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NC_020860.1__YP_007675704.1__CEPG_00028__00028

Bact-Vir

NC_020860.1__YP_007675704.1__CEPG_00028__00028

Identity

Accession:
NC_020860 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cellulophaga_phage_phiSM

TaxID: 756280

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-82
PDB
Domain cluster: rep: KY421186.2__APZ82863.1__X__00073__D4-76
D2 high residues 242-342
PDB
Domain cluster: rep: MT732475.1__QQV91596.1__Peternella1_60__00060__D216-310
D3 medium residues 87-175
PDB
Domain cluster: rep: MW824397.1__QZI91684.1__PODOV088v1_p0023__00023__D41-137
D4 medium residues 179-237
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7apeB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 41.0 3.02e-01 86.4% 63.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3606207 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 48.0 2.86e-01 81.4% 14.9%
3446439 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.54 41.0 2.61e-01 83.1% 64.1%