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NC_020866.1__YP_007676394.1__RHVG_00015__00015
Bact-VirNC_020866.1__YP_007676394.1__RHVG_00015__00015
Identity
- Accession:
- NC_020866 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-53
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 59.0 | 4.10e-01 | 91.7% | 26.2% |
| 5umbA02 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.78 | 67.0 | 5.74e-01 | 95.8% | 62.7% |
| 5h7kA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 57.0 | 3.58e-01 | 79.2% | 27.7% |
| 2xssA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.75 | 66.0 | 4.54e-01 | 97.9% | 31.4% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 55.0 | 4.38e-01 | 81.2% | 92.6% |
| 6kbyA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.69 | 54.0 | 3.26e-01 | 100.0% | 12.2% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.69 | 55.0 | 4.26e-01 | 89.6% | 56.0% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 55.0 | 4.22e-01 | 91.7% | 81.1% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.65 | 58.0 | 4.80e-01 | 100.0% | 57.1% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.65 | 46.0 | 3.13e-01 | 75.0% | 100.0% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.65 | 54.0 | 4.28e-01 | 100.0% | 46.3% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.65 | 48.0 | 3.42e-01 | 89.6% | 24.6% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.64 | 50.0 | 3.16e-01 | 100.0% | 15.1% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.63 | 46.0 | 3.71e-01 | 83.3% | 38.8% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.63 | 51.0 | 3.06e-01 | 93.8% | 95.5% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.62 | 52.0 | 4.16e-01 | 93.8% | 82.7% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 48.0 | 3.15e-01 | 85.4% | 84.6% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 49.0 | 2.95e-01 | 95.8% | 11.6% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.61 | 52.0 | 3.86e-01 | 97.9% | 67.2% |
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 50.0 | 4.02e-01 | 91.7% | 86.0% |
| 3w3aG00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 48.0 | 3.21e-01 | 91.7% | 54.3% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 53.0 | 3.78e-01 | 100.0% | 37.2% |
| 2jheA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 47.0 | 3.65e-01 | 100.0% | 38.9% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 45.0 | 3.10e-01 | 85.4% | 33.2% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 3.38e-01 | 89.6% | 28.6% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 52.0 | 3.08e-01 | 97.9% | 28.5% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 2.82e-01 | 93.8% | 15.7% |
| 4indA01 | 2.60.120.1320 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 41.0 | 3.02e-01 | 100.0% | 24.7% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 45.0 | 3.47e-01 | 89.6% | 62.0% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 42.0 | 2.79e-01 | 81.2% | 19.3% |
| 1u0kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 50.0 | 3.71e-01 | 100.0% | 59.1% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 49.0 | 3.03e-01 | 97.9% | 16.2% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.58 | 49.0 | 3.14e-01 | 100.0% | 23.3% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 51.0 | 3.87e-01 | 100.0% | 55.0% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 46.0 | 3.19e-01 | 97.9% | 49.5% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.55e-01 | 77.1% | 70.4% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 46.0 | 2.93e-01 | 100.0% | 67.9% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 42.0 | 3.62e-01 | 95.8% | 62.0% |
| 3vwoA02 | 2.10.70.40 | Mainly Beta › Ribbon › Complement Module; domain 1 › peptidoglycan hydrolase | 0.54 | 35.0 | 3.46e-01 | 70.8% | 58.8% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.54 | 45.0 | 3.16e-01 | 91.7% | 56.8% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 41.0 | 3.38e-01 | 91.7% | 44.9% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 41.0 | 3.61e-01 | 100.0% | 80.9% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 44.0 | 2.99e-01 | 93.8% | 25.8% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 40.0 | 2.55e-01 | 89.6% | 14.8% |
| 2x10A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 3.16e-01 | 100.0% | 90.1% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.53 | 42.0 | 3.38e-01 | 97.9% | 60.7% |
| 1a97B00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 3.01e-01 | 97.9% | 30.4% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 3.03e-01 | 83.3% | 78.2% |
| 6y43A01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.51 | 38.0 | 2.91e-01 | 91.7% | 51.7% |
| 2z86D02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 39.0 | 2.59e-01 | 93.8% | 18.1% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.10e-01 | 85.4% | 72.8% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.08e-01 | 85.4% | 90.4% |
| 2gpyB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 43.0 | 2.94e-01 | 100.0% | 38.0% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.50 | 43.0 | 2.52e-01 | 100.0% | 20.5% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.50 | 42.0 | 3.40e-01 | 100.0% | 63.4% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3512028 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.81 | 59.0 | 3.66e-01 | 79.2% | 20.0% |
| 3482243 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.80 | 64.0 | 6.17e-01 | 100.0% | 76.4% |
| 3479024 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.80 | 63.0 | 6.10e-01 | 100.0% | 76.4% |
| 4442629 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.75 | 52.0 | 3.24e-01 | 72.9% | 38.6% |
| 3890772 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.74 | 63.0 | 5.52e-01 | 97.9% | 64.0% |
| 3466238 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.74 | 59.0 | 3.40e-01 | 87.5% | 36.2% |
| 3443252 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.74 | 59.0 | 6.09e-01 | 93.8% | 100.0% |
| 4304389 | 5086.1.1.119 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › RRG1_C | 0.73 | 56.0 | 3.63e-01 | 83.3% | 36.8% |
| 4056919 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.73 | 54.0 | 3.42e-01 | 79.2% | 84.9% |
| 3406884 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 58.0 | 3.68e-01 | 100.0% | 33.6% |
| 3806349 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.68 | 60.0 | 3.38e-01 | 100.0% | 9.7% |
| 4880634 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.67 | 50.0 | 4.77e-01 | 93.8% | 69.5% |
| 3542800 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.67 | 59.0 | 3.70e-01 | 100.0% | 37.3% |
| 3805784 | 109.4.1.3484 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, E_motif | 0.66 | 47.0 | 3.18e-01 | 85.4% | 21.2% |
| 3828334 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.66 | 47.0 | 2.85e-01 | 87.5% | 12.1% |
| 3993677 | 823.1.1.0 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW | 0.66 | 52.0 | 4.72e-01 | 100.0% | 62.9% |
| 3324101 | 207.1.1.47 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 | 0.64 | 48.0 | 2.85e-01 | 93.8% | 9.9% |
| 185814 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.62 | 54.0 | 4.52e-01 | 100.0% | 98.8% |
| 3803650 | 109.4.1.1335 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif | 0.62 | 55.0 | 3.05e-01 | 100.0% | 10.7% |
| 3508353 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.62 | 52.0 | 3.31e-01 | 95.8% | 31.2% |
| 3666479 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.61 | 48.0 | 3.35e-01 | 93.8% | 26.5% |
| 2440220 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.61 | 48.0 | 4.59e-01 | 97.9% | 74.6% |
| 5024728 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.61 | 48.0 | 3.20e-01 | 100.0% | 29.5% |
| 3168821 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 48.0 | 2.92e-01 | 87.5% | 49.2% |
| 1278602 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.61 | 48.0 | 4.57e-01 | 95.8% | 75.0% |
| 3377656 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.60 | 46.0 | 2.65e-01 | 93.8% | 7.6% |
| 3641285 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.60 | 51.0 | 2.87e-01 | 95.8% | 8.7% |
| 3823363 | 109.4.1.1371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif | 0.60 | 49.0 | 2.85e-01 | 89.6% | 11.9% |
| 3468311 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.59 | 49.0 | 2.94e-01 | 93.8% | 12.9% |
| 5055279 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.59 | 48.0 | 3.33e-01 | 100.0% | 73.7% |
| 3382036 | 109.4.1.2177 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif, TPR_24 | 0.59 | 46.0 | 2.87e-01 | 87.5% | 16.3% |
| 3957084 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.58 | 41.0 | 3.62e-01 | 81.2% | 47.5% |
| 3818641 | 109.4.1.2070 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, E_motif | 0.58 | 44.0 | 2.67e-01 | 85.4% | 12.6% |
| 141070 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.58 | 45.0 | 4.40e-01 | 97.9% | 89.5% |
| 3325708 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.58 | 44.0 | 2.72e-01 | 85.4% | 15.4% |
| 3366822 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.58 | 44.0 | 2.73e-01 | 85.4% | 15.3% |
| 3369483 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.58 | 50.0 | 3.17e-01 | 97.9% | 19.6% |
| 3377363 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.57 | 45.0 | 2.49e-01 | 87.5% | 6.3% |
| 3465965 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.57 | 45.0 | 2.61e-01 | 87.5% | 10.4% |
| 4505972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 50.0 | 3.05e-01 | 100.0% | 18.8% |
| 3940062 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.57 | 49.0 | 3.04e-01 | 100.0% | 49.5% |
| 4638770 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.57 | 52.0 | 4.13e-01 | 100.0% | 53.3% |
| 3457807 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.56 | 43.0 | 2.70e-01 | 85.4% | 15.5% |
| 4989739 | 604.2.1.1 ↗ | alpha bundles › Spectrin repeat-like › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain › Succ_DH_flav_C | 0.56 | 48.0 | 3.50e-01 | 97.9% | 74.3% |
| 3362870 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.56 | 43.0 | 2.73e-01 | 85.4% | 18.1% |
| 3299745 | 207.1.1.185 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 | 0.56 | 43.0 | 2.55e-01 | 85.4% | 17.5% |
| 3442448 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.56 | 44.0 | 2.46e-01 | 87.5% | 7.7% |
| 3922189 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.56 | 51.0 | 4.46e-01 | 100.0% | 68.6% |
| 3318043 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.56 | 42.0 | 2.37e-01 | 83.3% | 11.9% |
| 3641031 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.56 | 43.0 | 2.64e-01 | 87.5% | 14.2% |
| 3442732 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.55 | 46.0 | 3.34e-01 | 91.7% | 36.2% |
| 5002173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 47.0 | 3.81e-01 | 93.8% | 64.4% |
| 5021275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 46.0 | 3.56e-01 | 93.8% | 54.5% |
| 3346465 | 109.4.1.1371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif | 0.55 | 46.0 | 2.63e-01 | 93.8% | 9.1% |
| 3348687 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.55 | 49.0 | 3.57e-01 | 100.0% | 40.0% |
| 3915100 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.55 | 43.0 | 3.09e-01 | 91.7% | 59.4% |
| 3381391 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.55 | 44.0 | 2.61e-01 | 97.9% | 12.6% |
| 3327782 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.55 | 44.0 | 2.44e-01 | 91.7% | 5.7% |
| 3722655 | 312.1.1.11 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N | 0.54 | 40.0 | 2.88e-01 | 85.4% | 58.1% |
| 3419693 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.53 | 42.0 | 2.82e-01 | 87.5% | 23.6% |
| 3295463 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.53 | 44.0 | 2.50e-01 | 97.9% | 17.6% |
| 3364208 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.53 | 43.0 | 2.58e-01 | 91.7% | 13.3% |
| 5042930 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.52 | 47.0 | 2.92e-01 | 100.0% | 41.5% |
| 3817779 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.52 | 46.0 | 2.77e-01 | 100.0% | 35.2% |
| 3987356 | 3067.1.1.1 ↗ | few secondary structure elements › N-terminal domain of helicase-loading protein DnaI › N-terminal domain of helicase-loading protein DnaI › N-terminal domain of helicase-loading protein DnaI › DnaI_N | 0.51 | 46.0 | 3.78e-01 | 100.0% | 56.5% |
| 3831231 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.51 | 44.0 | 2.49e-01 | 100.0% | 18.6% |
| 5011884 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.51 | 46.0 | 2.86e-01 | 100.0% | 40.8% |
| 3459843 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.50 | 43.0 | 2.51e-01 | 100.0% | 21.6% |
| 3809404 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.50 | 41.0 | 2.31e-01 | 91.7% | 7.5% |