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YP_008059138.1

Arc-Vir

NC_021327__YP_008059138.1__M200-gp128__00096

Identity

Accession:
NC_021327 ↗
Protein ID:
YP_008059138.1 ↗
Kingdom:
archaea

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-147
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 67.0 5.53e-01 97.2% 47.9%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 68.0 5.57e-01 97.9% 48.8%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 68.0 5.57e-01 99.3% 50.2%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 66.0 5.38e-01 97.2% 48.6%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 68.0 5.47e-01 97.9% 48.1%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 65.0 7.20e-01 100.0% 100.0%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 67.0 7.25e-01 96.6% 98.4%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 66.0 5.43e-01 95.9% 50.4%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 67.0 5.47e-01 97.9% 49.4%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 65.0 5.76e-01 97.9% 60.8%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 64.0 7.01e-01 95.9% 99.2%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 66.0 5.33e-01 98.6% 48.6%
1jqlA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 62.0 6.85e-01 98.6% 98.3%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 63.0 5.96e-01 97.2% 69.2%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 62.0 5.56e-01 97.9% 60.1%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 63.0 6.90e-01 100.0% 99.2%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 62.0 6.76e-01 97.9% 96.7%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 60.0 6.74e-01 96.6% 100.0%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 62.0 6.69e-01 98.6% 95.9%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 62.0 5.13e-01 97.2% 49.2%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 61.0 6.62e-01 98.6% 95.2%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 64.0 6.84e-01 95.9% 96.9%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 59.0 6.63e-01 96.6% 100.0%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 64.0 6.72e-01 98.6% 94.6%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 61.0 6.59e-01 97.2% 95.9%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 58.0 4.92e-01 90.3% 50.2%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 64.0 5.18e-01 96.6% 49.0%
3t0pA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 60.0 5.65e-01 97.9% 68.6%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 61.0 6.51e-01 100.0% 94.5%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 63.0 6.78e-01 100.0% 99.2%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 62.0 6.53e-01 98.6% 96.2%
4trtA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 56.0 6.18e-01 99.3% 95.8%
4tr6A01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 62.0 5.73e-01 98.6% 70.6%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.71 62.0 6.29e-01 100.0% 93.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.71 66.0 5.26e-01 99.3% 53.5%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.66 59.0 4.64e-01 95.2% 50.2%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.66 60.0 4.74e-01 100.0% 50.7%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.59 37.0 4.18e-01 95.9% 85.4%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.51 25.0 3.30e-01 75.2% 84.8%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 18.0 2.78e-01 91.7% 78.9%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.51 30.0 3.43e-01 74.5% 80.0%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 70.0 7.68e-01 97.9% 98.3%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 68.0 7.51e-01 97.9% 98.3%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 68.0 7.46e-01 97.9% 98.3%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 68.0 7.44e-01 97.9% 98.3%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 68.0 7.44e-01 97.9% 98.3%
5990 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 68.0 7.39e-01 97.9% 96.7%
4995027 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 66.0 7.12e-01 98.6% 93.6%
5027066 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 69.0 7.39e-01 99.3% 97.6%
5070586 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 68.0 7.35e-01 98.6% 96.8%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 68.0 7.27e-01 98.6% 96.0%
4870150 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 69.0 7.23e-01 97.9% 92.5%
2392830 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 69.0 7.23e-01 100.0% 94.7%
1822927 227.1.1.2 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 69.0 6.59e-01 97.9% 76.1%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 66.0 7.09e-01 97.9% 95.2%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 64.0 6.99e-01 98.6% 95.8%
4941928 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 66.0 7.27e-01 98.6% 100.0%
5044014 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 64.0 7.10e-01 93.1% 100.0%
4998584 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 72.0 7.43e-01 99.3% 97.0%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 65.0 7.04e-01 97.9% 95.2%
4142781 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 66.0 7.14e-01 98.6% 96.8%
5047575 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 66.0 7.13e-01 97.9% 96.8%
4983064 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 67.0 7.21e-01 97.9% 98.4%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 68.0 7.32e-01 97.9% 100.0%
4057537 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 65.0 7.02e-01 97.9% 96.0%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 68.0 7.31e-01 98.6% 100.0%
4937819 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 66.0 7.11e-01 97.9% 97.6%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 66.0 7.06e-01 97.9% 96.8%
3602548 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 65.0 6.99e-01 97.9% 96.0%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 66.0 7.07e-01 99.3% 97.6%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 66.0 7.02e-01 99.3% 96.1%
4987602 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 65.0 6.98e-01 97.2% 96.8%
2492036 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 65.0 6.87e-01 98.6% 93.8%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 67.0 7.02e-01 99.3% 95.5%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 65.0 6.97e-01 97.9% 97.6%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 65.0 6.87e-01 99.3% 96.1%
4047098 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 64.0 7.00e-01 97.2% 100.0%
4315973 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 65.0 6.97e-01 97.2% 97.6%
5023031 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 65.0 6.92e-01 99.3% 98.4%
3351110 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 64.0 6.96e-01 92.4% 100.0%
4251800 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 64.0 6.76e-01 100.0% 93.1%
4025728 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 61.0 6.82e-01 98.6% 100.0%
2878151 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 62.0 6.76e-01 97.2% 96.7%
1871494 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 61.0 6.63e-01 97.9% 95.0%
158230 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 66.0 7.00e-01 97.9% 98.4%
1549269 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 62.0 6.71e-01 98.6% 96.7%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 66.0 6.93e-01 98.6% 97.7%
4480621 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.78 60.0 6.61e-01 97.9% 96.7%
4650306 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.78 61.0 6.68e-01 97.2% 97.5%
3963789 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.78 61.0 6.71e-01 97.9% 98.3%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 64.0 6.72e-01 97.9% 95.4%
4876748 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.78 62.0 6.66e-01 100.0% 96.8%
4043935 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 65.0 6.91e-01 99.3% 98.5%
5000467 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 68.0 7.08e-01 98.6% 99.3%
3719143 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 66.0 6.90e-01 98.6% 97.0%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 64.0 6.84e-01 96.6% 100.0%
4860663 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.77 61.0 6.28e-01 98.6% 85.7%
2878142 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.77 60.0 6.51e-01 98.6% 95.9%
2987540 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.77 60.0 6.37e-01 98.6% 90.8%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 63.0 6.80e-01 97.2% 100.0%
3597091 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 61.0 6.62e-01 97.9% 97.6%
143267 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 62.0 6.59e-01 97.2% 96.9%
144176 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.76 62.0 6.72e-01 100.0% 99.2%
2476832 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.76 64.0 6.60e-01 100.0% 94.1%
4038410 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.76 67.0 6.88e-01 97.2% 97.9%
3230925 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.76 63.0 6.68e-01 97.9% 97.7%
3478161 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 65.0 6.79e-01 97.2% 97.8%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 61.0 6.45e-01 94.5% 94.6%
3798354 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 66.0 6.86e-01 95.9% 99.3%
4591776 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.75 61.0 6.44e-01 100.0% 94.6%
3623607 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 68.0 6.90e-01 100.0% 98.6%
3719938 227.1.1.17 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.75 67.0 6.89e-01 100.0% 97.9%
5039218 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 64.0 6.71e-01 98.6% 100.0%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.75 61.0 6.46e-01 94.5% 95.4%
2492033 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.75 66.0 6.72e-01 100.0% 95.0%
4460660 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.75 63.0 6.55e-01 100.0% 94.8%
3613685 227.1.1.17 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.75 66.0 6.76e-01 99.3% 96.4%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.74 68.0 6.07e-01 97.9% 79.0%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.74 68.0 6.52e-01 98.6% 93.3%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.74 62.0 6.41e-01 97.9% 94.8%
3503503 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.73 68.0 6.80e-01 97.2% 97.9%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.73 67.0 6.82e-01 99.3% 100.0%
3789625 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.73 63.0 6.50e-01 94.5% 97.0%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.73 68.0 6.66e-01 99.3% 97.4%
3939755 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.73 66.0 6.56e-01 100.0% 93.9%
3625037 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.72 62.0 6.44e-01 94.5% 97.0%
3789624 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.72 65.0 6.67e-01 98.6% 99.3%
3534499 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.72 67.0 6.72e-01 97.9% 97.9%
2141304 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.72 61.0 6.46e-01 99.3% 98.5%
3625038 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.72 65.0 6.62e-01 98.6% 99.3%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.71 65.0 6.59e-01 97.2% 100.0%
3193266 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.71 66.0 6.65e-01 99.3% 99.3%
3507498 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.71 65.0 6.50e-01 98.6% 98.0%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.71 65.0 6.63e-01 98.6% 100.0%
4995744 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.70 56.0 5.99e-01 99.3% 97.6%
5074320 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.70 58.0 6.13e-01 98.6% 99.2%
3791518 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.66 50.0 5.50e-01 93.1% 95.0%
D2 high residues 161-279
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 78.0 5.99e-01 100.0% 79.6%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 71.0 5.61e-01 91.6% 49.8%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 72.0 7.25e-01 98.3% 95.0%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 76.0 5.89e-01 100.0% 78.2%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 74.0 6.09e-01 98.3% 59.3%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 72.0 5.55e-01 98.3% 46.5%
1jqlA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 72.0 7.23e-01 98.3% 95.8%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 72.0 5.56e-01 97.5% 48.2%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 67.0 6.61e-01 89.1% 91.9%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 72.0 6.03e-01 97.5% 59.6%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 5.68e-01 100.0% 77.5%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 70.0 7.07e-01 99.2% 95.8%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 71.0 7.16e-01 99.2% 96.7%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 71.0 5.49e-01 96.6% 47.5%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 67.0 6.75e-01 90.8% 90.0%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 73.0 5.65e-01 100.0% 78.0%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 72.0 7.07e-01 99.2% 96.1%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 71.0 5.36e-01 98.3% 43.5%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 72.0 5.46e-01 100.0% 77.5%
3t0pA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 65.0 5.71e-01 90.8% 62.8%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 70.0 6.89e-01 98.3% 95.2%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 65.0 6.44e-01 90.8% 87.7%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 64.0 5.57e-01 89.9% 63.4%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 68.0 6.65e-01 98.3% 93.8%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 63.0 6.49e-01 89.1% 93.8%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 67.0 6.32e-01 96.6% 90.1%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.75 68.0 5.24e-01 98.3% 49.0%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 63.0 6.23e-01 89.9% 87.8%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.73 62.0 6.20e-01 91.6% 87.1%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.73 63.0 6.10e-01 91.6% 90.1%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.73 61.0 6.27e-01 89.1% 93.8%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.72 64.0 6.27e-01 98.3% 89.1%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.71 66.0 5.10e-01 100.0% 48.6%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.70 61.0 4.85e-01 98.3% 48.7%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2392831 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 77.0 7.52e-01 96.6% 95.3%
3015239 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.82 73.0 7.36e-01 98.3% 94.1%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 72.0 7.18e-01 92.4% 95.8%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 76.0 7.49e-01 98.3% 94.4%
5037314 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 76.0 7.65e-01 98.3% 98.3%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 76.0 7.41e-01 98.3% 92.2%
4983064 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 76.0 7.51e-01 98.3% 96.0%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.41e-01 99.2% 90.8%
4232371 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 75.0 7.48e-01 96.6% 95.8%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.28e-01 99.2% 90.4%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.49e-01 99.2% 94.4%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 7.47e-01 97.5% 96.7%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 7.22e-01 98.3% 92.5%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 74.0 7.43e-01 96.6% 98.3%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 74.0 7.38e-01 96.6% 95.8%
4934002 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.35e-01 99.2% 91.5%
3351103 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 7.09e-01 98.3% 89.6%
4646871 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 75.0 7.39e-01 99.2% 95.2%
309454 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 75.0 7.19e-01 99.2% 90.2%
4162061 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 74.0 7.35e-01 99.2% 95.1%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 72.0 7.20e-01 98.3% 95.0%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 7.29e-01 98.3% 96.0%
2392242 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 64.0 6.62e-01 91.6% 89.4%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 7.34e-01 99.2% 96.0%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 67.0 6.72e-01 90.8% 87.5%
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 73.0 7.28e-01 98.3% 96.0%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 69.0 6.78e-01 91.6% 93.6%
5979 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 72.0 7.16e-01 98.3% 93.5%
4500973 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.79 73.0 7.20e-01 99.2% 94.3%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 74.0 7.21e-01 99.2% 93.0%
4929645 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 7.23e-01 98.3% 95.2%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 68.0 6.71e-01 90.8% 88.8%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 73.0 6.80e-01 98.3% 87.4%
4027851 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 68.0 6.32e-01 91.6% 91.7%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 72.0 7.01e-01 98.3% 89.3%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 68.0 6.80e-01 90.8% 90.0%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 69.0 6.74e-01 93.3% 90.6%
2805173 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 7.10e-01 98.3% 93.6%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 67.0 6.76e-01 90.8% 90.0%
4315973 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.78 66.0 6.56e-01 89.9% 89.6%
5000468 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 71.0 7.02e-01 97.5% 96.0%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.78 67.0 6.74e-01 90.8% 90.0%
2492036 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 71.0 6.95e-01 98.3% 90.7%
3223650 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.78 71.0 6.64e-01 98.3% 92.4%
3719143 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 67.0 6.40e-01 91.6% 90.4%
3238130 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.78 71.0 6.61e-01 98.3% 89.7%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 67.0 6.29e-01 91.6% 90.7%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 68.0 6.68e-01 93.3% 94.4%
5074321 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 70.0 6.94e-01 99.2% 92.8%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 7.03e-01 99.2% 96.0%
4650306 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.77 65.0 6.55e-01 89.9% 90.0%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 70.0 6.80e-01 98.3% 96.2%
3939755 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 67.0 6.24e-01 94.1% 86.5%
3251868 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 66.0 6.22e-01 91.6% 90.7%
4047098 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.76 65.0 6.51e-01 89.9% 91.7%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 69.0 6.32e-01 98.3% 79.9%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 65.0 6.42e-01 90.8% 89.6%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 67.0 6.57e-01 93.3% 90.4%
1549269 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.76 65.0 6.46e-01 90.8% 88.4%
4508401 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 68.0 6.75e-01 97.5% 94.4%
3015241 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.76 64.0 6.47e-01 89.9% 89.9%
4234515 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.75 64.0 6.42e-01 89.9% 90.8%
2878151 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.75 64.0 6.37e-01 89.9% 88.4%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 63.0 6.25e-01 89.9% 93.6%
4251800 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.75 68.0 6.62e-01 98.3% 89.2%
3702817 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 64.0 6.19e-01 91.6% 91.8%
3406312 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.75 68.0 6.80e-01 98.3% 95.9%
4625643 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.75 63.0 6.35e-01 91.6% 89.9%
4480621 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.74 62.0 6.26e-01 89.9% 88.3%
2392830 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 68.0 6.63e-01 99.2% 90.1%
2987540 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.73 62.0 6.07e-01 91.6% 83.1%
2522057 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.72 62.0 6.18e-01 91.6% 88.6%
5978 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.72 63.0 6.28e-01 98.3% 91.9%
3388280 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.70 60.0 6.00e-01 98.3% 90.8%
3791518 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.63 54.0 5.39e-01 91.6% 93.3%
5078763 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 39.0 4.03e-01 88.2% 88.2%