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NC_020860.1__YP_007675731.1__CEPG_00055__00055
Bact-VirNC_020860.1__YP_007675731.1__CEPG_00055__00055
Identity
- Accession:
- NC_020860 ↗
- Kingdom:
- phage
Quality
94.2
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-132
Domain cluster:
rep: HQ268735.1__ADT64008.1__X__00001__D28-171
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14489.12 best | QueF | 72.3 | 4.40e-20 | 72.4% | 88.9% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f8bA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.96 | 93.0 | 8.24e-01 | 100.0% | 84.2% |
| 3bp1A02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.94 | 82.0 | 7.39e-01 | 100.0% | 70.7% |
| 1a8rA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.88 | 83.0 | 7.53e-01 | 100.0% | 86.8% |
| 4uqfA02 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.88 | 83.0 | 7.52e-01 | 100.0% | 88.1% |
| 3uxjA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.87 | 78.0 | 7.45e-01 | 93.3% | 89.0% |
| 3v9oA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.75 | 66.0 | 6.26e-01 | 94.3% | 91.7% |
| 3wlvA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.74 | 67.0 | 4.82e-01 | 100.0% | 91.4% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.71 | 38.0 | 4.90e-01 | 98.1% | 93.2% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.68 | 35.0 | 4.62e-01 | 99.0% | 92.9% |
| 6e5bN00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.57 | 47.0 | 3.86e-01 | 95.2% | 47.7% |
| 4jhyA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.55 | 39.0 | 3.43e-01 | 74.3% | 85.3% |
| 3px5A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 41.0 | 4.05e-01 | 86.7% | 80.2% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 40.0 | 4.11e-01 | 81.9% | 91.1% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 41.0 | 3.84e-01 | 84.8% | 70.8% |
| 1vzyA01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.52 | 43.0 | 3.44e-01 | 94.3% | 88.5% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 40.0 | 3.96e-01 | 85.7% | 80.9% |
| 5xd7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 41.0 | 3.88e-01 | 86.7% | 74.0% |
| 2oktA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 41.0 | 3.86e-01 | 90.5% | 71.1% |
| 1ix2A00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.72e-01 | 81.0% | 76.5% |
| 5jtwA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.53e-01 | 81.0% | 73.5% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 33.0 | 3.40e-01 | 94.3% | 70.0% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4592549 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.97 | 95.0 | 8.57e-01 | 100.0% | 79.7% |
| 5079824 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.97 | 93.0 | 9.15e-01 | 100.0% | 94.5% |
| 1281053 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.96 | 93.0 | 8.13e-01 | 100.0% | 80.7% |
| 4545112 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.96 | 93.0 | 8.63e-01 | 100.0% | 84.8% |
| 4320720 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.96 | 93.0 | 8.51e-01 | 100.0% | 82.2% |
| 4096732 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.96 | 93.0 | 8.47e-01 | 100.0% | 82.3% |
| 4532983 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.95 | 93.0 | 8.60e-01 | 100.0% | 84.0% |
| 4980631 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.95 | 92.0 | 8.52e-01 | 100.0% | 84.8% |
| 4214211 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.94 | 88.0 | 7.72e-01 | 100.0% | 71.3% |
| 5083623 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.93 | 90.0 | 8.35e-01 | 100.0% | 84.8% |
| 1917149 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.93 | 85.0 | 8.43e-01 | 99.0% | 92.7% |
| 4116093 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.92 | 88.0 | 7.73e-01 | 100.0% | 73.1% |
| 4519113 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.90 | 85.0 | 6.92e-01 | 100.0% | 63.9% |
| 4024225 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.89 | 84.0 | 6.72e-01 | 100.0% | 61.6% |
| 3207298 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.89 | 84.0 | 6.43e-01 | 100.0% | 54.9% |
| 4074298 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.88 | 83.0 | 6.55e-01 | 100.0% | 62.5% |
| 4423132 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.88 | 83.0 | 6.60e-01 | 100.0% | 60.5% |
| 5749 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.88 | 83.0 | 6.34e-01 | 100.0% | 53.4% |
| 4173308 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.88 | 83.0 | 6.74e-01 | 100.0% | 64.4% |
| None | — | 0.87 | 83.0 | 6.73e-01 | 100.0% | 64.4% | |
| 4129261 | 230.1.1.7 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF_N | 0.87 | 79.0 | 7.46e-01 | 93.3% | 87.5% |
| 4357519 | 230.1.1.7 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF_N | 0.87 | 78.0 | 7.08e-01 | 93.3% | 88.1% |
| 4441969 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.87 | 82.0 | 6.63e-01 | 100.0% | 62.7% |
| 4108348 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.87 | 82.0 | 6.49e-01 | 100.0% | 62.6% |
| 4074332 | 230.1.1.7 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF_N | 0.87 | 78.0 | 7.28e-01 | 93.3% | 84.8% |
| 3365873 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.86 | 81.0 | 5.27e-01 | 100.0% | 33.4% |
| 4268946 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.86 | 67.0 | 7.44e-01 | 81.0% | 100.0% |
| 3663526 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.86 | 80.0 | 6.28e-01 | 100.0% | 64.9% |
| 4990176 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.84 | 78.0 | 6.56e-01 | 100.0% | 68.2% |
| 3680284 | 230.1.1.2 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI | 0.83 | 78.0 | 6.12e-01 | 100.0% | 65.5% |
| 4373994 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.81 | 71.0 | 6.75e-01 | 93.3% | 96.7% |
| 3267306 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.80 | 69.0 | 6.51e-01 | 92.4% | 91.2% |
| 4276407 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.80 | 70.0 | 6.41e-01 | 94.3% | 94.1% |
| 4112511 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.80 | 70.0 | 6.53e-01 | 93.3% | 100.0% |
| 4551640 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.79 | 68.0 | 6.24e-01 | 92.4% | 100.0% |
| 5048343 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.79 | 69.0 | 6.31e-01 | 94.3% | 95.6% |
| 4488222 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.76 | 66.0 | 6.15e-01 | 94.3% | 90.0% |
| 4112665 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.75 | 66.0 | 6.50e-01 | 94.3% | 97.3% |
| 4928585 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.75 | 64.0 | 5.65e-01 | 92.4% | 98.7% |
| 4196358 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.75 | 64.0 | 6.15e-01 | 93.3% | 98.3% |
| 4119784 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.74 | 66.0 | 6.29e-01 | 98.1% | 100.0% |
| 161965 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.73 | 64.0 | 6.40e-01 | 92.4% | 99.0% |
| 4586646 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.72 | 64.0 | 6.05e-01 | 98.1% | 96.8% |
| 4284384 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.71 | 61.0 | 5.75e-01 | 94.3% | 96.8% |
| 3956610 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.66 | 47.0 | 3.71e-01 | 75.2% | 78.7% |
| 4031896 | 210.1.2.2 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › CBAH | 0.58 | 48.0 | 3.44e-01 | 91.4% | 89.5% |
| 2980432 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.57 | 48.0 | 3.95e-01 | 94.3% | 61.1% |
| 4325844 | 5085.1.1.2 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 | 0.54 | 38.0 | 2.52e-01 | 97.1% | 17.3% |
| 3721221 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.53 | 30.0 | 3.27e-01 | 88.6% | 65.6% |
| 2393149 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.52 | 35.0 | 3.41e-01 | 97.1% | 61.3% |
| 2123424 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.52 | 42.0 | 4.01e-01 | 90.5% | 80.8% |
| 5001433 | 244.2.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim | 0.51 | 40.0 | 3.69e-01 | 89.5% | 65.9% |
| 3411325 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.50 | 43.0 | 3.53e-01 | 99.0% | 88.8% |