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NC_020866.1__YP_007676387.1__RHVG_00008__00008
Bact-VirNC_020866.1__YP_007676387.1__RHVG_00008__00008
Identity
- Accession:
- NC_020866 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-60
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02316.23 best | HTH_Tnp_Mu_1 | 40.9 | 4.00e-10 | 89.1% | 31.3% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 55.0 | 5.35e-01 | 98.2% | 71.0% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 56.0 | 4.71e-01 | 98.2% | 48.4% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 54.0 | 5.09e-01 | 98.2% | 66.7% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 4.84e-01 | 98.2% | 68.2% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 4.28e-01 | 98.2% | 48.4% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.89e-01 | 100.0% | 61.9% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 4.99e-01 | 98.2% | 76.6% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.95e-01 | 98.2% | 76.6% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 4.03e-01 | 100.0% | 38.1% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.16e-01 | 96.4% | 48.1% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 4.37e-01 | 100.0% | 55.3% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.48e-01 | 100.0% | 59.8% |
| 1oyiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.39e-01 | 98.2% | 71.0% |
| 1ucrB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.22e-01 | 98.2% | 61.3% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 4.22e-01 | 100.0% | 55.9% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 3.74e-01 | 100.0% | 36.4% |
| 1xmkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.19e-01 | 96.4% | 60.8% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.10e-01 | 98.2% | 57.1% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.00e-01 | 100.0% | 51.5% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.21e-01 | 100.0% | 59.8% |
| 1fp2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.13e-01 | 100.0% | 55.2% |
| 4chuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 51.0 | 3.95e-01 | 100.0% | 69.8% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.11e-01 | 98.2% | 61.0% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.26e-01 | 98.2% | 66.7% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.72e-01 | 92.7% | 54.7% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 4.07e-01 | 98.2% | 60.7% |
| 3f6oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.74e-01 | 96.4% | 50.5% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.59e-01 | 98.2% | 47.8% |
| 3h0dA01 | 3.30.56.130 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain | 0.58 | 44.0 | 4.16e-01 | 98.2% | 67.6% |
| 1z6tA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.96e-01 | 96.4% | 57.6% |
| 3htuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.28e-01 | 96.4% | 70.7% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 44.0 | 3.01e-01 | 87.3% | 71.2% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 3.77e-01 | 100.0% | 47.7% |
| 2ctoA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 41.0 | 4.07e-01 | 81.8% | 78.7% |
| 7kpsB01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 44.0 | 3.26e-01 | 96.4% | 43.0% |
| 2a07J00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 4.23e-01 | 100.0% | 68.7% |
| 4ad9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 4.04e-01 | 96.4% | 63.1% |
| 7bqiA01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.54 | 38.0 | 2.89e-01 | 78.2% | 86.8% |
| 6psyA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 40.0 | 2.79e-01 | 90.9% | 97.4% |
| 4bpe700 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 3.72e-01 | 100.0% | 68.3% |
| 5ly3A02 | 3.30.420.570 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 37.0 | 2.58e-01 | 81.8% | 49.1% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 33.0 | 3.05e-01 | 92.7% | 49.3% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.51 | 36.0 | 3.20e-01 | 81.8% | 95.7% |
| 5optn00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.59e-01 | 100.0% | 66.7% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.54e-01 | 100.0% | 63.5% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4547857 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.76 | 67.0 | 5.89e-01 | 100.0% | 67.5% |
| 4992529 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 56.0 | 4.76e-01 | 98.2% | 50.0% |
| 4527065 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.70 | 52.0 | 3.81e-01 | 98.2% | 30.3% |
| 3716691 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 52.0 | 4.75e-01 | 98.2% | 60.0% |
| 5053414 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.69 | 51.0 | 3.96e-01 | 98.2% | 34.6% |
| 4975936 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.69 | 51.0 | 4.63e-01 | 98.2% | 58.7% |
| 5024615 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.69 | 50.0 | 4.66e-01 | 96.4% | 61.4% |
| 4948233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 50.0 | 4.25e-01 | 98.2% | 47.4% |
| 1518902 | 101.1.2.53 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mnd1 | 0.67 | 52.0 | 4.96e-01 | 98.2% | 71.6% |
| 4034017 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.67 | 52.0 | 4.43e-01 | 100.0% | 52.2% |
| 3281272 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.66 | 50.0 | 3.84e-01 | 96.4% | 36.0% |
| 4991142 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.65 | 50.0 | 4.49e-01 | 100.0% | 58.7% |
| 3589863 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.64 | 50.0 | 4.28e-01 | 98.2% | 52.2% |
| 4959159 | 101.1.2.109 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rio2_N | 0.64 | 54.0 | 4.66e-01 | 100.0% | 60.0% |
| 4008670 | 101.1.2.783 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30336 | 0.64 | 48.0 | 4.52e-01 | 92.7% | 67.1% |
| 5011180 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 48.0 | 4.51e-01 | 98.2% | 66.2% |
| 4978855 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.64 | 55.0 | 4.33e-01 | 100.0% | 50.0% |
| 5030237 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 56.0 | 4.95e-01 | 100.0% | 68.8% |
| 4007720 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 4.24e-01 | 96.4% | 61.3% |
| 4994131 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 4.06e-01 | 98.2% | 46.4% |
| 3603567 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.62 | 51.0 | 4.74e-01 | 100.0% | 72.9% |
| 3602448 | 192.8.1.449 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF7343 | 0.61 | 44.0 | 3.05e-01 | 98.2% | 21.6% |
| 5079485 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 52.0 | 4.37e-01 | 100.0% | 64.0% |
| 4956611 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.61 | 46.0 | 4.14e-01 | 96.4% | 56.5% |
| 3286661 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.61 | 48.0 | 3.72e-01 | 96.4% | 38.4% |
| 5050479 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.20e-01 | 100.0% | 55.6% |
| 4990436 | 101.1.2.109 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rio2_N | 0.60 | 45.0 | 4.17e-01 | 100.0% | 62.7% |
| 4970916 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 4.20e-01 | 100.0% | 61.0% |
| 4561700 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.60 | 44.0 | 3.84e-01 | 98.2% | 50.0% |
| 4997662 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 4.03e-01 | 98.2% | 50.0% |
| 4996616 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.84e-01 | 96.4% | 93.2% |
| 4955571 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.59 | 50.0 | 4.00e-01 | 96.4% | 50.4% |
| 4030960 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.59 | 52.0 | 3.90e-01 | 100.0% | 78.3% |
| 4464087 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.59 | 47.0 | 4.20e-01 | 96.4% | 61.3% |
| 5046131 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 51.0 | 4.23e-01 | 100.0% | 63.0% |
| 3168448 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.59 | 47.0 | 3.79e-01 | 98.2% | 45.7% |
| 3512685 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.58 | 46.0 | 3.61e-01 | 96.4% | 37.4% |
| 4156356 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.58 | 46.0 | 3.96e-01 | 92.7% | 54.4% |
| 3461177 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.58 | 48.0 | 4.09e-01 | 100.0% | 55.0% |
| 3289961 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.58 | 51.0 | 4.12e-01 | 98.2% | 81.7% |
| 4008398 | 101.1.2.583 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27264 | 0.58 | 44.0 | 4.13e-01 | 94.5% | 68.6% |
| 5065392 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.57 | 48.0 | 3.98e-01 | 98.2% | 51.4% |
| 4261796 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 49.0 | 4.12e-01 | 100.0% | 58.0% |
| 4299003 | 2498.1.1.103 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SpoVR | 0.57 | 40.0 | 2.66e-01 | 76.4% | 19.6% |
| 3440366 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.57 | 43.0 | 3.97e-01 | 92.7% | 84.7% |
| 3967829 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.57 | 49.0 | 3.74e-01 | 100.0% | 40.7% |
| 3507701 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.57 | 47.0 | 3.79e-01 | 100.0% | 62.5% |
| 3960386 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 50.0 | 4.87e-01 | 100.0% | 90.0% |
| 4360928 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.56 | 41.0 | 3.94e-01 | 92.7% | 65.7% |
| 4879386 | 101.1.2.93 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Mga | 0.56 | 43.0 | 3.89e-01 | 96.4% | 60.3% |
| 3731219 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.56 | 45.0 | 3.69e-01 | 100.0% | 48.0% |
| 3364027 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.56 | 41.0 | 2.85e-01 | 98.2% | 21.4% |
| 3474961 | 3525.1.1.0 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain | 0.55 | 44.0 | 3.92e-01 | 89.1% | 66.3% |
| 3981752 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.55 | 49.0 | 3.67e-01 | 98.2% | 59.2% |
| 4964858 | 2498.1.1.103 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SpoVR | 0.55 | 40.0 | 2.55e-01 | 80.0% | 36.6% |
| 4506359 | 101.1.2.751 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6293_C | 0.54 | 44.0 | 3.99e-01 | 100.0% | 74.1% |
| 2831815 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.54 | 45.0 | 4.03e-01 | 98.2% | 69.1% |
| 3600806 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 44.0 | 4.19e-01 | 98.2% | 78.5% |
| 4862320 | 101.1.2.47 ↗ | alpha arrays › HTH › HTH › winged helix domain › S10_plectin | 0.53 | 43.0 | 3.63e-01 | 98.2% | 52.1% |
| 1414926 | 101.1.2.224 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6945 | 0.53 | 38.0 | 3.17e-01 | 98.2% | 39.1% |
| 3493298 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.53 | 42.0 | 3.14e-01 | 96.4% | 53.5% |
| 3519165 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.79e-01 | 96.4% | 67.1% |
| 3637312 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 38.0 | 2.23e-01 | 78.2% | 14.9% |
| 3503110 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 4.37e-01 | 96.4% | 95.0% |
| 3979499 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.53 | 43.0 | 3.66e-01 | 98.2% | 54.7% |
| 5028855 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.63e-01 | 92.7% | 62.4% |
D2
high
residues 70-169
Domain cluster:
rep: AB916497.1__BAS32804.1__X__00006__D107-184
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 32.0 | 3.78e-01 | 81.0% | 73.0% |
| 7wvzA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 41.0 | 2.73e-01 | 79.0% | 17.2% |
| 3c02A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.58 | 41.0 | 3.10e-01 | 73.0% | 81.4% |
| 3kcuD00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.58 | 43.0 | 3.24e-01 | 78.0% | 91.1% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.57 | 45.0 | 3.22e-01 | 85.0% | 91.0% |
| 2e2oA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 45.0 | 3.85e-01 | 87.0% | 95.2% |
| 3fk5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 42.0 | 3.79e-01 | 84.0% | 56.4% |
| 8cuyA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 43.0 | 2.86e-01 | 85.0% | 36.8% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.54 | 38.0 | 4.11e-01 | 73.0% | 100.0% |
| 1t5oA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.54 | 45.0 | 4.08e-01 | 93.0% | 70.9% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 45.0 | 3.67e-01 | 100.0% | 73.5% |
| 3rrcB01 | 1.20.1310.20 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain | 0.51 | 41.0 | 3.59e-01 | 87.0% | 81.6% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.51 | 43.0 | 3.89e-01 | 93.0% | 68.6% |
| 1m7wA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 42.0 | 3.36e-01 | 93.0% | 87.4% |
| 1vb5A01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.51 | 43.0 | 4.43e-01 | 95.0% | 100.0% |
| 4g2tA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 41.0 | 3.34e-01 | 90.0% | 73.7% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.51 | 38.0 | 3.64e-01 | 80.0% | 87.4% |
| 1tqyB01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 40.0 | 3.02e-01 | 86.0% | 58.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3726085 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.69 | 43.0 | 4.62e-01 | 72.0% | 74.1% |
| 3963308 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.60 | 39.0 | 4.15e-01 | 100.0% | 74.4% |
| 4035830 | 1161.1.1.1 ↗ | alpha duplicates or obligate multimers › IreB › IreB › IreB › IreB | 0.59 | 42.0 | 4.61e-01 | 74.0% | 92.5% |
| 2056496 | 4250.1.1.1 ↗ | alpha bundles › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy_binding | 0.57 | 45.0 | 3.84e-01 | 86.0% | 82.7% |
| 3989092 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.56 | 47.0 | 3.87e-01 | 92.0% | 98.4% |
| 4855206 | 2003.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N | 0.55 | 36.0 | 3.27e-01 | 82.0% | 45.5% |
| 3988537 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.55 | 47.0 | 3.82e-01 | 96.0% | 95.0% |
| 3741452 | 3881.1.1.1 ↗ | alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 | 0.55 | 49.0 | 3.76e-01 | 99.0% | 76.0% |
| 3591561 | 3881.1.1.1 ↗ | alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 | 0.54 | 49.0 | 3.82e-01 | 100.0% | 83.3% |
| 3675163 | 3881.1.1.1 ↗ | alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 | 0.53 | 47.0 | 3.83e-01 | 99.0% | 99.0% |
| 4980541 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.53 | 46.0 | 3.49e-01 | 100.0% | 47.7% |
| 3944331 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.53 | 29.0 | 3.15e-01 | 74.0% | 63.7% |
| 5065355 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.52 | 42.0 | 2.70e-01 | 85.0% | 52.3% |
| 5073302 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.52 | 39.0 | 3.49e-01 | 78.0% | 57.9% |
| 3979143 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.51 | 44.0 | 4.01e-01 | 95.0% | 86.7% |
| 4194017 | 1161.1.1.1 ↗ | alpha duplicates or obligate multimers › IreB › IreB › IreB › IreB | 0.51 | 36.0 | 3.88e-01 | 76.0% | 91.3% |
| 4990527 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 33.0 | 3.20e-01 | 92.0% | 55.0% |
| 3263033 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.51 | 35.0 | 3.42e-01 | 71.0% | 74.5% |
| None | — | 0.50 | 38.0 | 4.08e-01 | 82.0% | 94.3% |
D3
high
residues 178-254
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 54.0 | 6.11e-01 | 71.4% | 89.7% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 49.0 | 5.65e-01 | 87.0% | 92.7% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 49.0 | 5.65e-01 | 88.3% | 98.1% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 4.86e-01 | 79.2% | 82.4% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.68 | 52.0 | 4.78e-01 | 80.5% | 67.0% |
| 1p5zB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 46.0 | 3.30e-01 | 75.3% | 86.5% |
| 2mbfA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 5.12e-01 | 96.1% | 100.0% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.81e-01 | 84.4% | 92.9% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.94e-01 | 89.6% | 98.4% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.60 | 43.0 | 4.04e-01 | 76.6% | 82.8% |
| 4ad9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.79e-01 | 89.6% | 90.5% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 40.0 | 4.25e-01 | 90.9% | 80.9% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.59 | 46.0 | 4.74e-01 | 90.9% | 94.5% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 41.0 | 4.27e-01 | 76.6% | 100.0% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.55 | 40.0 | 3.47e-01 | 81.8% | 46.6% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 38.0 | 3.46e-01 | 74.0% | 98.2% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 37.0 | 3.72e-01 | 71.4% | 79.0% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.53 | 43.0 | 4.08e-01 | 93.5% | 88.7% |
| 4hhyC01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.53 | 44.0 | 3.81e-01 | 98.7% | 80.9% |
| 3nhiA01 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.53 | 37.0 | 3.04e-01 | 74.0% | 88.6% |
| 4l7nA01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.51 | 44.0 | 3.68e-01 | 100.0% | 69.9% |
| 4uiqB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 44.0 | 3.57e-01 | 98.7% | 61.4% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3909922 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.87 | 56.0 | 6.80e-01 | 75.3% | 100.0% |
| 4011476 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 61.0 | 6.25e-01 | 81.8% | 77.3% |
| 4017824 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.82 | 61.0 | 6.25e-01 | 100.0% | 80.0% |
| 3203378 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 55.0 | 5.94e-01 | 83.1% | 84.6% |
| 3663044 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.77 | 49.0 | 5.02e-01 | 70.1% | 66.7% |
| 4979322 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.77 | 57.0 | 5.97e-01 | 89.6% | 85.7% |
| 4438245 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.75 | 49.0 | 4.58e-01 | 71.4% | 54.7% |
| 3576763 | 101.1.1.332 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nucleolin_bd | 0.74 | 52.0 | 5.61e-01 | 72.7% | 87.7% |
| 3519665 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 54.0 | 5.16e-01 | 84.4% | 67.8% |
| 5075437 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.73 | 50.0 | 5.25e-01 | 87.0% | 78.6% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.68 | 52.0 | 5.26e-01 | 84.4% | 85.3% |
| 3810002 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.68 | 50.0 | 4.43e-01 | 77.9% | 77.3% |
| 3781503 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 43.0 | 4.76e-01 | 74.0% | 90.9% |
| 3502186 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 5.08e-01 | 88.3% | 93.3% |
| 3236431 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 50.0 | 5.16e-01 | 100.0% | 91.4% |
| 3822451 | 101.33.1.1 ↗ | alpha arrays › HTH › Replication foci-targeting sequence C-terminal domain › Replication foci-targeting sequence C-terminal domain › DNMT1-RFD | 0.66 | 54.0 | 4.56e-01 | 90.9% | 60.0% |
| 3907738 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 52.0 | 5.44e-01 | 100.0% | 97.1% |
| 3786670 | 592.1.1.2 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI | 0.65 | 52.0 | 4.90e-01 | 98.7% | 71.6% |
| 3255248 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.64 | 47.0 | 4.87e-01 | 77.9% | 88.6% |
| 4386395 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.64 | 47.0 | 4.37e-01 | 79.2% | 99.0% |
| 3924719 | 371.1.1.0 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 | 0.64 | 44.0 | 4.17e-01 | 72.7% | 97.9% |
| 3807187 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 49.0 | 3.99e-01 | 89.6% | 42.6% |
| 4080077 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.63 | 46.0 | 4.15e-01 | 77.9% | 76.2% |
| 5027755 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 51.0 | 5.07e-01 | 94.8% | 95.0% |
D4
high
residues 652-704
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lujB01 | 1.10.10.490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT | 0.76 | 58.0 | 5.83e-01 | 86.8% | 81.1% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 57.0 | 4.90e-01 | 88.7% | 73.8% |
| 6vg5A00 | 1.10.10.930 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 50.0 | 4.53e-01 | 92.5% | 59.3% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.63 | 47.0 | 4.37e-01 | 90.6% | 61.6% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 43.0 | 3.26e-01 | 73.6% | 31.4% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.62 | 54.0 | 4.61e-01 | 96.2% | 61.2% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 45.0 | 4.09e-01 | 83.0% | 55.1% |
| 1ym3A00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.60 | 51.0 | 3.56e-01 | 100.0% | 99.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 42.0 | 3.77e-01 | 75.5% | 53.3% |
| 1a9nC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.56 | 41.0 | 3.01e-01 | 84.9% | 27.6% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 38.0 | 3.00e-01 | 75.5% | 30.2% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.03e-01 | 96.2% | 61.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 39.0 | 3.88e-01 | 77.4% | 86.2% |
| 3mcqA02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.54 | 44.0 | 3.25e-01 | 100.0% | 59.5% |
| 1uujA00 | 1.20.960.30 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.54 | 46.0 | 4.06e-01 | 96.2% | 65.8% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 3.58e-01 | 100.0% | 81.7% |
| 4ap9A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.53 | 40.0 | 3.84e-01 | 81.1% | 75.0% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 2.97e-01 | 98.1% | 94.5% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 36.0 | 3.15e-01 | 100.0% | 50.0% |
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.52 | 41.0 | 3.35e-01 | 86.8% | 85.0% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.50 | 38.0 | 3.13e-01 | 83.0% | 65.3% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3583169 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.86 | 60.0 | 5.16e-01 | 77.4% | 48.8% |
| 3844040 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.83 | 60.0 | 5.56e-01 | 79.2% | 61.5% |
| 3203010 | 605.1.1.139 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › LETM1_RBD | 0.79 | 57.0 | 4.55e-01 | 75.5% | 40.0% |
| 3600746 | 109.4.1.1554 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TARBP1 | 0.78 | 69.0 | 3.60e-01 | 98.1% | 3.2% |
| 3314803 | 632.7.1.37 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › LETM1_RBD | 0.75 | 57.0 | 4.34e-01 | 81.1% | 35.8% |
| 3948631 | 192.29.1.56 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › YihI | 0.74 | 54.0 | 5.37e-01 | 75.5% | 72.7% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 52.0 | 5.14e-01 | 75.5% | 74.5% |
| 3185917 | 375.1.9.12 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Wbp11 | 0.72 | 51.0 | 4.38e-01 | 75.5% | 48.2% |
| 3204035 | 1.1.17.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 | 0.70 | 50.0 | 3.05e-01 | 75.5% | 12.6% |
| 4098321 | 2004.1.1.494 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 | 0.70 | 58.0 | 3.38e-01 | 94.3% | 11.2% |
| 4465406 | 2004.1.1.569 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N | 0.68 | 55.0 | 3.06e-01 | 92.5% | 6.6% |
| 4336048 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 54.0 | 2.91e-01 | 92.5% | 4.2% |
| None | — | 0.68 | 54.0 | 2.91e-01 | 92.5% | 4.3% | |
| 4165355 | 2004.1.1.494 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 | 0.67 | 53.0 | 3.03e-01 | 92.5% | 7.6% |
| 3489734 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.67 | 54.0 | 4.88e-01 | 98.1% | 62.5% |
| 4034349 | 2004.1.1.569 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N | 0.67 | 53.0 | 2.97e-01 | 92.5% | 6.4% |
| 5040578 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.67 | 49.0 | 4.65e-01 | 79.2% | 69.2% |
| 4241568 | 2004.1.1.492 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C, ADDB_N, PF27467 | 0.67 | 53.0 | 2.96e-01 | 92.5% | 6.4% |
| 3819624 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.66 | 44.0 | 3.07e-01 | 73.6% | 20.0% |
| 4183514 | 2004.1.1.412 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AddB_5th | 0.66 | 56.0 | 3.25e-01 | 94.3% | 11.0% |
| 4593468 | 2004.1.1.494 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 | 0.66 | 52.0 | 2.89e-01 | 92.5% | 6.4% |
| 3605439 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.66 | 46.0 | 4.18e-01 | 73.6% | 65.7% |
| 3644581 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.65 | 46.0 | 3.08e-01 | 79.2% | 18.6% |
| 3300364 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.65 | 49.0 | 3.30e-01 | 83.0% | 20.5% |
| 3182103 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.65 | 53.0 | 3.19e-01 | 90.6% | 29.9% |
| 4024538 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.65 | 52.0 | 3.61e-01 | 96.2% | 25.8% |
| 3941457 | 1203.1.2.3 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › YiaAB | 0.64 | 55.0 | 4.23e-01 | 96.2% | 60.0% |
| 3467202 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.63 | 43.0 | 3.67e-01 | 73.6% | 40.0% |
| 4323004 | 2004.1.1.494 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N, PF27467 | 0.63 | 48.0 | 2.70e-01 | 92.5% | 6.4% |
| 3497418 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 47.0 | 3.87e-01 | 81.1% | 67.0% |
| 3808208 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.61 | 44.0 | 3.24e-01 | 77.4% | 48.7% |
| 3840952 | 601.19.1.39 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C | 0.61 | 43.0 | 3.87e-01 | 75.5% | 88.0% |
| 4980796 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.61 | 50.0 | 3.81e-01 | 96.2% | 90.7% |
| 3318819 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 41.0 | 2.96e-01 | 73.6% | 21.1% |
| 3377172 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.60 | 42.0 | 3.24e-01 | 79.2% | 29.6% |
| 3351963 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.60 | 42.0 | 2.49e-01 | 73.6% | 8.9% |
| 3802549 | 109.4.1.1519 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.59 | 43.0 | 2.65e-01 | 77.4% | 21.2% |
| 3815515 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.59 | 47.0 | 3.33e-01 | 96.2% | 26.5% |
| 3649300 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.59 | 42.0 | 3.42e-01 | 79.2% | 36.4% |
| 3458099 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 41.0 | 3.01e-01 | 79.2% | 24.2% |
| 3376083 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.58 | 39.0 | 3.05e-01 | 73.6% | 28.5% |
| 3303408 | 109.59.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain | 0.57 | 40.0 | 3.81e-01 | 79.2% | 61.5% |
| 3340219 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.56 | 39.0 | 2.87e-01 | 71.7% | 31.4% |
| 1551399 | 4982.2.1.1 ↗ | alpha arrays › KaiA/RbsU domain-like › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mrpl_C | 0.56 | 45.0 | 3.80e-01 | 96.2% | 63.7% |
| 4177674 | 4992.1.1.23 ↗ | extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N | 0.56 | 41.0 | 3.29e-01 | 75.5% | 38.2% |
| 3592458 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 42.0 | 2.52e-01 | 86.8% | 9.8% |
| 5080625 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 45.0 | 3.57e-01 | 92.5% | 46.1% |
| 3817217 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.55 | 42.0 | 2.88e-01 | 84.9% | 48.7% |
| 3370906 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.54 | 40.0 | 2.53e-01 | 86.8% | 12.9% |
| 3625998 | 108.1.1.21 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › SPARC_Ca_bdg | 0.53 | 44.0 | 3.40e-01 | 98.1% | 58.5% |
| 3806399 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.50 | 40.0 | 2.97e-01 | 88.7% | 50.0% |
| 3821378 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.50 | 41.0 | 2.58e-01 | 92.5% | 22.3% |
D5
medium
residues 267-366_438-460
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00665.33 best | rve | 47.6 | 2.40e-12 | 78.9% | 96.1% |
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.92 | 82.0 | 7.54e-01 | 91.9% | 100.0% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.91 | 78.0 | 6.98e-01 | 89.4% | 100.0% |
| 2x6nD00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.85 | 79.0 | 6.78e-01 | 95.9% | 80.3% |
| 5cz2C00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.83 | 76.0 | 6.96e-01 | 95.1% | 94.7% |
| 1asuA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.82 | 71.0 | 6.31e-01 | 88.6% | 92.0% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.81 | 77.0 | 7.07e-01 | 99.2% | 99.3% |
| 7ue1B01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.81 | 74.0 | 6.96e-01 | 95.9% | 100.0% |
| 4mdaA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.79 | 67.0 | 5.58e-01 | 88.6% | 75.0% |
| 5cr4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.76 | 63.0 | 5.12e-01 | 87.8% | 78.1% |
| 3f2kB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.74 | 63.0 | 5.44e-01 | 90.2% | 73.8% |
| 3p5jA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 57.0 | 4.88e-01 | 81.3% | 76.3% |
| 7kx7A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.70 | 56.0 | 4.61e-01 | 84.6% | 89.8% |
| 1i39A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.67 | 52.0 | 4.75e-01 | 79.7% | 85.8% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.67 | 56.0 | 4.41e-01 | 91.9% | 95.8% |
| 2o8bB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.63 | 53.0 | 4.62e-01 | 91.1% | 91.4% |
| 3l6eA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 48.0 | 4.02e-01 | 81.3% | 88.6% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 37.0 | 3.90e-01 | 84.6% | 64.9% |
| 3d2fA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 42.0 | 4.78e-01 | 75.6% | 92.5% |
| 4o1gA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 50.0 | 3.64e-01 | 86.2% | 92.6% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 47.0 | 4.66e-01 | 81.3% | 94.7% |
| 3tjrA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 46.0 | 3.68e-01 | 81.3% | 81.2% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 32.0 | 3.95e-01 | 99.2% | 85.9% |
| 4ohxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 3.63e-01 | 78.0% | 63.2% |
| 5ilgB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 46.0 | 3.60e-01 | 81.3% | 86.4% |
| 1vq2A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 44.0 | 3.97e-01 | 78.0% | 90.8% |
| 3gbvA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.37e-01 | 81.3% | 82.1% |
| 1chmA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.59 | 45.0 | 4.16e-01 | 80.5% | 75.5% |
| 5ix8A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 4.10e-01 | 79.7% | 73.6% |
| 6xy9A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 45.0 | 3.40e-01 | 81.3% | 87.3% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 45.0 | 4.45e-01 | 80.5% | 87.5% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 44.0 | 4.34e-01 | 78.9% | 96.1% |
| 2l2qA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 41.0 | 4.36e-01 | 81.3% | 84.4% |
| 1ewqA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.57 | 48.0 | 4.89e-01 | 90.2% | 94.9% |
| 5uzxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 43.0 | 3.52e-01 | 80.5% | 87.4% |
| 4zjpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 42.0 | 4.05e-01 | 78.9% | 83.3% |
| 4a0gD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.32e-01 | 80.5% | 92.2% |
| 2vlbC00 | 3.40.50.12500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 42.0 | 3.42e-01 | 78.9% | 43.6% |
| 2p6rA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 3.59e-01 | 78.0% | 68.0% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 30.0 | 3.49e-01 | 90.2% | 71.4% |
| 3no3A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.55 | 45.0 | 3.61e-01 | 86.2% | 82.8% |
| 2d13A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 41.0 | 4.30e-01 | 78.0% | 100.0% |
| 6yttA02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 42.0 | 3.75e-01 | 81.3% | 87.1% |
| 3e02A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 47.0 | 3.61e-01 | 100.0% | 96.8% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 41.0 | 3.42e-01 | 84.6% | 63.0% |
| 1vmeB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 41.0 | 3.28e-01 | 82.9% | 83.3% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 24.0 | 3.02e-01 | 71.5% | 74.2% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 24.0 | 3.03e-01 | 71.5% | 71.0% |
| 1e5tA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 46.0 | 3.30e-01 | 97.6% | 67.8% |
| 5c40B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 45.0 | 3.45e-01 | 99.2% | 84.6% |
| 4dg8A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 39.0 | 2.77e-01 | 81.3% | 28.3% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 3.35e-01 | 76.4% | 73.5% |
| 7c2xA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 47.0 | 3.57e-01 | 99.2% | 97.8% |
| 3kl7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 36.0 | 3.05e-01 | 73.2% | 91.8% |
| 4mp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.78e-01 | 89.4% | 95.4% |
| 1omoA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 42.0 | 3.75e-01 | 89.4% | 95.3% |
| 1xcjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 40.0 | 3.30e-01 | 86.2% | 100.0% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3955433 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.95 | 88.0 | 7.47e-01 | 95.1% | 91.7% |
| 4928272 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.95 | 85.0 | 7.71e-01 | 91.9% | 100.0% |
| 3947062 | 2484.1.1.194 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 | 0.92 | 88.0 | 7.27e-01 | 98.4% | 90.3% |
| 4336164 | 2484.1.1.194 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 | 0.92 | 87.0 | 7.43e-01 | 97.6% | 88.3% |
| 3420098 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.92 | 86.0 | 6.89e-01 | 96.7% | 90.2% |
| 3480819 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.92 | 85.0 | 7.50e-01 | 95.1% | 90.3% |
| 3424158 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.92 | 86.0 | 6.61e-01 | 96.7% | 80.8% |
| 3933447 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.92 | 62.0 | 6.75e-01 | 74.0% | 81.0% |
| 3970062 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.92 | 87.0 | 7.36e-01 | 98.4% | 87.6% |
| 3520727 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.91 | 86.0 | 6.85e-01 | 97.6% | 84.5% |
| 3925598 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.91 | 84.0 | 7.28e-01 | 95.9% | 89.1% |
| 3531857 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 84.0 | 7.25e-01 | 95.9% | 89.7% |
| 3934731 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 83.0 | 7.26e-01 | 95.1% | 87.6% |
| 3252345 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 84.0 | 6.68e-01 | 97.6% | 86.2% |
| 3175241 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 82.0 | 7.06e-01 | 95.1% | 90.0% |
| 5084008 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 87.0 | 7.41e-01 | 100.0% | 91.1% |
| 3882852 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 84.0 | 6.72e-01 | 97.6% | 84.5% |
| 3932932 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 65.0 | 7.06e-01 | 74.0% | 89.5% |
| 3939024 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 84.0 | 6.70e-01 | 97.6% | 84.1% |
| 3923747 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 84.0 | 6.75e-01 | 97.6% | 85.1% |
| 3926535 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.90 | 70.0 | 7.00e-01 | 81.3% | 79.2% |
| 3888097 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.16e-01 | 97.6% | 65.4% |
| 3980553 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 64.0 | 7.00e-01 | 74.8% | 86.7% |
| 3931350 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.71e-01 | 97.6% | 87.0% |
| 3926417 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 80.0 | 7.22e-01 | 93.5% | 98.1% |
| 3216765 | 2484.1.1.297 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3, PF29688 | 0.89 | 83.0 | 7.06e-01 | 95.9% | 82.8% |
| 3274129 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 83.0 | 6.76e-01 | 97.6% | 88.1% |
| 3177640 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.59e-01 | 97.6% | 83.1% |
| 3928301 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 82.0 | 7.15e-01 | 95.1% | 86.5% |
| 3924554 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.64e-01 | 97.6% | 84.1% |
| 3933230 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 70.0 | 6.89e-01 | 81.3% | 76.9% |
| 3460608 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.63e-01 | 97.6% | 84.1% |
| 3249604 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.63e-01 | 97.6% | 84.1% |
| 4395654 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 81.0 | 6.77e-01 | 95.1% | 79.0% |
| 3737623 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 83.0 | 6.62e-01 | 97.6% | 82.7% |
| 3927688 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 81.0 | 7.18e-01 | 95.1% | 93.9% |
| 3462514 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.89 | 81.0 | 6.96e-01 | 95.1% | 89.4% |
| 3588051 | 2484.1.1.202 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_2 | 0.89 | 84.0 | 7.20e-01 | 98.4% | 89.4% |
| 3962721 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 68.0 | 6.98e-01 | 78.9% | 82.2% |
| 3939670 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 82.0 | 7.08e-01 | 95.9% | 84.0% |
| 3903903 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 80.0 | 6.77e-01 | 95.1% | 81.6% |
| 3926191 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 82.0 | 6.55e-01 | 97.6% | 84.5% |
| 3928988 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 82.0 | 6.49e-01 | 97.6% | 83.1% |
| 3783161 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 81.0 | 6.55e-01 | 96.7% | 89.3% |
| 3935131 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 81.0 | 7.19e-01 | 95.9% | 89.7% |
| 3939156 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 83.0 | 6.86e-01 | 97.6% | 88.2% |
| 3252840 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 82.0 | 6.31e-01 | 97.6% | 87.3% |
| 3930363 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.88 | 82.0 | 6.54e-01 | 97.6% | 82.7% |
| 3927185 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 83.0 | 6.78e-01 | 100.0% | 76.2% |
| 3927798 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.88 | 82.0 | 6.53e-01 | 97.6% | 83.6% |
| 3170687 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.87 | 81.0 | 6.95e-01 | 96.7% | 90.6% |
| 3936325 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.87 | 82.0 | 6.51e-01 | 98.4% | 84.0% |
| 3937782 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.87 | 83.0 | 7.36e-01 | 99.2% | 86.7% |
| 3939740 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 68.0 | 7.09e-01 | 81.3% | 88.7% |
| 4517192 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 81.0 | 6.83e-01 | 97.6% | 81.6% |
| 3934189 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.87 | 81.0 | 6.53e-01 | 97.6% | 84.2% |
| 3934129 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 81.0 | 6.61e-01 | 97.6% | 86.3% |
| 4150748 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 79.0 | 7.09e-01 | 95.1% | 91.9% |
| 3505730 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 77.0 | 6.56e-01 | 95.1% | 89.5% |
| 3933413 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.86 | 78.0 | 6.80e-01 | 95.9% | 89.1% |
| 3956973 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.86 | 81.0 | 6.38e-01 | 99.2% | 79.1% |
| 2771818 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.86 | 80.0 | 7.04e-01 | 97.6% | 87.1% |
| 3504836 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.86 | 79.0 | 6.52e-01 | 95.9% | 79.5% |
| 4339297 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 80.0 | 6.66e-01 | 97.6% | 85.1% |
| 3932223 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.86 | 79.0 | 6.32e-01 | 96.7% | 85.0% |
| 3939083 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 79.0 | 6.90e-01 | 95.9% | 84.7% |
| 3935879 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 78.0 | 6.57e-01 | 96.7% | 89.2% |
| 3925663 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.85 | 79.0 | 6.87e-01 | 96.7% | 84.0% |
| 3925232 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.85 | 80.0 | 6.69e-01 | 97.6% | 87.4% |
| 3930504 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 78.0 | 6.91e-01 | 95.9% | 88.5% |
| 3924869 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 78.0 | 6.88e-01 | 96.7% | 86.5% |
| 3514575 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 60.0 | 6.51e-01 | 73.2% | 89.5% |
| 3787139 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 77.0 | 6.72e-01 | 95.9% | 89.7% |
| 3626463 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 78.0 | 5.96e-01 | 97.6% | 85.5% |
| 3937850 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 78.0 | 6.84e-01 | 96.7% | 86.5% |
| 3924148 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.83 | 79.0 | 7.07e-01 | 100.0% | 89.7% |
| 5060129 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.83 | 80.0 | 6.85e-01 | 100.0% | 90.6% |
| 4961901 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.83 | 69.0 | 5.87e-01 | 87.0% | 83.5% |
| 3937267 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.83 | 76.0 | 6.33e-01 | 95.9% | 78.5% |
| 3504726 | 2484.1.1.268 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF5641 | 0.82 | 75.0 | 5.78e-01 | 97.6% | 82.4% |
| 5017867 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.81 | 68.0 | 6.00e-01 | 87.0% | 95.9% |
| 3926267 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 69.0 | 6.23e-01 | 88.6% | 88.7% |
| 5018575 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 59.0 | 6.17e-01 | 75.6% | 80.9% |
| 3905030 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 74.0 | 6.24e-01 | 97.6% | 85.1% |
| 4319980 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.80 | 69.0 | 5.76e-01 | 89.4% | 84.1% |
| 3940128 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 73.0 | 6.11e-01 | 95.9% | 77.4% |
| 3239102 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 72.0 | 6.47e-01 | 95.9% | 91.5% |
| 3565215 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 71.0 | 6.23e-01 | 95.1% | 88.0% |
| 3589031 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.79 | 67.0 | 5.86e-01 | 88.6% | 79.4% |
| 3564521 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.78 | 71.0 | 5.82e-01 | 95.9% | 72.9% |
| 3856885 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 71.0 | 5.87e-01 | 95.9% | 74.6% |
| 3253769 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 72.0 | 6.01e-01 | 96.7% | 81.5% |
| 428031 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.78 | 68.0 | 6.55e-01 | 91.1% | 100.0% |
| 3800321 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.77 | 68.0 | 5.73e-01 | 95.1% | 74.5% |
| 3518995 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 65.0 | 5.69e-01 | 94.3% | 92.6% |
| 5008723 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.71 | 65.0 | 5.74e-01 | 97.6% | 97.7% |
| 3928405 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 53.0 | 5.78e-01 | 91.1% | 99.0% |
D6
medium
residues 472-569
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09299.18 best | Mu-transpos_C | 44.9 | 1.30e-11 | 59.2% | 86.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 34.0 | 4.14e-01 | 74.5% | 91.7% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 28.0 | 3.32e-01 | 85.7% | 67.7% |
| 1iugA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 38.0 | 3.72e-01 | 70.4% | 83.8% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.56 | 40.0 | 3.37e-01 | 73.5% | 67.9% |
| 2k0mA00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 37.0 | 3.68e-01 | 75.5% | 63.5% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 34.0 | 3.81e-01 | 78.6% | 80.8% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 32.0 | 3.65e-01 | 83.7% | 76.0% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 41.0 | 3.64e-01 | 84.7% | 97.2% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 40.0 | 2.85e-01 | 83.7% | 67.3% |
| 1szsA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 37.0 | 3.15e-01 | 76.5% | 55.8% |
| 1stzA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 41.0 | 3.57e-01 | 95.9% | 57.7% |
| 3k25A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 41.0 | 3.09e-01 | 93.9% | 88.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4632713 | 2.8.1.0 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C | 0.73 | 50.0 | 4.82e-01 | 70.4% | 73.6% |
| 4032160 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.67 | 34.0 | 4.05e-01 | 71.4% | 72.3% |
| 4461457 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 32.0 | 3.81e-01 | 73.5% | 76.6% |
| 3390600 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.59 | 32.0 | 3.57e-01 | 70.4% | 68.0% |
| 3482225 | 4.1.1.300 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C | 0.58 | 33.0 | 3.02e-01 | 74.5% | 40.8% |
| 3880325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.58 | 34.0 | 3.95e-01 | 77.6% | 81.4% |
| 3529708 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 34.0 | 3.81e-01 | 77.6% | 76.0% |
| 3257362 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 41.0 | 3.96e-01 | 80.6% | 68.2% |
| 3511590 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 38.0 | 3.75e-01 | 81.6% | 67.6% |
| 3490698 | 5.1.4.337 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_CDC20-Fz | 0.52 | 38.0 | 2.54e-01 | 80.6% | 19.5% |
| 3213945 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.52 | 39.0 | 2.71e-01 | 81.6% | 74.8% |
| 142587 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.52 | 39.0 | 3.49e-01 | 79.6% | 100.0% |
| 4940663 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 38.0 | 3.73e-01 | 76.5% | 98.1% |
| 3385399 | 5.1.4.259 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_CDC20-Fz | 0.51 | 40.0 | 2.69e-01 | 85.7% | 38.8% |
| 3378955 | 5.1.4.259 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_CDC20-Fz | 0.51 | 37.0 | 2.52e-01 | 78.6% | 31.6% |
| 3213114 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.50 | 33.0 | 3.42e-01 | 77.6% | 71.1% |