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NC_020868.1__YP_007676565.1__VPMG_00075__00075
Bact-VirNC_020868.1__YP_007676565.1__VPMG_00075__00075
Identity
- Accession:
- NC_020868 ↗
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Taxonomy
TaxID: 754072
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 65-129
Domain cluster:
rep: NC_054970.1__YP_010079266.1__KMC58_gp54__00054__D39-93
D2
medium
residues 5-64
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00431__D13-65
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7z0sF01 | 3.30.70.3270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.32e-01 | 81.7% | 65.8% |
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.54 | 42.0 | 2.95e-01 | 85.0% | 90.6% |
| 4zdnA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.53 | 36.0 | 3.11e-01 | 71.7% | 64.9% |
| 1jy2O00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 35.0 | 3.77e-01 | 80.0% | 84.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4057639 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.60 | 38.0 | 2.88e-01 | 96.7% | 26.2% |
| 4977369 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.52 | 40.0 | 2.74e-01 | 98.3% | 20.8% |