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NC_021342.2__YP_008869218.1__X848_gp05__00005

Bact-Vir

Identity

Accession:: NC_021342 ↗
Kingdom:: phage

Quality

86.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yokohamavirus› Edwardsiella_phage_PEi21

TaxID: 1325372

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-120

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4b9wA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.69	35.0	4.73e-01	92.4%	100.0%
3ntkA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.66	34.0	4.05e-01	95.8%	72.5%
2egcA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.66	37.0	4.52e-01	93.2%	86.7%
2ekhA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.64	34.0	4.11e-01	72.0%	76.2%
2eczA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.62	35.0	4.45e-01	72.9%	92.9%
2q5fA02	2.60.200.30	Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2	0.50	37.0	3.60e-01	77.1%	96.3%

ECOD (24)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3463181	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.74	37.0	4.71e-01	97.5%	81.4%
3359784	4.1.1.42 ↗	beta barrels › SH3 › SH3 › SH3 › Agenet	0.72	38.0	4.97e-01	95.8%	93.8%
3931993	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.71	38.0	5.03e-01	96.6%	100.0%
3801791	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.70	38.0	4.94e-01	96.6%	95.4%
3671396	4.1.1.316 ↗	beta barrels › SH3 › SH3 › SH3 › PUB62-63_C	0.70	43.0	5.27e-01	83.1%	98.6%
3820064	4.1.1.3 ↗	beta barrels › SH3 › SH3 › SH3 › KOW	0.70	41.0	4.86e-01	87.3%	85.0%
3465976	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.69	38.0	4.93e-01	96.6%	98.5%
3498357	4.1.1.1 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_1	0.68	36.0	4.62e-01	92.4%	88.6%
3313119	4.1.1.42 ↗	beta barrels › SH3 › SH3 › SH3 › Agenet	0.67	38.0	4.55e-01	76.3%	82.5%
3234107	4.1.1.169 ↗	beta barrels › SH3 › SH3 › SH3 › DUF4819	0.67	39.0	4.89e-01	79.7%	97.1%
3277206	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.66	38.0	4.58e-01	79.7%	87.2%
3885050	4.1.1.360 ↗	beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2	0.64	43.0	3.78e-01	89.0%	46.9%
3469279	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	38.0	4.57e-01	80.5%	93.3%
4269256	4.1.1.245 ↗	beta barrels › SH3 › SH3 › SH3 › SspH	0.62	33.0	4.29e-01	71.2%	98.3%
3347851	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.62	36.0	4.67e-01	76.3%	100.0%
3416133	4.1.1.1 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_1	0.61	37.0	4.59e-01	76.3%	97.3%
3925069	4.1.1.319 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9	0.59	43.0	4.10e-01	77.1%	90.0%
3333322	4.1.1.42 ↗	beta barrels › SH3 › SH3 › SH3 › Agenet	0.58	46.0	4.43e-01	83.9%	100.0%
3555931	4.1.1.322 ↗	beta barrels › SH3 › SH3 › SH3 › GPKOW_C	0.58	42.0	4.30e-01	78.8%	76.5%
3482225	4.1.1.300 ↗	beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C	0.57	42.0	4.07e-01	79.7%	68.5%
3819340	4.1.1.322 ↗	beta barrels › SH3 › SH3 › SH3 › GPKOW_C	0.57	41.0	4.13e-01	78.0%	73.3%
3296833	4.1.1.300 ↗	beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C	0.56	41.0	3.91e-01	79.7%	65.2%
4002679	4.1.1.322 ↗	beta barrels › SH3 › SH3 › SH3 › GPKOW_C	0.54	41.0	4.08e-01	78.0%	80.8%
3243256	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	46.0	4.08e-01	97.5%	76.0%

D2 medium residues 124-176

PDB

Domain cluster: rep: AB767244.1__BAM68826.1__X__00005__D49-99