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YP_008059597.1

Arc-Vir

NC_021330__YP_008059597.1__M202-gp035__00035

Identity

Accession:
NC_021330 ↗
Protein ID:
YP_008059597.1 ↗
Kingdom:
archaea

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Thumleimavirales› Druskaviridae› Hacavirus› Haloarcula_californiae_tailed_virus_1

TaxID: 1273746

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-109
PDB
Domain cluster: rep: MZ334521__UBF22586.1__HRTV-25-gp5__00005__D4-85
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19118.6 best DUF5802 42.2 1.10e-10 100.0% 94.7%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cr5A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.79 56.0 6.46e-01 78.3% 100.0%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.77 58.0 6.49e-01 83.0% 100.0%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.75 56.0 6.37e-01 79.2% 100.0%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.75 58.0 6.07e-01 94.3% 89.6%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.73 61.0 6.24e-01 88.7% 100.0%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 55.0 6.12e-01 81.1% 100.0%
1cz4A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.72 59.0 6.33e-01 90.6% 100.0%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.68 59.0 5.95e-01 93.4% 100.0%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 53.0 4.61e-01 83.0% 84.5%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.68 57.0 5.79e-01 89.6% 100.0%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 53.0 5.31e-01 85.8% 83.0%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 52.0 5.08e-01 81.1% 100.0%
6cz7C02 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 47.0 4.38e-01 72.6% 100.0%
1dmrA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 55.0 4.79e-01 89.6% 84.7%
1ti2A04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 54.0 4.70e-01 85.8% 92.3%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.66 54.0 5.20e-01 86.8% 100.0%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.64 51.0 5.25e-01 83.0% 100.0%
2aefA03 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.64 36.0 4.12e-01 84.9% 74.7%
7sbiA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 38.0 4.46e-01 88.7% 94.3%
1jelP00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.57 36.0 3.96e-01 84.9% 78.8%
4ii2A06 3.10.290.60 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-activating enzyme E1, UFD domain 0.53 40.0 4.17e-01 82.1% 90.4%
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 38.0 3.88e-01 90.6% 81.4%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 34.0 3.61e-01 75.5% 78.9%
1lbvA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.51 35.0 3.44e-01 95.3% 65.8%
3pvlA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 39.0 4.07e-01 93.4% 93.8%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4963807 1.1.2.46 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DUF5802 0.89 83.0 8.42e-01 97.2% 100.0%
4027677 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 64.0 7.14e-01 79.2% 100.0%
4990349 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.81 59.0 6.75e-01 76.4% 100.0%
5048468 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.81 56.0 6.58e-01 81.1% 100.0%
3430527 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.81 59.0 6.76e-01 82.1% 100.0%
5083684 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.81 56.0 6.53e-01 77.4% 100.0%
5011232 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.80 58.0 6.64e-01 78.3% 100.0%
3824979 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 64.0 6.89e-01 91.5% 100.0%
5037727 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 60.0 6.70e-01 84.0% 100.0%
3744692 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 57.0 6.45e-01 95.3% 100.0%
4970875 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 60.0 6.64e-01 90.6% 100.0%
4945245 1.1.2.44 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.77 56.0 6.41e-01 81.1% 100.0%
4977163 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 61.0 6.67e-01 91.5% 100.0%
33 1.1.2.15 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PEX-2N 0.77 58.0 6.49e-01 83.0% 100.0%
3707799 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 59.0 6.52e-01 89.6% 100.0%
3784921 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.77 59.0 6.53e-01 86.8% 100.0%
3486347 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 62.0 6.50e-01 92.5% 94.7%
3514644 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.76 62.0 6.67e-01 86.8% 100.0%
3706161 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 58.0 6.45e-01 89.6% 100.0%
3492328 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 55.0 6.32e-01 77.4% 100.0%
3605376 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.76 61.0 6.40e-01 84.0% 100.0%
5045002 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 58.0 6.22e-01 83.0% 93.3%
3409396 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.76 59.0 5.99e-01 95.3% 82.9%
3599535 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 61.0 6.57e-01 85.8% 100.0%
3427279 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.75 63.0 5.20e-01 88.7% 63.9%
4097451 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.75 57.0 6.25e-01 78.3% 100.0%
3412364 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 54.0 5.58e-01 74.5% 100.0%
5073963 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 58.0 6.39e-01 86.8% 100.0%
5074983 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 60.0 6.49e-01 90.6% 100.0%
4241168 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 54.0 6.16e-01 76.4% 100.0%
4946804 1.1.2.44 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.74 57.0 6.32e-01 82.1% 100.0%
4171290 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.74 57.0 6.30e-01 84.9% 100.0%
5043151 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 54.0 6.15e-01 77.4% 100.0%
4027672 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.74 61.0 6.22e-01 87.7% 93.3%
5076554 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.74 54.0 6.11e-01 79.2% 100.0%
4607187 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 58.0 6.11e-01 91.5% 91.6%
4108919 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 56.0 6.21e-01 84.0% 100.0%
4977837 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 56.0 6.17e-01 83.0% 100.0%
5053174 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 58.0 6.22e-01 95.3% 97.8%
4890564 101.1.2.869 ↗ alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.73 54.0 6.03e-01 82.1% 100.0%
5053172 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 56.0 6.14e-01 88.7% 100.0%
3195760 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.73 57.0 6.16e-01 92.5% 97.8%
5060748 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 59.0 5.90e-01 86.8% 89.1%
5001485 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.72 55.0 6.12e-01 84.9% 100.0%
3273202 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 62.0 6.42e-01 91.5% 100.0%
1883479 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.72 58.0 6.20e-01 85.8% 100.0%
3611762 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.72 58.0 6.07e-01 86.8% 94.7%
4024752 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 57.0 5.91e-01 96.2% 90.0%
3557903 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.71 60.0 6.33e-01 95.3% 100.0%
3740728 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 54.0 5.99e-01 82.1% 100.0%
4446061 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 51.0 5.82e-01 81.1% 100.0%
4973225 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 52.0 4.81e-01 77.4% 94.1%
4592699 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 52.0 4.84e-01 76.4% 100.0%
3175987 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 62.0 4.89e-01 95.3% 84.8%
3352481 1.1.2.35 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF26429 0.70 59.0 5.33e-01 91.5% 98.6%
3977485 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 55.0 4.74e-01 83.0% 91.9%
4950319 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 59.0 5.48e-01 89.6% 88.4%
4978464 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 59.0 5.72e-01 89.6% 95.7%
3968980 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 59.0 4.76e-01 90.6% 79.0%
4979744 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 60.0 5.56e-01 92.5% 91.5%
3680293 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.69 60.0 6.09e-01 93.4% 100.0%
5008389 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 56.0 4.61e-01 86.8% 84.1%
5006288 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 58.0 5.87e-01 89.6% 95.2%
2968642 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 55.0 5.23e-01 84.0% 83.6%
5019509 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 59.0 5.54e-01 91.5% 92.8%
5013618 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 56.0 5.23e-01 86.8% 93.1%
4863286 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.68 52.0 5.70e-01 93.4% 100.0%
3684407 1.1.2.35 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF26429 0.68 61.0 5.20e-01 97.2% 100.0%
3963359 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 49.0 5.06e-01 74.5% 97.0%
4995426 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 57.0 5.69e-01 90.6% 93.6%
5077330 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 57.0 5.81e-01 89.6% 100.0%
3789369 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 57.0 5.89e-01 91.5% 100.0%
3406944 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 58.0 5.24e-01 91.5% 74.3%
3287818 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.67 56.0 4.90e-01 88.7% 88.4%
3748306 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 57.0 5.99e-01 91.5% 100.0%
5074694 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 56.0 5.09e-01 89.6% 95.7%
4014411 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 55.0 5.82e-01 88.7% 100.0%
4985654 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 54.0 4.92e-01 87.7% 100.0%
3179275 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.64 52.0 5.19e-01 87.7% 93.6%
3218726 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.64 56.0 5.81e-01 95.3% 100.0%
4963152 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.64 56.0 5.23e-01 95.3% 93.8%
4011480 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 52.0 5.23e-01 88.7% 96.2%
4936180 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.63 58.0 5.58e-01 100.0% 94.1%
2439653 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 53.0 4.73e-01 92.5% 97.9%
3206565 1.1.2.11 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RdRP 0.60 54.0 3.61e-01 100.0% 45.8%
3959718 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 46.0 4.55e-01 82.1% 95.7%
2095618 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 3.96e-01 91.5% 83.3%
3962625 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.52 30.0 3.19e-01 81.1% 63.3%
2491470 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 42.0 3.73e-01 91.5% 75.2%