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NC_020872.1__YP_007676889.1__CYYG_00044__00043
Bact-VirNC_020872.1__YP_007676889.1__CYYG_00044__00043
Identity
- Accession:
- NC_020872 ↗
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Taxonomy
TaxID: 616674
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-188
Domain cluster:
rep: IMGVR_UViG_3300028089_000252-3300028089-Ga0255299_10029802__D277-388_452-478
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 54.3 | 1.30e-14 | 85.8% | 18.7% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.91 | 88.0 | 5.59e-01 | 100.0% | 33.9% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.89 | 81.0 | 5.50e-01 | 100.0% | 31.6% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.88 | 85.0 | 5.49e-01 | 100.0% | 29.8% |
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.87 | 84.0 | 5.68e-01 | 100.0% | 43.6% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 74.0 | 4.99e-01 | 100.0% | 35.2% |
| 3rdkB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 58.0 | 4.53e-01 | 93.2% | 71.0% |
| 1fobA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 61.0 | 4.77e-01 | 100.0% | 76.3% |
| 4f8xA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 57.0 | 4.49e-01 | 93.2% | 65.1% |
| 1d8cA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.65 | 60.0 | 4.35e-01 | 100.0% | 59.0% |
| 2qhaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 60.0 | 4.66e-01 | 100.0% | 70.2% |
| 1gw1A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 60.0 | 4.51e-01 | 100.0% | 67.7% |
| 3cuxA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.64 | 59.0 | 4.47e-01 | 100.0% | 62.4% |
| 3emzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 58.0 | 4.60e-01 | 100.0% | 76.1% |
| 5ay7B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 55.0 | 4.36e-01 | 93.2% | 69.3% |
| 1tq8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 35.0 | 3.95e-01 | 100.0% | 67.7% |
| 3pztB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 59.0 | 4.77e-01 | 100.0% | 68.2% |
| 8g3hA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.63 | 57.0 | 4.67e-01 | 100.0% | 90.1% |
| 3hpxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 56.0 | 4.62e-01 | 98.1% | 67.4% |
| 2dskA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 58.0 | 4.69e-01 | 100.0% | 82.3% |
| 1jphA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.62 | 57.0 | 4.41e-01 | 100.0% | 86.3% |
| 4d8tA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 38.0 | 4.56e-01 | 72.8% | 90.8% |
| 7d88A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 58.0 | 4.43e-01 | 100.0% | 62.6% |
| 3ua3B01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 57.0 | 4.74e-01 | 100.0% | 78.1% |
| 1aq0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 57.0 | 4.60e-01 | 100.0% | 81.0% |
| 2i2xB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.61 | 43.0 | 4.64e-01 | 98.8% | 85.4% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 55.0 | 4.44e-01 | 100.0% | 79.3% |
| 2yijB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 52.0 | 3.96e-01 | 93.2% | 87.8% |
| 3jteA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 43.0 | 4.83e-01 | 98.8% | 94.4% |
| 6uczB00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.60 | 55.0 | 4.66e-01 | 100.0% | 92.5% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 54.0 | 4.65e-01 | 100.0% | 78.2% |
| 3cg4A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 43.0 | 4.76e-01 | 98.1% | 95.2% |
| 2pcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 55.0 | 4.51e-01 | 100.0% | 68.8% |
| 4ovxA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.59 | 54.0 | 4.56e-01 | 100.0% | 88.5% |
| 1ur3M00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.59 | 54.0 | 4.40e-01 | 100.0% | 86.2% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.59 | 54.0 | 4.51e-01 | 100.0% | 68.7% |
| 4eqsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 40.0 | 4.27e-01 | 95.7% | 78.3% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 52.0 | 4.90e-01 | 98.8% | 86.6% |
| 4mwaA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.58 | 54.0 | 4.58e-01 | 100.0% | 80.8% |
| 5kinC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 53.0 | 4.58e-01 | 100.0% | 84.9% |
| 2hy5B00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.58 | 44.0 | 4.83e-01 | 100.0% | 97.0% |
| 6l25A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 53.0 | 4.51e-01 | 98.8% | 65.1% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 53.0 | 4.37e-01 | 100.0% | 73.7% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 53.0 | 4.70e-01 | 98.8% | 92.4% |
| 2oqhA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 53.0 | 4.58e-01 | 100.0% | 80.5% |
| 7tjbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 52.0 | 4.83e-01 | 98.8% | 94.7% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 37.0 | 4.15e-01 | 87.0% | 83.5% |
| 1jpdX02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 53.0 | 4.84e-01 | 100.0% | 87.4% |
| 2qs7A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.57 | 45.0 | 4.88e-01 | 100.0% | 97.1% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 40.0 | 4.44e-01 | 98.8% | 91.4% |
| 3pnxA00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.56 | 45.0 | 4.56e-01 | 83.3% | 98.1% |
| 1vhcF00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 52.0 | 4.73e-01 | 100.0% | 79.3% |
| 3ktdC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 4.44e-01 | 91.4% | 82.5% |
| 3pffA05 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.56 | 49.0 | 4.79e-01 | 93.8% | 92.0% |
| 3sxpA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 45.0 | 4.19e-01 | 87.0% | 100.0% |
| 2lleA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.51e-01 | 100.0% | 76.5% |
| 1spxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 50.0 | 4.41e-01 | 99.4% | 97.0% |
| 1agyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 48.0 | 4.54e-01 | 95.1% | 98.0% |
| 1vcfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 50.0 | 4.12e-01 | 100.0% | 62.1% |
| 3nwoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 47.0 | 3.88e-01 | 93.2% | 97.3% |
| 6uh2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 49.0 | 4.36e-01 | 98.1% | 92.4% |
| 4p0tB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 4.28e-01 | 98.8% | 84.7% |
| 1jeyB01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 49.0 | 4.40e-01 | 98.8% | 98.7% |
| 3wtbC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.30e-01 | 98.8% | 90.1% |
| 4nk4F00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.19e-01 | 98.8% | 89.5% |
| 4b79B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.33e-01 | 98.8% | 88.0% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 4.25e-01 | 100.0% | 95.1% |
| 1r8jB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 38.0 | 3.93e-01 | 98.8% | 77.2% |
| 5z2lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 47.0 | 4.21e-01 | 98.1% | 87.4% |
| 4j3fA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 48.0 | 4.14e-01 | 99.4% | 94.2% |
| 7mi0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 34.0 | 3.25e-01 | 94.4% | 54.8% |
| 3c5cB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 48.0 | 4.84e-01 | 98.8% | 97.0% |
| 2wjeA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 47.0 | 4.19e-01 | 100.0% | 81.6% |
| 3a2bA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 43.0 | 3.82e-01 | 88.9% | 60.9% |
| 3h8lA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 4.30e-01 | 94.4% | 92.1% |
| 2wc1A00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 45.0 | 4.40e-01 | 100.0% | 98.4% |
| 4amuA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.50 | 35.0 | 3.52e-01 | 100.0% | 68.5% |
| 6ohkA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.50 | 44.0 | 4.42e-01 | 98.8% | 95.9% |
| 7v58A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 44.0 | 3.86e-01 | 99.4% | 64.4% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4825675 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.98 | 72.0 | 5.96e-01 | 74.7% | 48.0% |
| 4990406 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.93 | 90.0 | 5.82e-01 | 100.0% | 39.5% |
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.92 | 89.0 | 5.60e-01 | 100.0% | 31.2% |
| 5058546 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.91 | 88.0 | 5.68e-01 | 100.0% | 35.5% |
| 4937370 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.70e-01 | 100.0% | 41.2% |
| 3972491 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.75e-01 | 100.0% | 39.3% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.76e-01 | 100.0% | 38.6% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.83e-01 | 100.0% | 41.3% |
| 3590466 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.80e-01 | 100.0% | 39.8% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 87.0 | 5.76e-01 | 100.0% | 34.8% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.71e-01 | 100.0% | 37.3% |
| 4963031 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.66e-01 | 100.0% | 43.6% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.89e-01 | 100.0% | 44.1% |
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.91 | 87.0 | 5.72e-01 | 100.0% | 37.9% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.91 | 88.0 | 5.86e-01 | 100.0% | 43.1% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 5.63e-01 | 100.0% | 34.8% |
| 4934525 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 5.78e-01 | 100.0% | 35.0% |
| 5063882 | 1074.1.1.6 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgC | 0.90 | 87.0 | 6.48e-01 | 100.0% | 52.1% |
| 4985374 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 5.71e-01 | 100.0% | 33.0% |
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 5.77e-01 | 100.0% | 41.0% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 5.79e-01 | 100.0% | 41.7% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 87.0 | 5.80e-01 | 100.0% | 42.1% |
| 3958480 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.89 | 85.0 | 6.26e-01 | 98.8% | 58.1% |
| 2504767 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.89 | 85.0 | 5.77e-01 | 100.0% | 42.1% |
| 5040104 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.89 | 86.0 | 5.76e-01 | 100.0% | 37.8% |
| 4993733 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.88 | 84.0 | 5.58e-01 | 99.4% | 82.4% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.87 | 83.0 | 5.64e-01 | 98.8% | 98.6% |
| 2472944 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 84.0 | 5.87e-01 | 100.0% | 37.8% |
| 3275621 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.76 | 73.0 | 5.12e-01 | 100.0% | 38.0% |
| 135966 | 2002.1.1.41 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase | 0.69 | 63.0 | 4.87e-01 | 100.0% | 79.1% |
| 4976702 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.66 | 56.0 | 4.63e-01 | 92.0% | 69.0% |
| 5017198 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.65 | 44.0 | 5.13e-01 | 100.0% | 97.4% |
| 3954215 | 2002.1.1.41 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase | 0.64 | 59.0 | 4.52e-01 | 100.0% | 78.1% |
| 5012686 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 58.0 | 4.42e-01 | 98.8% | 79.9% |
| 2570417 | 2002.1.1.89 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_26 | 0.63 | 58.0 | 4.43e-01 | 100.0% | 70.1% |
| 3234365 | 2002.1.1.189 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM | 0.63 | 58.0 | 4.69e-01 | 100.0% | 75.0% |
| 4989351 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.63 | 57.0 | 4.93e-01 | 100.0% | 69.0% |
| 4935439 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.63 | 57.0 | 4.36e-01 | 100.0% | 65.3% |
| 3567847 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 57.0 | 4.49e-01 | 99.4% | 82.7% |
| 2878231 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 56.0 | 4.66e-01 | 98.1% | 73.4% |
| 5022641 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.62 | 53.0 | 4.79e-01 | 100.0% | 66.8% |
| 4985918 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.62 | 44.0 | 5.03e-01 | 100.0% | 97.5% |
| 4995446 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 56.0 | 4.76e-01 | 100.0% | 65.6% |
| 3951560 | 2007.1.3.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › GlnR_1st | 0.62 | 41.0 | 4.60e-01 | 98.1% | 86.4% |
| 5077711 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.61 | 56.0 | 4.67e-01 | 100.0% | 90.0% |
| None | — | 0.61 | 53.0 | 3.84e-01 | 95.1% | 71.1% | |
| 5060470 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 53.0 | 4.16e-01 | 95.1% | 74.9% |
| 4523804 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.61 | 56.0 | 4.73e-01 | 100.0% | 80.8% |
| 3450020 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.61 | 48.0 | 3.61e-01 | 97.5% | 34.0% |
| None | — | 0.61 | 53.0 | 3.83e-01 | 95.1% | 71.1% | |
| 3302832 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.60 | 48.0 | 4.81e-01 | 97.5% | 80.0% |
| 4295126 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.60 | 53.0 | 4.33e-01 | 93.8% | 72.4% |
| 4943916 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 52.0 | 4.43e-01 | 93.2% | 70.9% |
| 3956660 | 2007.1.3.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › GlnR_1st | 0.60 | 42.0 | 4.69e-01 | 98.1% | 91.2% |
| None | — | 0.60 | 55.0 | 4.62e-01 | 100.0% | 79.3% | |
| 3981350 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.59 | 55.0 | 4.59e-01 | 100.0% | 75.8% |
| 3275807 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 53.0 | 4.21e-01 | 100.0% | 86.0% |
| 4972088 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.58 | 53.0 | 4.48e-01 | 100.0% | 83.7% |
| 3839726 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.55 | 47.0 | 3.72e-01 | 92.0% | 70.5% |
| 3002691 | 2007.5.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › DUF459 | 0.55 | 49.0 | 4.43e-01 | 98.8% | 87.8% |
| 5064904 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.54 | 42.0 | 4.46e-01 | 93.8% | 92.9% |
| 3219878 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.54 | 43.0 | 3.50e-01 | 84.6% | 89.7% |
| 5076479 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.54 | 46.0 | 4.29e-01 | 93.2% | 74.5% |
| 4248511 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.54 | 48.0 | 4.27e-01 | 98.8% | 97.9% |
| 3966385 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 46.0 | 4.22e-01 | 93.2% | 83.3% |
| 4012677 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.53 | 46.0 | 4.37e-01 | 98.8% | 95.1% |
| 5049407 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.52 | 47.0 | 4.40e-01 | 99.4% | 99.5% |
| 3274953 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 47.0 | 2.95e-01 | 98.1% | 97.1% |
| 4987822 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.52 | 44.0 | 4.28e-01 | 90.7% | 98.9% |
| 3272325 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.51 | 47.0 | 4.02e-01 | 99.4% | 94.8% |
| 5067896 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.51 | 45.0 | 4.32e-01 | 98.8% | 87.4% |
| 4260290 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.50 | 43.0 | 3.98e-01 | 92.6% | 92.8% |
| 4237400 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.50 | 43.0 | 4.31e-01 | 93.2% | 94.1% |
| 4196458 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.50 | 43.0 | 3.93e-01 | 93.2% | 82.8% |
D2
medium
residues 1-26_191-332_364-396
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 74.0 | 5.05e-01 | 100.0% | 93.8% |
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 74.0 | 5.00e-01 | 100.0% | 78.0% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 71.0 | 5.24e-01 | 97.5% | 93.1% |
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.76 | 71.0 | 5.09e-01 | 97.5% | 92.3% |
| 1k77A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.66 | 48.0 | 4.42e-01 | 96.0% | 58.3% |
| 3zm8A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 54.0 | 4.62e-01 | 96.0% | 56.2% |
| 2qhaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 57.0 | 4.71e-01 | 99.5% | 55.7% |
| 6d2xA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 55.0 | 4.64e-01 | 98.5% | 62.5% |
| 4ay7A00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.59 | 52.0 | 4.38e-01 | 95.5% | 62.9% |
| 2eplX02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 49.0 | 4.24e-01 | 98.5% | 58.3% |
| 1t7lB01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.57 | 51.0 | 4.13e-01 | 95.5% | 61.1% |
| 1jphA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.57 | 48.0 | 3.90e-01 | 87.1% | 57.4% |
| 2qw5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 51.0 | 4.28e-01 | 95.5% | 63.6% |
| 6omzA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.56 | 45.0 | 4.07e-01 | 96.0% | 62.0% |
| 3qxbA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 44.0 | 3.84e-01 | 96.5% | 55.2% |
| 3fj1A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.54 | 28.0 | 2.92e-01 | 98.0% | 49.7% |
| 4e3zB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 4.07e-01 | 98.5% | 72.4% |
| 1snyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 4.19e-01 | 98.5% | 72.6% |
| 4x54A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 4.13e-01 | 97.5% | 80.4% |
| 2vliB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 34.0 | 3.67e-01 | 96.5% | 79.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.75 | 65.0 | 4.41e-01 | 91.0% | 91.8% |
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.74 | 64.0 | 4.55e-01 | 89.6% | 89.1% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.71 | 65.0 | 4.60e-01 | 94.5% | 92.0% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.71 | 65.0 | 4.63e-01 | 94.5% | 93.8% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.71 | 65.0 | 4.52e-01 | 95.5% | 86.1% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.70 | 65.0 | 4.52e-01 | 96.0% | 91.2% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.70 | 64.0 | 4.62e-01 | 95.5% | 91.6% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.70 | 63.0 | 4.53e-01 | 94.5% | 90.9% |
| 4963031 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.69 | 63.0 | 4.33e-01 | 94.5% | 88.4% |
| 3972491 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.69 | 66.0 | 4.61e-01 | 100.0% | 98.3% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.69 | 63.0 | 4.51e-01 | 95.5% | 90.0% |
| 3224725 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.68 | 51.0 | 4.96e-01 | 100.0% | 70.0% |
| 4662300 | 2002.1.1.89 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_26 | 0.64 | 56.0 | 4.67e-01 | 98.5% | 55.3% |
| 4960721 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.61 | 50.0 | 4.62e-01 | 96.5% | 68.0% |
| 4976113 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.58 | 52.0 | 4.36e-01 | 96.0% | 63.8% |
| 4929864 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.58 | 52.0 | 4.30e-01 | 96.0% | 63.4% |
| 4230187 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.56 | 50.0 | 4.24e-01 | 96.0% | 65.8% |
| 4930167 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.56 | 50.0 | 4.22e-01 | 96.0% | 63.3% |
| 3663416 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.56 | 50.0 | 3.78e-01 | 96.0% | 51.0% |
| 4060668 | 2002.1.1.234 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 | 0.54 | 50.0 | 3.36e-01 | 100.0% | 41.6% |
| 4142305 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.52 | 48.0 | 3.70e-01 | 99.5% | 62.7% |
| 3956860 | 2002.1.1.93 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_77 | 0.52 | 46.0 | 3.23e-01 | 95.5% | 56.2% |
| 3999456 | 603.5.1.0 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like | 0.51 | 33.0 | 3.91e-01 | 81.1% | 98.5% |
| 3288509 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.51 | 40.0 | 3.86e-01 | 99.0% | 71.1% |
D3
medium
residues 333-363_397-447
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g9kF01 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.54 | 38.0 | 3.10e-01 | 73.2% | 96.9% |
| 1ultB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 34.0 | 2.22e-01 | 70.7% | 53.4% |