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NC_020863.1__YP_007676052.1__VPIG_00194__00192
Bact-VirNC_020863.1__YP_007676052.1__VPIG_00194__00192
Identity
- Accession:
- NC_020863 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-84_191-335
Domain cluster:
rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xehA01 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.76 | 43.0 | 5.66e-01 | 75.1% | 100.0% |
| 5ibqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 45.0 | 5.42e-01 | 95.0% | 97.0% |
| 1ba2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 43.0 | 5.31e-01 | 95.0% | 97.6% |
| 1gcaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 49.0 | 5.60e-01 | 95.5% | 96.6% |
| 5hsgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 43.0 | 5.26e-01 | 94.5% | 97.6% |
| 4ru1A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 46.0 | 5.37e-01 | 95.5% | 95.7% |
| 3gbvA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 46.0 | 5.40e-01 | 96.0% | 97.1% |
| 4joqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 45.0 | 5.26e-01 | 96.0% | 93.6% |
| 3l49A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 43.0 | 5.26e-01 | 95.5% | 97.7% |
| 2x7xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 43.0 | 5.22e-01 | 95.5% | 96.9% |
| 2vk2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 44.0 | 5.26e-01 | 95.0% | 97.7% |
| 3d02A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 48.0 | 5.50e-01 | 95.5% | 98.0% |
| 2rjoA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 48.0 | 5.50e-01 | 95.0% | 96.6% |
| 4yo7A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 42.0 | 5.06e-01 | 95.0% | 93.8% |
| 4irxA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 42.0 | 5.05e-01 | 95.0% | 92.5% |
| 1abeA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 45.0 | 5.32e-01 | 98.5% | 97.8% |
| 4ry8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 44.0 | 5.02e-01 | 100.0% | 88.5% |
| 4y9tA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 47.0 | 5.36e-01 | 95.0% | 97.2% |
| 1jx6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 45.0 | 4.73e-01 | 95.0% | 74.7% |
| 3rotA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 44.0 | 5.18e-01 | 96.0% | 97.8% |
| 7x0hC01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 39.0 | 4.67e-01 | 93.5% | 84.7% |
| 2h3hA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 47.0 | 5.35e-01 | 98.5% | 97.3% |
| 4rweA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 41.0 | 5.04e-01 | 94.5% | 96.9% |
| 3l6uA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 41.0 | 5.05e-01 | 98.5% | 98.4% |
| 4rxuA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 46.0 | 5.23e-01 | 95.5% | 96.6% |
| 4kvfA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 47.0 | 5.19e-01 | 95.5% | 91.9% |
| 5ul3A01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.63 | 48.0 | 5.33e-01 | 94.0% | 99.4% |
| 2cjpA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 46.0 | 3.90e-01 | 73.6% | 98.8% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 42.0 | 4.95e-01 | 91.5% | 98.5% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 47.0 | 5.20e-01 | 98.5% | 96.9% |
| 4wzzA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 47.0 | 5.15e-01 | 95.5% | 96.3% |
| 3q41A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 54.0 | 5.55e-01 | 95.5% | 97.4% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 47.0 | 5.16e-01 | 99.5% | 98.1% |
| 6vapB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 43.0 | 4.10e-01 | 73.1% | 100.0% |
| 1f2dA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 43.0 | 4.22e-01 | 74.1% | 83.6% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 48.0 | 4.24e-01 | 85.6% | 77.6% |
| 4d79A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 46.0 | 4.29e-01 | 79.6% | 87.2% |
| 4rsmD01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 44.0 | 4.79e-01 | 98.0% | 95.7% |
| 3lncA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 32.0 | 3.90e-01 | 78.6% | 82.8% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 43.0 | 4.05e-01 | 100.0% | 63.7% |
| 3r2uB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 34.0 | 3.14e-01 | 85.6% | 45.6% |
| 6jmgB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 4.53e-01 | 78.6% | 97.7% |
| 3kbbA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 38.0 | 4.48e-01 | 76.1% | 98.6% |
| 1o20A02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.55 | 32.0 | 3.69e-01 | 81.1% | 76.5% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 39.0 | 4.13e-01 | 94.5% | 81.8% |
| 3b1dA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 44.0 | 4.29e-01 | 89.6% | 76.4% |
| 1vqtA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 39.0 | 4.03e-01 | 78.6% | 77.5% |
| 4o1gA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 49.0 | 4.19e-01 | 99.0% | 96.9% |
| 3ezsA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 43.0 | 4.05e-01 | 89.6% | 69.7% |
| 2qipA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 36.0 | 4.06e-01 | 70.1% | 95.7% |
| 3ooqA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 48.0 | 4.21e-01 | 97.0% | 89.0% |
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 44.0 | 4.13e-01 | 100.0% | 72.4% |
| 3b46A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 44.0 | 4.09e-01 | 90.5% | 70.6% |
| 2ftpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 45.0 | 3.91e-01 | 91.0% | 72.7% |
| 6ktqA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 44.0 | 3.93e-01 | 100.0% | 64.4% |
| 1mjgM02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 38.0 | 3.97e-01 | 75.1% | 99.5% |
| 3b1nA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 47.0 | 4.04e-01 | 98.0% | 98.1% |
| 1a5aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.95e-01 | 100.0% | 69.4% |
| 7dz9A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.51 | 44.0 | 4.06e-01 | 100.0% | 72.1% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 44.0 | 4.10e-01 | 92.0% | 81.6% |
| 2zwrB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 31.0 | 3.14e-01 | 85.1% | 58.5% |
| 2afbB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 45.0 | 3.88e-01 | 99.0% | 98.5% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945699 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.92 | 90.0 | 8.47e-01 | 100.0% | 95.7% |
| 3948874 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.88 | 85.0 | 7.92e-01 | 100.0% | 89.6% |
| 4988098 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.85 | 82.0 | 7.71e-01 | 100.0% | 87.7% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.84 | 80.0 | 7.07e-01 | 100.0% | 89.1% |
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.82 | 79.0 | 7.25e-01 | 100.0% | 88.0% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.81 | 77.0 | 7.43e-01 | 100.0% | 96.9% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.79 | 71.0 | 6.29e-01 | 94.0% | 88.1% |
| 4129573 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.71 | 44.0 | 5.33e-01 | 94.5% | 91.9% |
| 4127803 | 2007.1.3.16 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N | 0.68 | 40.0 | 4.88e-01 | 77.6% | 90.0% |
| 3947059 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.67 | 49.0 | 5.45e-01 | 96.0% | 96.1% |
| 3289817 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.67 | 45.0 | 5.19e-01 | 95.5% | 93.8% |
| 5031612 | 2007.1.9.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC | 0.66 | 44.0 | 5.00e-01 | 78.6% | 87.6% |
| 4361090 | 2007.1.3.16 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N | 0.66 | 39.0 | 4.42e-01 | 77.6% | 75.5% |
| 3586885 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.66 | 44.0 | 4.77e-01 | 95.5% | 80.6% |
| 5009636 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.64 | 45.0 | 4.98e-01 | 96.0% | 89.4% |
| 3744746 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.61 | 43.0 | 4.90e-01 | 100.0% | 97.9% |
| 3507434 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.61 | 42.0 | 4.91e-01 | 94.5% | 100.0% |
| 4998664 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.61 | 48.0 | 4.11e-01 | 82.1% | 91.7% |
| 3604000 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.60 | 49.0 | 4.58e-01 | 85.1% | 90.4% |
| 4287954 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.60 | 28.0 | 3.55e-01 | 95.0% | 73.9% |
| 5077950 | 2007.1.11.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains › Fucose_iso_N1 | 0.59 | 41.0 | 4.78e-01 | 78.6% | 97.9% |
| 4979885 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.59 | 49.0 | 4.23e-01 | 85.6% | 92.3% |
| 4486883 | 2004.1.1.453 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, NOG1 | 0.59 | 45.0 | 4.15e-01 | 78.6% | 69.4% |
| 3718701 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.58 | 44.0 | 3.42e-01 | 78.6% | 37.9% |
| 3379400 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.57 | 43.0 | 4.27e-01 | 78.6% | 80.9% |
| 4388212 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.56 | 45.0 | 3.53e-01 | 82.1% | 69.6% |
| None | — | 0.56 | 44.0 | 3.72e-01 | 81.1% | 82.4% | |
| None | — | 0.56 | 44.0 | 3.72e-01 | 81.1% | 82.7% | |
| 4995652 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.56 | 44.0 | 3.52e-01 | 89.1% | 43.2% |
| 5064542 | 2004.1.1.86 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FeoB_N | 0.55 | 42.0 | 4.20e-01 | 78.6% | 95.1% |
| 4961956 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.55 | 43.0 | 3.68e-01 | 82.1% | 85.0% |
| 4954366 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.54 | 43.0 | 4.03e-01 | 90.5% | 67.9% |
| None | — | 0.54 | 44.0 | 3.80e-01 | 89.6% | 54.6% | |
| 5049787 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.53 | 44.0 | 3.72e-01 | 89.6% | 53.2% |
| 5050328 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.53 | 42.0 | 3.61e-01 | 99.5% | 52.6% |
| 3839579 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.53 | 43.0 | 3.49e-01 | 90.5% | 45.9% |
| 5028253 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 42.0 | 4.57e-01 | 99.5% | 98.8% |
| 3106945 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.53 | 43.0 | 3.80e-01 | 89.6% | 58.7% |
| 3970600 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.52 | 47.0 | 4.79e-01 | 95.0% | 99.0% |
| 3169672 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.52 | 45.0 | 3.96e-01 | 91.0% | 63.5% |
| 4996410 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 42.0 | 4.47e-01 | 98.5% | 98.3% |
| 3949426 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.51 | 33.0 | 3.24e-01 | 83.1% | 56.4% |
| 4999944 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.51 | 42.0 | 4.48e-01 | 98.5% | 97.8% |
| 5035349 | 2002.1.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RuBisCO_large | 0.51 | 45.0 | 3.92e-01 | 100.0% | 62.3% |
| 5012040 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.51 | 32.0 | 3.25e-01 | 89.1% | 62.1% |
| 4945154 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.50 | 41.0 | 4.40e-01 | 99.5% | 98.9% |
| 4947551 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 47.0 | 4.54e-01 | 100.0% | 98.6% |
| 4936061 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.50 | 30.0 | 3.11e-01 | 79.6% | 58.5% |
D2
high
residues 86-186
Domain cluster:
rep: MW073100.1__QWT28899.1__vBMoxSR1_gp49__00049__D318-402
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 70.0 | 6.56e-01 | 100.0% | 85.1% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.71 | 41.0 | 4.89e-01 | 88.1% | 83.1% |
| 5dx9A01 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.66 | 36.0 | 4.13e-01 | 79.2% | 72.2% |
| 1el6A03 | 3.90.1160.10 | Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain | 0.66 | 59.0 | 5.77e-01 | 100.0% | 90.8% |
| 3va7A05 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.63 | 42.0 | 4.30e-01 | 89.1% | 69.0% |
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 4.80e-01 | 98.0% | 90.6% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 38.0 | 4.05e-01 | 100.0% | 74.1% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 35.0 | 3.96e-01 | 81.2% | 77.3% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 50.0 | 4.73e-01 | 91.1% | 87.4% |
| 1nlqE00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.58 | 39.0 | 4.03e-01 | 100.0% | 72.4% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 42.0 | 4.30e-01 | 76.2% | 100.0% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 36.0 | 3.56e-01 | 100.0% | 56.8% |
| 4icwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 42.0 | 3.94e-01 | 78.2% | 100.0% |
| 3pl0B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.57 | 39.0 | 2.95e-01 | 100.0% | 28.6% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.32e-01 | 97.0% | 86.7% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.42e-01 | 97.0% | 90.0% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 40.0 | 3.83e-01 | 100.0% | 64.7% |
| 3l9bA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 41.0 | 3.85e-01 | 80.2% | 100.0% |
| 3t66A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 46.0 | 3.39e-01 | 91.1% | 45.9% |
| 3jzyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 40.0 | 3.75e-01 | 79.2% | 98.4% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.87e-01 | 100.0% | 61.6% |
| 4npjB01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 39.0 | 3.58e-01 | 79.2% | 86.4% |
| 1y6kR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.10e-01 | 97.0% | 82.4% |
| 8a28A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 3.63e-01 | 100.0% | 58.5% |
| 4npjB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 37.0 | 3.32e-01 | 72.3% | 53.5% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 4.09e-01 | 96.0% | 87.9% |
| 6x5vA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 4.31e-01 | 98.0% | 91.7% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 36.0 | 2.98e-01 | 100.0% | 39.2% |
| 1nlrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.52 | 45.0 | 3.60e-01 | 100.0% | 64.4% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 39.0 | 3.96e-01 | 98.0% | 80.2% |
| 4pqqA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 41.0 | 3.64e-01 | 100.0% | 57.1% |
| 2jqzA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 38.0 | 3.55e-01 | 79.2% | 98.5% |
| 7a1rA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 38.0 | 3.62e-01 | 78.2% | 99.2% |
| 5zruA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 3.94e-01 | 99.0% | 92.9% |
| 3s7iB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 2.97e-01 | 72.3% | 74.1% |
| 3ng0A02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.50 | 41.0 | 2.89e-01 | 91.1% | 73.1% |
| 2d9rA00 | 2.40.30.100 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like | 0.50 | 37.0 | 3.99e-01 | 86.1% | 95.3% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 39.0 | 3.64e-01 | 100.0% | 66.2% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048091 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.69 | 44.0 | 2.85e-01 | 81.2% | 15.5% |
| 3839595 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.67 | 62.0 | 6.03e-01 | 100.0% | 91.8% |
| 270234 | 3019.1.1.2 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › GP11 | 0.66 | 59.0 | 5.85e-01 | 100.0% | 94.3% |
| 4168395 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.66 | 60.0 | 5.64e-01 | 100.0% | 92.5% |
| 3978660 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.66 | 42.0 | 4.33e-01 | 95.0% | 68.4% |
| 4096826 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.65 | 59.0 | 5.74e-01 | 100.0% | 95.5% |
| 4909079 | 3019.1.1.9 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › FliD_C, Flagellin_IN | 0.64 | 57.0 | 5.47e-01 | 99.0% | 87.4% |
| 3223402 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 42.0 | 4.31e-01 | 96.0% | 70.0% |
| 4078982 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.62 | 55.0 | 5.12e-01 | 100.0% | 96.2% |
| 3960521 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.62 | 39.0 | 4.16e-01 | 97.0% | 72.2% |
| 4307366 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.59 | 53.0 | 5.18e-01 | 100.0% | 92.7% |
| 3974247 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 35.0 | 3.24e-01 | 100.0% | 43.7% |
| 4940471 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.59 | 41.0 | 4.28e-01 | 97.0% | 81.1% |
| 3479920 | 11.2.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI | 0.57 | 46.0 | 3.79e-01 | 87.1% | 85.9% |
| 3477113 | 11.2.1.24 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › SPATA6 | 0.57 | 41.0 | 3.73e-01 | 76.2% | 100.0% |
| 4481648 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.57 | 51.0 | 4.86e-01 | 100.0% | 95.0% |
| 4668792 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.57 | 39.0 | 3.93e-01 | 100.0% | 70.0% |
| 3718154 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.57 | 44.0 | 3.98e-01 | 84.2% | 91.0% |
| 3955717 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.57 | 48.0 | 4.49e-01 | 92.1% | 77.6% |
| 3265744 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.57 | 38.0 | 4.02e-01 | 100.0% | 77.8% |
| 4029682 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 44.0 | 3.66e-01 | 84.2% | 88.1% |
| 3263789 | 310.1.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain | 0.57 | 38.0 | 3.75e-01 | 77.2% | 63.6% |
| 4506741 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 41.0 | 4.32e-01 | 97.0% | 86.7% |
| 3405984 | 11.2.1.24 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › SPATA6 | 0.56 | 43.0 | 3.93e-01 | 83.2% | 100.0% |
| 3907339 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.56 | 50.0 | 3.81e-01 | 100.0% | 53.5% |
| 4027344 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 41.0 | 3.88e-01 | 76.2% | 100.0% |
| 3571208 | 11.2.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI | 0.56 | 44.0 | 3.93e-01 | 87.1% | 100.0% |
| 3738074 | 3012.1.1.1 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase | 0.55 | 37.0 | 3.89e-01 | 91.1% | 76.7% |
| 3474329 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 40.0 | 3.70e-01 | 77.2% | 95.6% |
| 3920761 | 11.2.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI | 0.55 | 44.0 | 3.77e-01 | 87.1% | 95.2% |
| 3535563 | 11.2.1.43 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI | 0.55 | 44.0 | 3.80e-01 | 88.1% | 93.9% |
| 3232214 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.55 | 45.0 | 3.91e-01 | 92.1% | 94.5% |
| 4109482 | 223.1.1.182 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3369 | 0.55 | 38.0 | 3.21e-01 | 71.3% | 84.1% |
| 3348395 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.54 | 39.0 | 3.90e-01 | 100.0% | 73.3% |
| 3998369 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 42.0 | 3.66e-01 | 83.2% | 91.6% |
| 3489211 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 42.0 | 4.01e-01 | 100.0% | 70.8% |
| 3998366 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 40.0 | 3.55e-01 | 80.2% | 94.2% |
| 3869216 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.54 | 40.0 | 3.72e-01 | 81.2% | 95.6% |
| 3937893 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 44.0 | 3.77e-01 | 91.1% | 94.5% |
| 3892017 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 37.0 | 3.25e-01 | 73.3% | 48.7% |
| 5058689 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 41.0 | 4.11e-01 | 100.0% | 84.0% |
| 5078283 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.35e-01 | 96.0% | 88.6% |
| 3317099 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 41.0 | 3.63e-01 | 85.1% | 92.7% |
| 4940470 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.52 | 40.0 | 4.16e-01 | 97.0% | 93.3% |
| 3390097 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 41.0 | 3.56e-01 | 87.1% | 91.3% |
| 3831284 | 207.1.1.465 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3, LRR_4 | 0.51 | 45.0 | 2.96e-01 | 99.0% | 23.0% |
| 3825156 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.51 | 36.0 | 3.73e-01 | 100.0% | 80.0% |
| 4028146 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 45.0 | 3.96e-01 | 99.0% | 88.7% |
| 3390096 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 38.0 | 3.61e-01 | 81.2% | 97.6% |
| 3833446 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 45.0 | 2.69e-01 | 100.0% | 13.8% |
| 3740170 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 41.0 | 3.73e-01 | 95.0% | 65.9% |
| 3949550 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.50 | 42.0 | 3.77e-01 | 94.1% | 92.0% |
| 5027599 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 41.0 | 4.08e-01 | 90.1% | 83.3% |
| 3309702 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.50 | 44.0 | 2.80e-01 | 99.0% | 22.0% |
| 4869676 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.50 | 45.0 | 3.53e-01 | 100.0% | 54.7% |
D3
medium
residues 375-471
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yx1A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 29.0 | 3.42e-01 | 71.1% | 57.6% |
| 3ewgA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.63 | 30.0 | 3.32e-01 | 78.4% | 52.5% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 35.0 | 3.38e-01 | 80.4% | 46.4% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 29.0 | 2.95e-01 | 72.2% | 43.0% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 30.0 | 3.04e-01 | 81.4% | 46.0% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.57 | 23.0 | 2.72e-01 | 71.1% | 46.4% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.56 | 35.0 | 3.73e-01 | 81.4% | 73.2% |
| 2kyyA00 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.53 | 31.0 | 2.67e-01 | 76.3% | 34.6% |
| 2hezA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.52 | 30.0 | 2.12e-01 | 77.3% | 17.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945698 | 283.2.1.10 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 | 0.91 | 67.0 | 6.58e-01 | 93.8% | 71.2% |
| 4988099 | 283.2.1.10 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 | 0.84 | 63.0 | 5.86e-01 | 82.5% | 63.9% |
| 3697768 | 872.4.1.0 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like | 0.64 | 31.0 | 4.07e-01 | 77.3% | 95.6% |
| 4979949 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 29.0 | 3.14e-01 | 76.3% | 51.2% |
| 5077308 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.60 | 29.0 | 2.90e-01 | 74.2% | 40.0% |
| 1278602 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.60 | 31.0 | 3.79e-01 | 77.3% | 80.0% |
| 4993179 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.59 | 27.0 | 2.79e-01 | 73.2% | 40.0% |
| 4943800 | 304.4.1.81 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Arc_trans_TRASH | 0.58 | 27.0 | 2.78e-01 | 72.2% | 40.0% |
| 3410445 | 627.1.1.4 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › PF26202 | 0.53 | 37.0 | 3.25e-01 | 71.1% | 52.1% |