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NC_021070.1__YP_007877504.1__VPCG_00003__00003
Bact-VirNC_021070.1__YP_007877504.1__VPCG_00003__00003
Identity
- Accession:
- NC_021070 ↗
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-76
Domain cluster:
rep: IMGVR_UViG_2651870208_000001-2651870208-2654122314__D8-75
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hdiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.74 | 52.0 | 3.19e-01 | 73.9% | 32.2% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 52.0 | 4.45e-01 | 79.7% | 58.2% |
| 1bh9B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.69 | 51.0 | 4.64e-01 | 81.2% | 59.6% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 45.0 | 3.43e-01 | 75.4% | 29.9% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 52.0 | 3.66e-01 | 82.6% | 26.9% |
| 2fnqA02 | 1.20.245.10 | Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 | 0.67 | 52.0 | 3.12e-01 | 81.2% | 41.9% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.66 | 50.0 | 5.18e-01 | 100.0% | 87.7% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 50.0 | 3.71e-01 | 81.2% | 63.6% |
| 2xkrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 50.0 | 3.10e-01 | 85.5% | 61.3% |
| 2ddhA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.63 | 50.0 | 4.04e-01 | 100.0% | 44.7% |
| 3rwlA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 49.0 | 3.08e-01 | 87.0% | 57.7% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 43.0 | 4.51e-01 | 79.7% | 80.6% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 48.0 | 3.72e-01 | 84.1% | 67.8% |
| 3bujA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 50.0 | 3.17e-01 | 92.8% | 78.8% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.60 | 45.0 | 4.09e-01 | 81.2% | 66.3% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 40.0 | 3.24e-01 | 71.0% | 97.0% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.56 | 51.0 | 4.26e-01 | 100.0% | 69.8% |
| 4c0eA01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 42.0 | 2.76e-01 | 84.1% | 24.7% |
| 3tw6B03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 37.0 | 2.25e-01 | 78.3% | 45.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.92 | 84.0 | 5.87e-01 | 100.0% | 35.3% |
| 3973303 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.87 | 80.0 | 6.68e-01 | 100.0% | 61.7% |
| 4211419 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.86 | 59.0 | 4.87e-01 | 72.5% | 42.6% |
| 3981239 | 1049.2.1.3 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 | 0.86 | 79.0 | 7.04e-01 | 100.0% | 72.6% |
| 4957574 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.81 | 70.0 | 6.25e-01 | 100.0% | 68.4% |
| 3524656 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.78 | 68.0 | 5.43e-01 | 100.0% | 51.2% |
| 3224980 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.74 | 49.0 | 4.57e-01 | 72.5% | 55.3% |
| 3436965 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.73 | 67.0 | 5.94e-01 | 98.6% | 76.8% |
| 4369469 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.73 | 59.0 | 4.70e-01 | 88.4% | 46.7% |
| 3846228 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.69 | 51.0 | 4.63e-01 | 81.2% | 60.0% |
| 4032540 | 5069.1.3.10 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › ATP-synt_I | 0.68 | 49.0 | 4.17e-01 | 84.1% | 47.3% |
| 4928145 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.66 | 49.0 | 4.68e-01 | 89.9% | 68.8% |
| 4602819 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.62 | 49.0 | 3.09e-01 | 88.4% | 58.0% |
| 3240217 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.62 | 48.0 | 4.28e-01 | 95.7% | 60.0% |
| 167803 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.61 | 50.0 | 3.17e-01 | 92.8% | 78.8% |
| 3582305 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.60 | 49.0 | 3.48e-01 | 91.3% | 80.9% |
| 3308203 | 601.1.2.80 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Yip1 | 0.59 | 44.0 | 3.22e-01 | 81.2% | 34.0% |
| 3409474 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.54 | 44.0 | 3.66e-01 | 91.3% | 85.6% |
| 3594402 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.53 | 46.0 | 3.62e-01 | 98.6% | 94.0% |
D2
high
residues 87-161
Domain cluster:
rep: OM868081.1__UPT53298.1__X__00028__D88-168
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04865.20 best | Baseplate_J | 42.2 | 1.20e-10 | 97.3% | 83.8% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.83 | 60.0 | 5.59e-01 | 86.7% | 62.2% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.79 | 57.0 | 5.26e-01 | 86.7% | 60.2% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.78 | 68.0 | 6.47e-01 | 100.0% | 81.4% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.78 | 59.0 | 5.97e-01 | 86.7% | 81.3% |
| 1v5vA03 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.77 | 66.0 | 6.66e-01 | 100.0% | 93.3% |
| 1cyyA02 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.68 | 48.0 | 4.06e-01 | 74.7% | 92.8% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 52.0 | 5.12e-01 | 85.3% | 79.5% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 57.0 | 4.95e-01 | 92.0% | 93.6% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 32.0 | 3.59e-01 | 84.0% | 56.9% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 36.0 | 3.25e-01 | 85.3% | 41.2% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 49.0 | 4.52e-01 | 89.3% | 76.0% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 53.0 | 3.50e-01 | 94.7% | 41.2% |
| 2d5mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 47.0 | 3.57e-01 | 84.0% | 59.6% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 47.0 | 3.90e-01 | 85.3% | 80.6% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.64e-01 | 100.0% | 74.0% |
| 2bujB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 45.0 | 4.19e-01 | 81.3% | 89.4% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 47.0 | 4.10e-01 | 89.3% | 62.4% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 40.0 | 3.29e-01 | 73.3% | 54.1% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.57 | 41.0 | 4.08e-01 | 74.7% | 93.4% |
| 2vtwA00 | 2.60.90.30 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Fiber protein 1, C-terminal domain | 0.57 | 44.0 | 3.36e-01 | 89.3% | 81.0% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 4.18e-01 | 72.0% | 90.0% |
| 4ckbD02 | 3.20.100.20 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › | 0.56 | 42.0 | 3.18e-01 | 84.0% | 52.7% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 42.0 | 3.83e-01 | 84.0% | 76.2% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 47.0 | 4.15e-01 | 94.7% | 78.0% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.54 | 44.0 | 3.37e-01 | 96.0% | 49.8% |
| 3ihmA02 | 3.30.9.40 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.54 | 46.0 | 3.83e-01 | 100.0% | 65.3% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.54 | 41.0 | 3.58e-01 | 81.3% | 64.9% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.53 | 43.0 | 3.77e-01 | 88.0% | 80.2% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.53 | 39.0 | 3.98e-01 | 81.3% | 80.8% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.86e-01 | 80.0% | 93.8% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.87e-01 | 78.7% | 93.2% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 3.96e-01 | 85.3% | 95.1% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.63e-01 | 76.0% | 72.3% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.01e-01 | 82.7% | 98.6% |
| 2i82B00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.52 | 45.0 | 3.30e-01 | 100.0% | 37.4% |
| 1j8rA00 | 2.60.40.1370 | Mainly Beta › Sandwich › Immunoglobulin-like › Bacterial adhesin receptor binding domain | 0.52 | 43.0 | 3.33e-01 | 100.0% | 83.7% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.51 | 43.0 | 3.90e-01 | 100.0% | 74.3% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.81e-01 | 72.0% | 100.0% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.51 | 42.0 | 3.68e-01 | 98.7% | 99.2% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.50 | 43.0 | 4.08e-01 | 100.0% | 81.6% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.50 | 42.0 | 3.72e-01 | 97.3% | 75.9% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.93 | 88.0 | 6.31e-01 | 100.0% | 41.1% |
| 4580145 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.93 | 88.0 | 8.35e-01 | 100.0% | 91.8% |
| 3946545 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.87 | 81.0 | 7.78e-01 | 100.0% | 89.4% |
| 5038126 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.83 | 64.0 | 6.42e-01 | 100.0% | 81.3% |
| 3963908 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.82 | 63.0 | 6.50e-01 | 100.0% | 87.1% |
| 3947742 | 1.1.8.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J | 0.81 | 75.0 | 7.16e-01 | 100.0% | 88.2% |
| 3822839 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.79 | 64.0 | 6.14e-01 | 100.0% | 76.5% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.79 | 63.0 | 5.78e-01 | 85.3% | 76.8% |
| 4123849 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.78 | 68.0 | 6.51e-01 | 100.0% | 82.4% |
| 5041607 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 59.0 | 5.96e-01 | 84.0% | 81.1% |
| 4956199 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.78 | 66.0 | 6.22e-01 | 100.0% | 76.7% |
| 3597274 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.77 | 66.0 | 6.44e-01 | 100.0% | 86.3% |
| 3385440 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.76 | 66.0 | 6.53e-01 | 100.0% | 90.0% |
| 5034375 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.76 | 66.0 | 6.15e-01 | 100.0% | 77.8% |
| 3600462 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 59.0 | 5.77e-01 | 86.7% | 77.5% |
| 3504270 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.73 | 60.0 | 3.85e-01 | 88.0% | 31.9% |
| 3282462 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.73 | 59.0 | 5.95e-01 | 100.0% | 88.0% |
| 3950185 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.72 | 63.0 | 5.96e-01 | 100.0% | 80.0% |
| 3991944 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.72 | 60.0 | 4.08e-01 | 92.0% | 41.9% |
| 5055336 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.72 | 65.0 | 6.10e-01 | 100.0% | 92.2% |
| 3517676 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 57.0 | 4.88e-01 | 86.7% | 80.0% |
| 3792511 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.71 | 59.0 | 3.81e-01 | 92.0% | 31.8% |
| 4991129 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 54.0 | 5.27e-01 | 88.0% | 73.8% |
| 4988964 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.71 | 63.0 | 6.11e-01 | 100.0% | 96.5% |
| 4990285 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.70 | 63.0 | 5.95e-01 | 100.0% | 88.8% |
| 3171970 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.70 | 61.0 | 5.82e-01 | 100.0% | 93.3% |
| 4949489 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 60.0 | 5.83e-01 | 100.0% | 97.6% |
| 3480049 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.69 | 58.0 | 3.69e-01 | 92.0% | 31.1% |
| 3895174 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.67 | 56.0 | 3.59e-01 | 90.7% | 33.1% |
| 3821402 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 54.0 | 4.72e-01 | 86.7% | 74.5% |
| 3917309 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.67 | 56.0 | 3.62e-01 | 90.7% | 34.7% |
| 4457938 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.66 | 53.0 | 4.51e-01 | 88.0% | 55.2% |
| 3783617 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.66 | 46.0 | 4.56e-01 | 73.3% | 100.0% |
| 4644809 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 52.0 | 4.56e-01 | 88.0% | 60.0% |
| 4542561 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.65 | 52.0 | 4.62e-01 | 88.0% | 61.8% |
| 4328639 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.65 | 57.0 | 5.31e-01 | 100.0% | 84.2% |
| 3198697 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.62 | 52.0 | 3.38e-01 | 90.7% | 32.5% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.63e-01 | 81.3% | 95.9% |
| 5055120 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.60 | 42.0 | 3.69e-01 | 74.7% | 95.7% |
| 3970225 | 1.1.13.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 | 0.59 | 45.0 | 4.27e-01 | 85.3% | 68.9% |
| 3225094 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.58 | 49.0 | 3.53e-01 | 96.0% | 44.8% |
| 3879432 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 48.0 | 4.50e-01 | 100.0% | 73.0% |
| 3463187 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.58 | 51.0 | 3.38e-01 | 100.0% | 45.4% |
| 3485387 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.11e-01 | 74.7% | 98.7% |
| 5064199 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 47.0 | 4.54e-01 | 97.3% | 98.9% |
| 3708407 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.56 | 41.0 | 3.96e-01 | 78.7% | 100.0% |
| 3272090 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.56 | 48.0 | 3.43e-01 | 100.0% | 46.1% |
| 3972102 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 39.0 | 3.60e-01 | 76.0% | 62.0% |
| 3927342 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 43.0 | 3.98e-01 | 100.0% | 68.0% |
| 3935807 | 10.32.1.258 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N | 0.53 | 42.0 | 4.06e-01 | 100.0% | 75.6% |
| 3976897 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 43.0 | 3.81e-01 | 98.7% | 83.2% |
| 4012945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.89e-01 | 78.7% | 100.0% |
| 3227984 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.52 | 43.0 | 4.06e-01 | 100.0% | 80.0% |
| 3937610 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.50 | 36.0 | 3.12e-01 | 76.0% | 96.8% |
| 3238303 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.79e-01 | 100.0% | 81.8% |
D3
medium
residues 173-269
Domain cluster:
rep: AB605730.1__BAK52969.1__X__00157__D176-258
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26078.1 best | Baseplate_J_M | 66.3 | 3.40e-18 | 84.5% | 91.8% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h2tA01 | 3.30.300.200 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.80 | 55.0 | 6.34e-01 | 81.4% | 97.2% |
| 5gxdA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.78 | 56.0 | 4.99e-01 | 82.5% | 54.1% |
| 1nnnA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.78 | 55.0 | 5.04e-01 | 82.5% | 57.9% |
| 7xbsA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.78 | 46.0 | 5.47e-01 | 82.5% | 86.6% |
| 6vhvA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.77 | 49.0 | 5.06e-01 | 82.5% | 67.7% |
| 4futA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.76 | 51.0 | 5.02e-01 | 81.4% | 63.8% |
| 4isbB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.76 | 55.0 | 5.34e-01 | 82.5% | 68.2% |
| 1lciA04 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.75 | 51.0 | 5.15e-01 | 82.5% | 68.7% |
| 2vsqA06 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.75 | 50.0 | 4.87e-01 | 82.5% | 62.9% |
| 5uptA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.75 | 51.0 | 4.96e-01 | 82.5% | 63.6% |
| 3nyqA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.74 | 50.0 | 5.33e-01 | 82.5% | 79.1% |
| 8affD01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.74 | 50.0 | 5.55e-01 | 82.5% | 87.2% |
| 6ulxA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.74 | 50.0 | 5.13e-01 | 83.5% | 72.8% |
| 1amuA04 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.72 | 47.0 | 4.80e-01 | 82.5% | 67.7% |
| 1yj7D02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.70 | 48.0 | 5.10e-01 | 84.5% | 79.3% |
| 2z51A02 | 3.30.300.130 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) | 0.68 | 47.0 | 5.32e-01 | 83.5% | 97.2% |
| 5u89A01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.67 | 48.0 | 4.93e-01 | 87.6% | 78.3% |
| 2idbA02 | 3.40.1670.10 | Alpha Beta › 3-Layer(aba) Sandwich › UbiD C-terminal domain-like › UbiD C-terminal domain-like | 0.64 | 40.0 | 3.77e-01 | 77.3% | 51.7% |
| 3e7wA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.63 | 50.0 | 4.76e-01 | 86.6% | 72.1% |
| 6gmhK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.60 | 38.0 | 3.61e-01 | 71.1% | 53.0% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.59 | 37.0 | 3.84e-01 | 72.2% | 66.0% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 41.0 | 3.78e-01 | 93.8% | 56.5% |
| 2dnmA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 36.0 | 3.62e-01 | 83.5% | 66.0% |
| 1vx7Q02 | 3.30.60.300 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.53 | 19.0 | 3.09e-01 | 70.1% | 90.6% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 46.0 | 3.90e-01 | 97.9% | 77.9% |
| 1f5aA01 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.52 | 40.0 | 3.89e-01 | 83.5% | 76.6% |
| 1x4eA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 34.0 | 3.62e-01 | 82.5% | 77.6% |
| 6hxiA01 | 3.30.470.110 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.51 | 36.0 | 2.95e-01 | 75.3% | 41.7% |
| 2i79D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 44.0 | 3.73e-01 | 97.9% | 67.7% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 44.0 | 3.78e-01 | 97.9% | 75.3% |
| 3nw0A03 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 28.0 | 3.38e-01 | 95.9% | 87.9% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4636522 | 327.20.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 | 0.98 | 79.0 | 8.45e-01 | 82.5% | 94.1% |
| 1870491 | 327.20.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › Gp6_C-I | 0.84 | 58.0 | 6.66e-01 | 81.4% | 95.8% |
| 4140245 | 327.20.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 | 0.84 | 60.0 | 6.79e-01 | 78.4% | 94.7% |
| 4947284 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.80 | 56.0 | 5.09e-01 | 82.5% | 56.0% |
| 3247481 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.79 | 45.0 | 5.52e-01 | 72.2% | 90.0% |
| 3797687 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.79 | 56.0 | 4.98e-01 | 82.5% | 53.8% |
| 4980949 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.79 | 56.0 | 5.93e-01 | 82.5% | 82.4% |
| 3629594 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.79 | 53.0 | 5.22e-01 | 82.5% | 63.8% |
| 4033978 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.79 | 51.0 | 5.22e-01 | 82.5% | 67.4% |
| 3010760 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.78 | 48.0 | 5.33e-01 | 82.5% | 77.9% |
| 4681059 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.78 | 55.0 | 4.83e-01 | 82.5% | 51.9% |
| 4980948 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 54.0 | 5.77e-01 | 82.5% | 82.4% |
| 5005883 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 53.0 | 5.25e-01 | 82.5% | 68.0% |
| 3347693 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 52.0 | 4.89e-01 | 81.4% | 58.3% |
| 4979061 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 53.0 | 5.24e-01 | 82.5% | 68.0% |
| 3760585 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.77 | 48.0 | 4.83e-01 | 82.5% | 62.0% |
| 3285049 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.77 | 52.0 | 5.16e-01 | 82.5% | 67.0% |
| 3744741 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 52.0 | 5.14e-01 | 82.5% | 67.0% |
| 3959346 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 54.0 | 4.94e-01 | 82.5% | 56.8% |
| 4980950 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 49.0 | 5.04e-01 | 74.2% | 67.4% |
| 4301550 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 55.0 | 5.34e-01 | 83.5% | 68.6% |
| 3525048 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 48.0 | 4.81e-01 | 82.5% | 62.0% |
| 5053617 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.76 | 51.0 | 5.01e-01 | 82.5% | 63.8% |
| 3954086 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.75 | 50.0 | 4.82e-01 | 83.5% | 60.0% |
| 4985804 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.75 | 53.0 | 5.82e-01 | 84.5% | 88.7% |
| 3289528 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.75 | 52.0 | 5.19e-01 | 82.5% | 70.0% |
| 3275397 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.74 | 52.0 | 4.63e-01 | 82.5% | 52.2% |
| 4642999 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.74 | 51.0 | 5.05e-01 | 82.5% | 68.0% |
| 3732732 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.74 | 55.0 | 5.08e-01 | 82.5% | 62.7% |
| 3202023 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.74 | 54.0 | 4.82e-01 | 82.5% | 54.8% |
| 4809219 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.74 | 46.0 | 5.19e-01 | 76.3% | 81.6% |
| 3956692 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.72 | 50.0 | 4.78e-01 | 81.4% | 62.7% |
| 3674608 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.72 | 56.0 | 5.95e-01 | 83.5% | 92.9% |
| 3361731 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.72 | 56.0 | 5.44e-01 | 83.5% | 75.2% |
| 3446415 | 327.2.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA | 0.71 | 51.0 | 5.15e-01 | 84.5% | 74.7% |
| 3729922 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.71 | 53.0 | 4.74e-01 | 81.4% | 57.7% |
| 3917573 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.71 | 51.0 | 4.94e-01 | 82.5% | 66.4% |
| 3947856 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.71 | 52.0 | 4.88e-01 | 82.5% | 64.3% |
| 3970554 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.70 | 51.0 | 4.59e-01 | 81.4% | 54.8% |
| 5071431 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.70 | 50.0 | 5.55e-01 | 83.5% | 94.7% |
| 283585 | 327.13.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF | 0.70 | 48.0 | 4.89e-01 | 83.5% | 71.1% |
| 3332785 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.70 | 55.0 | 5.44e-01 | 83.5% | 80.0% |
| 4063755 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.69 | 54.0 | 4.03e-01 | 86.6% | 35.1% |
| 3646034 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.69 | 52.0 | 4.45e-01 | 83.5% | 50.7% |
| 4955280 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.69 | 46.0 | 5.26e-01 | 83.5% | 94.3% |
| 3735104 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.69 | 54.0 | 4.54e-01 | 82.5% | 54.8% |
| 1712134 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.68 | 57.0 | 5.38e-01 | 88.7% | 76.3% |
| 5008332 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.68 | 53.0 | 4.46e-01 | 81.4% | 67.7% |
| 3684154 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.68 | 47.0 | 5.13e-01 | 77.3% | 86.3% |
| 4026432 | 327.4.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain | 0.67 | 53.0 | 5.40e-01 | 84.5% | 94.7% |
| 1888440 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.67 | 53.0 | 5.08e-01 | 91.8% | 74.3% |
| 4029257 | 327.6.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU | 0.65 | 49.0 | 5.31e-01 | 81.4% | 95.0% |
| 3502850 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.65 | 51.0 | 4.54e-01 | 82.5% | 66.7% |
| 3600938 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.65 | 50.0 | 4.52e-01 | 81.4% | 65.4% |
| 3387430 | 327.6.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU | 0.64 | 45.0 | 4.89e-01 | 81.4% | 88.7% |
| 3713450 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.64 | 49.0 | 4.40e-01 | 81.4% | 62.2% |
| 4017277 | 323.1.1.28 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding_C | 0.64 | 57.0 | 3.69e-01 | 99.0% | 57.5% |
| 3709745 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 48.0 | 4.15e-01 | 81.4% | 65.8% |
| 3958042 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 52.0 | 4.97e-01 | 94.8% | 76.4% |
| 3649138 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.63 | 52.0 | 4.05e-01 | 88.7% | 47.8% |
| 3691474 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 56.0 | 3.85e-01 | 100.0% | 69.1% |
| 3666798 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 51.0 | 4.81e-01 | 86.6% | 77.4% |
| 3365471 | 327.5.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 | 0.61 | 47.0 | 4.22e-01 | 81.4% | 62.4% |
| 3295277 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 53.0 | 3.40e-01 | 100.0% | 68.6% |
| 2516842 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 54.0 | 3.65e-01 | 99.0% | 70.1% |
| 3233882 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.58 | 46.0 | 4.26e-01 | 92.8% | 67.5% |
| 3593794 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.54 | 29.0 | 3.56e-01 | 89.7% | 89.1% |
| 4011434 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 29.0 | 2.97e-01 | 90.7% | 52.6% |
| 3388125 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 21.0 | 2.95e-01 | 81.4% | 77.8% |
D4
medium
residues 273-352
Domain cluster:
rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26079.1 best | Baseplate_J_C | 51.1 | 1.70e-13 | 95.0% | 96.4% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7rsfA01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 53.0 | 4.63e-01 | 78.8% | 100.0% |
| 1u0sA00 | 3.30.70.1110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Histidine kinase CheA-like, P2 response regulator-binding domain | 0.67 | 48.0 | 4.73e-01 | 75.0% | 100.0% |
| 4aw9A00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 54.0 | 3.80e-01 | 93.8% | 85.9% |
| 3it4D02 | 3.10.20.340 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › ArgJ beta chain, C-terminal domain | 0.64 | 56.0 | 5.00e-01 | 100.0% | 81.5% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 46.0 | 4.67e-01 | 76.2% | 90.0% |
| 4u5pA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.64 | 50.0 | 4.17e-01 | 85.0% | 91.4% |
| 2aajA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.63 | 50.0 | 4.27e-01 | 85.0% | 86.0% |
| 3m21F00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.62 | 37.0 | 3.98e-01 | 97.5% | 70.1% |
| 1j27A00 | 3.30.70.1120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like | 0.60 | 47.0 | 4.48e-01 | 87.5% | 98.0% |
| 3zyvC06 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.57 | 39.0 | 2.81e-01 | 72.5% | 72.6% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.56 | 43.0 | 4.08e-01 | 83.7% | 81.2% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.54 | 39.0 | 3.96e-01 | 78.8% | 96.3% |
| 2pjhB02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.54 | 45.0 | 4.20e-01 | 100.0% | 73.6% |
| 2qycA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 3.97e-01 | 88.7% | 97.1% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.95e-01 | 86.3% | 73.8% |
| 1vmfC00 | 2.60.120.460 | Mainly Beta › Sandwich › Jelly Rolls › YjbQ-like | 0.53 | 36.0 | 3.11e-01 | 70.0% | 83.0% |
| 3p24C02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.53 | 42.0 | 3.19e-01 | 87.5% | 88.1% |
| 5jeaD00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 41.0 | 3.06e-01 | 88.7% | 44.2% |
| 1xaxA00 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.52 | 38.0 | 3.20e-01 | 78.8% | 90.3% |
| 1r5pB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 41.0 | 3.97e-01 | 90.0% | 100.0% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 41.0 | 3.55e-01 | 91.3% | 100.0% |
| 1b3mA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.51 | 41.0 | 3.19e-01 | 90.0% | 50.3% |
| 3cswC01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.51 | 43.0 | 3.98e-01 | 98.8% | 91.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4453960 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.97 | 91.0 | 9.14e-01 | 97.5% | 98.8% |
| 4093853 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.96 | 92.0 | 9.08e-01 | 100.0% | 98.8% |
| 4565831 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.90 | 84.0 | 8.01e-01 | 98.8% | 97.8% |
| 4957578 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.89 | 82.0 | 7.91e-01 | 100.0% | 98.9% |
| 3943567 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.86 | 79.0 | 7.31e-01 | 100.0% | 100.0% |
| 1870475 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.77 | 69.0 | 6.64e-01 | 100.0% | 94.5% |
| 3977755 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.76 | 67.0 | 6.61e-01 | 98.8% | 98.8% |
| 3175966 | 283.1.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase | 0.67 | 52.0 | 4.60e-01 | 85.0% | 83.2% |
| 4947478 | 304.26.1.0 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like | 0.63 | 51.0 | 4.83e-01 | 87.5% | 91.6% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.60 | 43.0 | 4.09e-01 | 75.0% | 94.7% |
| 4488173 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 48.0 | 4.63e-01 | 88.7% | 91.1% |
| 3958005 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.58 | 43.0 | 3.08e-01 | 77.5% | 79.1% |
| 3590646 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.57 | 41.0 | 3.60e-01 | 76.2% | 82.4% |
| 4964939 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.55 | 45.0 | 4.28e-01 | 100.0% | 78.9% |
| 5001339 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.53 | 43.0 | 4.36e-01 | 97.5% | 92.5% |
| 4996908 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.52 | 39.0 | 3.82e-01 | 81.2% | 92.0% |
| 3255740 | 229.1.1.3 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N | 0.51 | 42.0 | 4.25e-01 | 98.8% | 96.2% |