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YP_008059132.1

Arc-Vir

NC_021327__YP_008059132.1__M200-gp134__00090

Identity

Accession:
NC_021327 ↗
Protein ID:
YP_008059132.1 ↗
Kingdom:
archaea

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-103
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cs4A01 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 38.0 4.53e-01 70.2% 100.0%
2c43A01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.55 38.0 3.21e-01 71.4% 46.2%
4i9oA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.55 40.0 4.15e-01 77.4% 100.0%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.52 29.0 2.90e-01 91.7% 46.7%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 27.0 3.03e-01 76.2% 64.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3475654 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.64 50.0 4.16e-01 85.7% 59.3%
3393615 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.60 45.0 4.14e-01 81.0% 93.6%
3602701 3352.1.1.1 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 0.59 44.0 2.74e-01 79.8% 98.9%