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YP_008059080.1
Arc-VirNC_021327__YP_008059080.1__M200-gp038__00038
Identity
- Accession:
- NC_021327 ↗
- Protein ID:
- YP_008059080.1 ↗
- Kingdom:
- archaea
Quality
77.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Thumleimavirales›
Druskaviridae›
Tredecimvirus›
Halovirus_HCTV-5
TaxID: 1273748
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 127-239
Domain cluster:
rep: IMGVR_UViG_3300000193_000135-3300000193-SI47jul10_135mDRAFT_10031922__D19-143
D2
medium
residues 1-58
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x3cA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.80 | 52.0 | 4.77e-01 | 70.7% | 53.4% |
| 1llmD02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 37.0 | 3.85e-01 | 94.8% | 78.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3178202 | 386.1.1.38 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zap1_zf2 | 0.75 | 46.0 | 5.53e-01 | 77.6% | 92.5% |
| 3509728 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 47.0 | 4.89e-01 | 75.9% | 87.3% |
| 4000273 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.65 | 54.0 | 4.10e-01 | 89.7% | 93.8% |
| 3226056 | 708.1.1.29 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF29862, PF29863 | 0.63 | 49.0 | 3.68e-01 | 82.8% | 88.9% |
| 3563573 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 49.0 | 4.51e-01 | 93.1% | 82.5% |
| 3994166 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.62 | 49.0 | 3.30e-01 | 86.2% | 24.5% |
| 3220559 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 46.0 | 4.94e-01 | 81.0% | 100.0% |
| 3905709 | 243.3.1.22 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cyto_heme_lyase | 0.55 | 42.0 | 2.90e-01 | 79.3% | 48.9% |
| 3616210 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 42.0 | 3.81e-01 | 87.9% | 60.0% |
| 3728850 | 210.1.4.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 | 0.53 | 47.0 | 2.87e-01 | 100.0% | 18.8% |
| 3391714 | 377.1.1.18 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD | 0.51 | 39.0 | 3.44e-01 | 81.0% | 68.8% |