 4972214 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 72.0 | 4.29e-01 | 100.0% | 29.6% |
| 4429835 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.73 | 60.0 | 5.41e-01 | 93.1% | 65.0% |
| 3737517 | 3560.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Med8 | 0.70 | 58.0 | 4.35e-01 | 98.6% | 35.8% |