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NC_020866.1__YP_007676419.1__RHVG_00040__00040
Bact-VirNC_020866.1__YP_007676419.1__RHVG_00040__00040
Identity
- Accession:
- NC_020866 ↗
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-139
Domain cluster:
rep: OL597546.1__UUB23297.1__X__00001__D24-147
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10123.15 best | Mu-like_Pro | 57.1 | 3.20e-15 | 85.7% | 37.1% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yelA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.69 | 48.0 | 5.31e-01 | 100.0% | 91.2% |
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.67 | 57.0 | 4.72e-01 | 89.5% | 61.3% |
| 1at3A00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.67 | 57.0 | 4.76e-01 | 89.5% | 54.8% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.66 | 37.0 | 4.69e-01 | 97.0% | 97.3% |
| 4i1kA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.63 | 44.0 | 4.66e-01 | 99.2% | 80.5% |
| 1cmvB00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.62 | 52.0 | 4.46e-01 | 89.5% | 57.3% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 37.0 | 4.16e-01 | 96.2% | 78.6% |
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.59 | 28.0 | 3.89e-01 | 72.2% | 93.7% |
| 1dn0D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 38.0 | 4.38e-01 | 97.0% | 93.6% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 36.0 | 3.92e-01 | 80.5% | 73.9% |
| 4gnxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 30.0 | 3.29e-01 | 100.0% | 61.1% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 41.0 | 4.53e-01 | 99.2% | 97.2% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 29.0 | 3.74e-01 | 99.2% | 90.5% |
| 2y4iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 30.0 | 3.51e-01 | 70.7% | 75.8% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 26.0 | 3.45e-01 | 74.4% | 86.4% |
| 3vvvA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 4.15e-01 | 98.5% | 89.8% |
| 2cxiA01 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.53 | 29.0 | 3.65e-01 | 88.7% | 88.6% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 33.0 | 3.29e-01 | 100.0% | 59.1% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.52 | 35.0 | 4.02e-01 | 80.5% | 95.7% |
| 3hn5A02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 4.21e-01 | 100.0% | 98.3% |
| 3q2wA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 36.0 | 3.92e-01 | 98.5% | 93.3% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.50 | 37.0 | 4.07e-01 | 76.7% | 96.2% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3165956 | 2007.2.4.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase › Mu-like_Pro | 0.89 | 74.0 | 7.29e-01 | 86.5% | 92.9% |
| 4960055 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.76 | 63.0 | 6.21e-01 | 87.2% | 89.9% |
| 3166306 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.76 | 64.0 | 6.11e-01 | 89.5% | 90.2% |
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.75 | 68.0 | 6.62e-01 | 97.0% | 99.3% |
| 5003309 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.75 | 63.0 | 6.39e-01 | 88.7% | 92.3% |
| 4995675 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.75 | 69.0 | 6.40e-01 | 100.0% | 97.6% |
| 5004197 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.73 | 53.0 | 6.03e-01 | 76.7% | 100.0% |
| 3959024 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.73 | 41.0 | 4.54e-01 | 88.7% | 69.5% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.71 | 59.0 | 5.84e-01 | 88.7% | 92.1% |
| 3964748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 53.0 | 5.85e-01 | 91.0% | 100.0% |
| 3327380 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.70 | 48.0 | 5.34e-01 | 99.2% | 89.5% |
| 3602442 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.70 | 54.0 | 5.88e-01 | 88.7% | 98.2% |
| 5041953 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 33.0 | 4.68e-01 | 85.7% | 100.0% |
| 3811965 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.69 | 50.0 | 5.57e-01 | 99.2% | 97.1% |
| 3837212 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.68 | 46.0 | 5.26e-01 | 99.2% | 95.8% |
| 3673929 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.68 | 45.0 | 5.20e-01 | 98.5% | 94.7% |
| 3318672 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.67 | 46.0 | 4.99e-01 | 99.2% | 84.4% |
| 3353150 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.67 | 45.0 | 5.21e-01 | 100.0% | 96.8% |
| 3824022 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.67 | 48.0 | 5.35e-01 | 99.2% | 98.0% |
| 3418697 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.67 | 47.0 | 5.31e-01 | 98.5% | 98.0% |
| 3428887 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 44.0 | 5.09e-01 | 98.5% | 95.7% |
| 3417387 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 46.0 | 5.05e-01 | 100.0% | 89.5% |
| 4926792 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.66 | 35.0 | 4.60e-01 | 82.0% | 95.7% |
| 3811574 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 44.0 | 4.99e-01 | 99.2% | 91.0% |
| 3646946 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 46.0 | 5.17e-01 | 98.5% | 96.0% |
| 3824023 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 46.0 | 5.21e-01 | 99.2% | 98.0% |
| 3830192 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.66 | 46.0 | 5.13e-01 | 99.2% | 95.0% |
| 3602200 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 36.0 | 4.66e-01 | 94.7% | 100.0% |
| 3678124 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.65 | 46.0 | 5.11e-01 | 98.5% | 94.2% |
| 4259810 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.65 | 38.0 | 4.68e-01 | 97.0% | 95.0% |
| 4331397 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.65 | 38.0 | 4.68e-01 | 87.2% | 93.8% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.65 | 39.0 | 4.85e-01 | 94.7% | 98.8% |
| 3374213 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.65 | 45.0 | 5.13e-01 | 100.0% | 98.9% |
| 5041607 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 38.0 | 4.69e-01 | 97.0% | 100.0% |
| 3827097 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.64 | 45.0 | 4.89e-01 | 99.2% | 87.3% |
| 3318678 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.64 | 45.0 | 4.85e-01 | 99.2% | 84.3% |
| 5002426 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 41.0 | 4.84e-01 | 97.0% | 98.8% |
| 3662991 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.64 | 45.0 | 5.01e-01 | 100.0% | 95.0% |
| 3649449 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.64 | 48.0 | 5.00e-01 | 100.0% | 84.8% |
| 5051893 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 39.0 | 4.76e-01 | 96.2% | 100.0% |
| 3382288 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 45.0 | 4.81e-01 | 99.2% | 85.2% |
| 3460772 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 46.0 | 4.76e-01 | 100.0% | 80.8% |
| 3345450 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 46.0 | 4.80e-01 | 99.2% | 84.2% |
| 3674876 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.62 | 46.0 | 4.54e-01 | 100.0% | 73.2% |
| 3337794 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.62 | 52.0 | 5.19e-01 | 98.5% | 88.1% |
| 3647873 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.62 | 45.0 | 4.99e-01 | 98.5% | 96.2% |
| 4655870 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.62 | 45.0 | 4.64e-01 | 97.0% | 77.7% |
| 3813512 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.62 | 44.0 | 4.80e-01 | 98.5% | 90.0% |
| 3304067 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 43.0 | 4.82e-01 | 98.5% | 97.0% |
| 3982061 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.61 | 41.0 | 4.28e-01 | 89.5% | 73.6% |
| 3443486 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 45.0 | 4.55e-01 | 100.0% | 78.5% |
| 3417865 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.61 | 46.0 | 5.00e-01 | 100.0% | 97.3% |
| 3943528 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.61 | 41.0 | 4.35e-01 | 88.7% | 76.7% |
| 3447738 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.60 | 44.0 | 4.87e-01 | 100.0% | 98.1% |
| 4014420 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 41.0 | 4.67e-01 | 96.2% | 96.8% |
| 3325228 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.60 | 42.0 | 4.70e-01 | 99.2% | 97.9% |
| 3661923 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.60 | 43.0 | 4.54e-01 | 99.2% | 83.3% |
| 5018524 | 304.55.2.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp | 0.58 | 37.0 | 4.07e-01 | 82.0% | 78.2% |
| 3901913 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.57 | 39.0 | 4.13e-01 | 100.0% | 78.3% |
| 3461468 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.57 | 44.0 | 4.65e-01 | 98.5% | 94.8% |
| 3328146 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.57 | 48.0 | 4.78e-01 | 100.0% | 90.4% |
| 3862524 | 712.1.1.1 ↗ | beta sandwiches › ENV polyprotein, receptor-binding domain › ENV polyprotein, receptor-binding domain › ENV polyprotein, receptor-binding domain › TLV_coat | 0.56 | 48.0 | 4.16e-01 | 97.0% | 94.5% |
| 4508428 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.54 | 38.0 | 4.30e-01 | 94.7% | 100.0% |
| 4956522 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 31.0 | 3.31e-01 | 100.0% | 62.6% |
| 5024522 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 48.0 | 4.45e-01 | 97.0% | 81.2% |
| 4040332 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.54 | 30.0 | 3.69e-01 | 89.5% | 88.7% |
| 4983501 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 26.0 | 3.20e-01 | 74.4% | 75.0% |
| 3619679 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.99e-01 | 97.0% | 93.0% |
| 4388283 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.51 | 27.0 | 3.36e-01 | 74.4% | 91.4% |
| 3273446 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 4.01e-01 | 97.0% | 93.6% |
D2
high
residues 230-306
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.76 | 52.0 | 4.25e-01 | 70.1% | 41.4% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.65 | 48.0 | 4.12e-01 | 76.6% | 61.7% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 47.0 | 3.88e-01 | 77.9% | 97.8% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.63 | 43.0 | 4.37e-01 | 70.1% | 73.7% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 43.0 | 3.91e-01 | 71.4% | 57.8% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.61 | 42.0 | 3.53e-01 | 72.7% | 66.2% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.59 | 52.0 | 4.47e-01 | 94.8% | 98.3% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 48.0 | 4.05e-01 | 96.1% | 97.9% |
| 5dqqA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 49.0 | 4.17e-01 | 100.0% | 68.2% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 46.0 | 3.71e-01 | 93.5% | 100.0% |
| 1hciA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 49.0 | 4.10e-01 | 100.0% | 93.7% |
| 3pfiA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 28.0 | 2.89e-01 | 74.0% | 49.3% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 32.0 | 3.17e-01 | 83.1% | 56.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927302 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.81 | 55.0 | 4.41e-01 | 70.1% | 48.6% |
| 3618461 | 632.22.1.29 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › 7tm_1 | 0.73 | 56.0 | 5.05e-01 | 81.8% | 100.0% |
| 4505585 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.72 | 36.0 | 3.26e-01 | 96.1% | 36.0% |
| 3594525 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.72 | 47.0 | 4.28e-01 | 70.1% | 51.0% |
| 3937021 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.72 | 56.0 | 3.67e-01 | 83.1% | 43.5% |
| 3691326 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 48.0 | 4.94e-01 | 71.4% | 80.0% |
| 4977537 | 1174.1.1.0 ↗ | alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 | 0.67 | 59.0 | 4.25e-01 | 96.1% | 50.0% |
| 4652719 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.66 | 42.0 | 3.98e-01 | 100.0% | 52.6% |
| 3863657 | 192.29.1.26 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › BAG6 | 0.66 | 42.0 | 3.58e-01 | 88.3% | 43.5% |
| 4602463 | 3943.1.1.2 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › FliD_C | 0.62 | 55.0 | 3.78e-01 | 94.8% | 58.3% |
| 4021306 | 133.1.1.0 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) | 0.60 | 51.0 | 3.75e-01 | 96.1% | 57.1% |
| 4056127 | 601.50.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain › FliD_C | 0.59 | 51.0 | 3.81e-01 | 93.5% | 74.6% |
| 168725 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.59 | 43.0 | 3.58e-01 | 79.2% | 93.0% |
| 4986629 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.52 | 44.0 | 3.02e-01 | 92.2% | 29.8% |
| 3849992 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.52 | 47.0 | 4.33e-01 | 100.0% | 100.0% |