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YP_008059506.1
Arc-VirNC_021329__YP_008059506.1__M196-gp17__00017
Identity
- Accession:
- NC_021329 ↗
- Protein ID:
- YP_008059506.1 ↗
- Kingdom:
- archaea
Quality
78.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kirjokansivirales›
Haloferuviridae›
Saldibavirus›
Halorubrum_tailed_virus_4
TaxID: 1273752
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-49
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.54 | 43.0 | 3.60e-01 | 100.0% | 67.6% |
| 3slkA01 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 44.0 | 3.11e-01 | 98.0% | 42.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3637049 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 48.0 | 3.09e-01 | 85.7% | 19.6% |
| 1038298 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.61 | 41.0 | 4.37e-01 | 87.8% | 81.4% |
| 3608344 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 40.0 | 3.06e-01 | 100.0% | 59.3% |