NC_020860.1__YP_007675719.1__CEPG_00043__00043

Bact-Vir

Identity

85.6 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Cellulophaga_phage_phiSM

TaxID: 756280

View cluster (5 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-75_93-105

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1h2iA01	3.30.390.80	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22	0.81	71.0	5.50e-01	94.5%	61.5%
7kfuC02	1.20.120.920	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain	0.57	43.0	3.08e-01	83.6%	79.8%
2nrhB02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.52	36.0	2.92e-01	71.2%	41.7%
3cjnA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	40.0	3.29e-01	87.7%	74.7%
3gudA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	40.0	3.44e-01	87.7%	93.3%
4fhdA02	3.80.30.30	Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme ›	0.50	38.0	2.79e-01	84.9%	63.9%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3262206	330.1.1.4 ↗	a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22	0.78	70.0	5.34e-01	98.6%	56.2%
1871052	330.1.1.4 ↗	a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22	0.78	70.0	5.11e-01	98.6%	50.0%
4927355	2004.1.1.144 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2	0.57	46.0	3.12e-01	87.7%	25.3%
324235	7569.1.1.0 ↗	a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like	0.57	42.0	3.01e-01	79.5%	93.3%
5031727	101.1.2.150 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_45	0.56	39.0	3.61e-01	74.0%	92.6%
5054872	101.1.2.1 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_1	0.52	40.0	3.60e-01	83.6%	96.2%
3896368	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.50	38.0	3.10e-01	83.6%	64.9%

D2 medium residues 76-92_106-156

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
8b2sA01	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.61	37.0	2.88e-01	88.2%	27.3%
1kq4A00	3.30.1360.170	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 ›	0.53	46.0	3.27e-01	97.1%	91.1%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5023671	218.1.1.0 ↗	a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like	0.65	33.0	3.59e-01	80.9%	58.2%
3991082	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.56	42.0	4.35e-01	88.2%	84.6%
4947525	247.1.1.0 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase	0.54	38.0	2.52e-01	75.0%	38.2%
3732196	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.53	39.0	4.12e-01	79.4%	88.3%
5064458	2004.1.1.195 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C	0.53	41.0	2.59e-01	85.3%	40.8%
4609873	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.52	37.0	3.04e-01	76.5%	55.4%
3399675	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.51	36.0	3.67e-01	85.3%	76.9%