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NC_021342.2__YP_008869284.1__X848_gp71__00071

Bact-Vir

Identity

Accession:: NC_021342 ↗
Kingdom:: phage

Quality

77.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yokohamavirus› Edwardsiella_phage_PEi21

TaxID: 1325372

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 167-204

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2c7yA00	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.54	43.0	2.53e-01	94.7%	82.6%
1mc0A01	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.54	42.0	2.93e-01	94.7%	64.6%
1p97A00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.53	37.0	2.84e-01	81.6%	43.9%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3273162	282.1.1.1 ↗	a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS	0.61	42.0	2.88e-01	73.7%	44.0%
4054703	7581.1.1.22 ↗	a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt	0.59	49.0	2.75e-01	100.0%	49.8%
3254508	282.1.1.1 ↗	a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS	0.55	41.0	2.88e-01	78.9%	63.6%
2037203	223.3.1.3 ↗	a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase	0.53	38.0	3.59e-01	81.6%	66.7%
3271282	282.1.1.1 ↗	a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS	0.53	38.0	2.57e-01	81.6%	21.3%
5076347	101.1.8.0 ↗	alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes	0.53	37.0	3.07e-01	81.6%	37.6%
2774038	223.3.1.3 ↗	a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase	0.53	37.0	3.17e-01	76.3%	85.3%
4943780	282.1.1.1 ↗	a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS	0.52	36.0	2.56e-01	76.3%	28.1%
4032134	282.1.1.1 ↗	a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS	0.51	36.0	2.39e-01	73.7%	29.4%
5040121	282.1.1.1 ↗	a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS	0.51	37.0	2.58e-01	81.6%	22.9%
3741502	221.7.1.3 ↗	a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 › UAE_UbL	0.51	36.0	2.95e-01	100.0%	66.4%

D2 medium residues 1-80

PDB

D3 medium residues 81-163

PDB

Domain cluster: representative