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NC_020874.1__YP_007677184.1__PRSG_00051__00048

Bact-Vir

NC_020874.1__YP_007677184.1__PRSG_00051__00048

Identity

Accession:
NC_020874 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-51
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 47.0 4.43e-01 81.6% 75.8%
2z1qB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 53.0 3.89e-01 93.9% 64.7%
1v9mA03 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.57 49.0 4.01e-01 100.0% 75.0%
2w3sB03 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.55 41.0 3.36e-01 81.6% 80.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3306023 5058.1.1.40 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › PF26576 0.75 62.0 4.68e-01 100.0% 37.5%
4989353 632.12.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Vng1086c-like › Vng1086c-like › UPF0058 0.69 60.0 5.32e-01 95.9% 98.6%
3969883 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.68 58.0 3.77e-01 93.9% 58.0%
3598253 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 41.0 3.83e-01 83.7% 60.0%