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NC_021070.1__YP_007877543.1__VPCG_00042__00042
Bact-VirNC_021070.1__YP_007877543.1__VPCG_00042__00042
Identity
- Accession:
- NC_021070 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-82
Domain cluster:
rep: NC_019457.1__YP_007003049.1__F353_gp09__00009__D5-76
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 36.0 | 3.98e-01 | 100.0% | 73.4% |
| 4ew5A00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.52 | 38.0 | 3.56e-01 | 77.8% | 82.4% |
| 1io1A02 | 2.170.280.10 | Mainly Beta › Beta Complex › f41 fragment of flagellin, middle domain › f41 fragment of flagellin, middle domain | 0.50 | 42.0 | 3.64e-01 | 95.1% | 64.9% |
| 4i66A00 | 3.40.50.12140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Domain of unknown function DUF4159 | 0.50 | 39.0 | 2.98e-01 | 85.2% | 95.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959385 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.66 | 56.0 | 5.84e-01 | 96.3% | 98.7% |
| 5012352 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.63 | 51.0 | 5.08e-01 | 96.3% | 83.5% |
| 5030390 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.60 | 48.0 | 4.75e-01 | 95.1% | 83.1% |
| 5028140 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.58 | 47.0 | 4.90e-01 | 98.8% | 97.3% |
| 3225764 | 840.1.1.0 ↗ | a+b two layers › RPB5-like RNA polymerase subunit › RPB5-like RNA polymerase subunit › RPB5-like RNA polymerase subunit | 0.58 | 40.0 | 4.55e-01 | 76.5% | 98.3% |
| 4526691 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.54 | 39.0 | 4.26e-01 | 74.1% | 98.5% |
| 3874132 | 220.1.1.170 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin | 0.53 | 35.0 | 3.19e-01 | 93.8% | 48.7% |
| 5041767 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.50 | 37.0 | 3.50e-01 | 95.1% | 62.9% |
| 3964100 | 2485.1.1.16 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › ArsC | 0.50 | 40.0 | 3.64e-01 | 88.9% | 78.3% |