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YP_008059170.1

Arc-Vir

NC_021327__YP_008059170.1__M200-gp100__00128

Identity

Accession:
NC_021327 ↗
Protein ID:
YP_008059170.1 ↗
Kingdom:
archaea

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Druskaviridae› Tredecimvirus› Halovirus_HCTV-5

TaxID: 1273748

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-130
PDB
Domain cluster: rep: IMGVR_UViG_3300005298_000040-3300005298-Ga0071330_107091546__D3-94
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h0hB02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 27.0 3.24e-01 72.3% 60.9%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 29.0 3.09e-01 88.1% 56.5%
3nftA00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.50 38.0 2.81e-01 80.2% 42.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039151 3103.1.1.0 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN 0.85 73.0 7.41e-01 91.1% 100.0%
5077628 3103.1.1.0 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN 0.80 59.0 6.37e-01 77.2% 100.0%
3947952 3103.1.1.3 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_15 0.54 47.0 4.75e-01 97.0% 99.0%
4142142 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 36.0 3.14e-01 78.2% 48.4%
4644476 304.139.1.0 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related 0.51 35.0 2.68e-01 73.3% 63.3%