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NC_021532.1__YP_008126022.1__M610_gp051__00051

Bact-Vir

Identity

Accession:: NC_021532 ↗
Kingdom:: phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_vB_AmaP_AD45-P1

TaxID: 1300004

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 306-434

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF09967.16 best	DUF2201	42.9	6.90e-11	94.6%	86.2%

CATH (68)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1shuX00	3.40.50.410	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain	0.83	79.0	6.91e-01	100.0%	85.1%
2hqbA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.79	57.0	5.72e-01	100.0%	73.3%
4ycsA00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.79	60.0	6.18e-01	100.0%	82.9%
2qsjB00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.74	53.0	5.42e-01	100.0%	77.0%
3i09A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.72	61.0	5.19e-01	100.0%	56.6%
3g85A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.72	53.0	5.10e-01	100.0%	67.8%
3h75A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.71	54.0	4.74e-01	100.0%	54.5%
3k3pA01	3.40.50.20	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.71	56.0	6.00e-01	82.9%	97.3%
2hqoA00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.71	50.0	5.25e-01	100.0%	79.8%
1r8jB01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.70	50.0	4.79e-01	100.0%	63.8%
3h5iA00	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.69	51.0	5.24e-01	100.0%	79.2%
3e5nA01	3.40.50.20	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.68	53.0	5.44e-01	82.9%	96.8%
5kc8A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.67	59.0	4.72e-01	100.0%	50.4%
3hbmA01	3.40.50.11190	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.67	54.0	5.34e-01	100.0%	80.6%
1nbaB00	3.40.50.850	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like	0.66	61.0	4.84e-01	100.0%	71.0%
3eefA00	3.40.50.850	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like	0.66	60.0	5.48e-01	100.0%	95.9%
3qi7A01	3.40.50.11400	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.65	55.0	5.32e-01	100.0%	81.4%
1xeaA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.64	54.0	5.61e-01	100.0%	97.5%
3abiA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.63	53.0	4.81e-01	100.0%	67.4%
6norA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.63	53.0	5.15e-01	100.0%	80.8%
4nesA01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.63	57.0	4.96e-01	100.0%	72.7%
2pvpA01	3.40.50.20	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.62	52.0	5.44e-01	98.4%	97.5%
6o15A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.62	52.0	5.42e-01	100.0%	97.5%
1sqsA00	3.40.50.360	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain	0.62	57.0	4.66e-01	100.0%	64.9%
1zh8A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.62	53.0	5.17e-01	100.0%	83.9%
4dvjA02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.62	52.0	5.00e-01	100.0%	80.1%
3e82B01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.62	52.0	5.02e-01	100.0%	80.1%
3c1aA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.61	52.0	4.78e-01	100.0%	71.6%
4koaA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.61	52.0	5.38e-01	100.0%	97.5%
3uhjC01	3.40.50.1970	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.61	51.0	4.84e-01	100.0%	75.7%
2p2sA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.61	52.0	5.11e-01	100.0%	86.1%
3fbgA02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.61	52.0	4.97e-01	100.0%	79.6%
3o9zA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.61	55.0	5.51e-01	100.0%	96.9%
1ig3A02	3.40.50.10240	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain	0.61	50.0	4.77e-01	86.0%	95.2%
3ceaA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.61	53.0	5.06e-01	100.0%	81.2%
3ec7A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.60	53.0	4.44e-01	100.0%	57.3%
6ejiA02	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.60	52.0	4.76e-01	100.0%	72.2%
3c48B02	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.60	52.0	4.68e-01	100.0%	68.3%
3dtyA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.60	54.0	4.81e-01	100.0%	71.3%
2bfwA01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.59	53.0	4.67e-01	100.0%	66.7%
1evjA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.59	52.0	4.92e-01	100.0%	78.5%
6pfzD02	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.59	43.0	3.42e-01	95.3%	37.4%
1y8aA01	3.40.50.1000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like	0.59	53.0	4.91e-01	100.0%	76.6%
1e3jA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.59	51.0	5.05e-01	100.0%	89.9%
4v1xA02	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.59	50.0	3.66e-01	92.2%	68.3%
6mh4A01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.59	53.0	5.17e-01	100.0%	98.6%
1gcuA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.59	51.0	4.98e-01	100.0%	85.4%
2ixaA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.58	53.0	4.84e-01	100.0%	88.8%
5i45A00	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.58	53.0	4.60e-01	100.0%	67.2%
2p11A01	3.40.50.1000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like	0.58	52.0	5.02e-01	100.0%	87.6%
2i9uA02	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.57	51.0	3.86e-01	98.4%	86.0%
4hlnA02	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.57	52.0	4.39e-01	100.0%	62.1%
2cf5A02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.56	47.0	4.42e-01	100.0%	74.5%
5t5dA00	3.40.35.10	Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component	0.56	49.0	4.66e-01	96.9%	99.3%
5visB00	3.20.20.20	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like	0.55	48.0	3.81e-01	95.3%	74.9%
1xr4B01	3.40.1080.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase	0.55	49.0	4.06e-01	100.0%	69.9%
1ad1A00	3.20.20.20	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like	0.55	47.0	3.79e-01	95.3%	72.0%
1dxyA02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.53	48.0	4.19e-01	100.0%	77.6%
2wqpA01	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.53	49.0	3.81e-01	100.0%	63.8%
5khaB01	3.60.110.10	Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase	0.53	47.0	3.78e-01	98.4%	75.0%
3cyjA02	3.20.20.120	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain	0.53	44.0	3.59e-01	89.1%	76.4%
1fhvA01	3.20.20.120	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain	0.53	42.0	3.72e-01	86.8%	64.6%
2q09A02	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.52	46.0	3.57e-01	98.4%	71.9%
3lnpA02	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.52	45.0	3.55e-01	97.7%	97.3%
1vr6A02	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.52	46.0	3.69e-01	100.0%	80.2%
2hy5B00	3.40.1260.10	Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like	0.52	42.0	4.23e-01	100.0%	84.8%
1telA02	3.20.20.110	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain	0.51	45.0	3.57e-01	100.0%	82.7%
2cb0A01	3.40.50.10490	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1	0.50	42.0	3.99e-01	93.0%	75.9%

ECOD (80)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4264308	2006.1.6.24 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201	0.87	82.0	7.40e-01	100.0%	77.0%
4991152	2006.1.6.24 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201	0.86	82.0	7.70e-01	100.0%	88.0%
4943635	2006.1.6.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like	0.85	80.0	6.75e-01	100.0%	86.8%
3958774	2006.1.6.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like	0.83	77.0	5.90e-01	100.0%	69.4%
5011082	2006.1.6.13 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3	0.82	77.0	6.50e-01	100.0%	72.2%
5041717	2006.1.6.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like	0.76	71.0	6.33e-01	100.0%	77.7%
2774025	2007.1.2.5 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp	0.75	57.0	6.18e-01	100.0%	94.4%
3599558	2007.1.3.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like	0.73	50.0	5.08e-01	100.0%	70.0%
1630482	2007.1.2.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I	0.72	55.0	5.68e-01	100.0%	83.1%
5001177	2007.1.11.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains	0.70	57.0	5.60e-01	100.0%	82.2%
4183675	7512.1.1.0 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase	0.69	52.0	5.34e-01	100.0%	81.6%
4970071	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.68	62.0	5.26e-01	100.0%	75.7%
4257123	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.68	62.0	5.28e-01	100.0%	82.0%
5014056	2007.1.11.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains	0.67	56.0	5.46e-01	100.0%	82.1%
4960578	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.67	61.0	5.19e-01	100.0%	79.0%
4953328	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.67	61.0	5.41e-01	100.0%	78.4%
4975086	7512.1.1.0 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase	0.67	61.0	5.43e-01	100.0%	85.6%
4996695	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.67	61.0	5.39e-01	100.0%	84.9%
5000511	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.66	61.0	5.62e-01	100.0%	81.1%
5016064	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.66	61.0	5.18e-01	100.0%	83.4%
4998416	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.66	60.0	5.25e-01	100.0%	75.3%
4997246	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.66	60.0	5.53e-01	100.0%	89.7%
5079149	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.66	60.0	3.95e-01	100.0%	34.8%
4947852	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.66	60.0	5.66e-01	100.0%	86.3%
3811360	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.66	60.0	5.40e-01	100.0%	85.1%
5049985	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.66	60.0	5.69e-01	100.0%	93.3%
4203358	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.66	60.0	5.12e-01	100.0%	72.2%
5047066	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.65	59.0	5.68e-01	100.0%	90.7%
4974786	7512.1.1.3 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1	0.65	54.0	5.03e-01	100.0%	71.2%
5041724	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.65	59.0	5.46e-01	100.0%	85.5%
5030178	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.65	59.0	5.33e-01	100.0%	91.4%
5056289	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.65	59.0	5.21e-01	100.0%	93.2%
4981654	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.65	59.0	5.01e-01	100.0%	80.0%
5000538	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.65	59.0	5.87e-01	100.0%	97.0%
5017122	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.64	59.0	5.16e-01	100.0%	87.4%
3435930	2006.1.4.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like	0.64	58.0	5.37e-01	100.0%	78.8%
5044499	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	59.0	5.19e-01	100.0%	93.5%
3838822	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	59.0	4.90e-01	100.0%	96.4%
3386783	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	59.0	5.69e-01	100.0%	91.7%
5014193	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	58.0	5.37e-01	100.0%	78.8%
4015709	2006.1.4.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like	0.64	59.0	5.61e-01	100.0%	88.7%
3702876	2007.1.3.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like	0.64	50.0	5.07e-01	100.0%	82.3%
5081473	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.64	58.0	5.27e-01	100.0%	85.1%
4946825	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.64	59.0	4.93e-01	100.0%	76.6%
5035356	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	58.0	5.02e-01	100.0%	91.5%
4968562	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	58.0	5.38e-01	100.0%	80.6%
3331148	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	59.0	5.22e-01	100.0%	74.4%
3969580	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.64	59.0	4.95e-01	100.0%	71.9%
5048460	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	57.0	5.63e-01	100.0%	95.7%
3462864	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.64	58.0	5.09e-01	100.0%	74.2%
3972484	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.64	58.0	5.14e-01	100.0%	79.5%
4988724	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.64	57.0	5.15e-01	100.0%	71.8%
4980524	2006.1.4.3 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN	0.63	57.0	5.18e-01	100.0%	90.9%
4942035	7512.1.1.31 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4	0.63	57.0	5.17e-01	100.0%	73.7%
5082463	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.63	57.0	4.74e-01	100.0%	70.2%
3586967	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.62	57.0	4.79e-01	100.0%	70.2%
4942365	7512.1.1.0 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase	0.62	53.0	4.85e-01	100.0%	70.9%
4988207	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.62	56.0	5.19e-01	100.0%	84.2%
4497401	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.62	56.0	5.05e-01	100.0%	87.8%
5031049	2003.1.1.386 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_C	0.62	55.0	3.87e-01	100.0%	31.8%
5079827	7512.1.1.3 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1	0.62	51.0	4.51e-01	100.0%	61.6%
4930425	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.61	56.0	5.09e-01	100.0%	87.6%
4963596	7512.1.1.3 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1	0.61	53.0	4.76e-01	100.0%	67.0%
2157035	7512.1.1.3 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1	0.61	53.0	4.68e-01	100.0%	65.9%
5051599	7512.1.1.3 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1	0.61	54.0	4.87e-01	100.0%	71.4%
5057225	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.61	55.0	5.02e-01	100.0%	87.6%
4964606	7512.1.1.30 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4	0.60	54.0	4.92e-01	100.0%	85.1%
4975067	7512.1.1.32 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4	0.60	54.0	4.70e-01	100.0%	66.3%
4338436	2003.1.4.10 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2	0.60	47.0	4.38e-01	100.0%	66.1%
4988208	7512.1.1.3 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1	0.60	53.0	4.54e-01	100.0%	60.5%
5031137	7512.1.1.32 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4	0.59	53.0	4.52e-01	100.0%	72.6%
3199169	2002.1.1.36 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind	0.59	44.0	3.31e-01	78.3%	41.2%
4152740	2003.1.4.10 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2	0.58	47.0	4.34e-01	100.0%	67.3%
3285772	7579.1.1.0 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases	0.57	52.0	4.22e-01	100.0%	61.6%
4227398	2003.1.4.10 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2	0.57	47.0	4.27e-01	100.0%	63.9%
4441136	2003.1.4.10 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2	0.57	47.0	4.18e-01	100.0%	60.5%
4197315	2003.1.4.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain	0.56	45.0	4.20e-01	100.0%	68.5%
4602436	2003.1.4.10 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2	0.56	46.0	4.20e-01	100.0%	67.1%
4497067	328.3.1.2 ↗	a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3	0.53	33.0	3.83e-01	96.9%	88.9%
4933365	2002.1.1.120 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM	0.53	48.0	3.56e-01	100.0%	45.4%

D2 medium residues 1-88_203-246

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4jixB00	3.30.2010.10	Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain"	0.65	41.0	4.58e-01	94.7%	80.8%
3e11A00	3.30.2010.20	Alpha Beta › 2-Layer Sandwich › Zincin-like ›	0.59	46.0	4.98e-01	100.0%	95.6%
2braA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.58	41.0	2.82e-01	73.5%	82.7%
6ks6G02	3.30.260.10	Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain	0.57	31.0	3.51e-01	89.4%	67.3%
6jebA01	3.30.379.10	Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like	0.54	28.0	3.55e-01	90.9%	86.7%
1lkvX02	1.10.220.30	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain	0.54	34.0	3.45e-01	81.1%	63.6%
2nq2A00	1.10.3470.10	Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC	0.52	42.0	3.28e-01	88.6%	78.2%
3rcnA01	3.30.379.10	Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like	0.50	34.0	3.48e-01	97.7%	69.5%
3dwbA01	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.50	45.0	3.44e-01	100.0%	43.8%

ECOD (23)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3754954	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.75	44.0	3.62e-01	80.3%	33.9%
4930641	2498.1.1.58 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N	0.72	67.0	6.04e-01	97.7%	93.5%
4937460	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.70	49.0	5.45e-01	99.2%	90.5%
5041958	2498.1.1.58 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N	0.69	64.0	5.49e-01	98.5%	96.0%
3390790	2498.5.1.0 ↗	mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like	0.66	32.0	3.84e-01	88.6%	67.8%
3959412	2498.1.1.10 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48	0.66	42.0	4.30e-01	84.1%	66.4%
4989134	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.66	47.0	5.05e-01	97.0%	85.2%
5016438	2498.1.1.17 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like	0.65	44.0	4.17e-01	100.0%	58.1%
1030677	2498.1.1.17 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like	0.65	41.0	4.47e-01	94.7%	75.0%
1314423	2498.1.1.26 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56	0.63	42.0	4.65e-01	97.0%	82.6%
3610180	2498.5.1.0 ↗	mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like	0.63	31.0	3.71e-01	86.4%	68.9%
4223692	2498.1.1.58 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N	0.61	57.0	5.19e-01	97.7%	96.5%
4942840	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.59	43.0	4.82e-01	98.5%	95.2%
3185057	2498.1.1.5 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N	0.57	43.0	2.74e-01	81.1%	46.4%
3502567	2498.1.1.5 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N	0.56	43.0	2.74e-01	81.1%	51.4%
3970171	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.56	39.0	4.38e-01	92.4%	90.5%
3644314	2498.1.1.39 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like	0.54	43.0	4.28e-01	92.4%	80.7%
5075577	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.52	43.0	4.17e-01	97.7%	79.3%
3868678	2498.1.1.65 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MATCAP	0.51	47.0	3.43e-01	97.0%	68.5%
3242080	2498.1.1.5 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N	0.51	40.0	2.57e-01	83.3%	49.8%
5030912	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.51	42.0	3.27e-01	95.5%	41.4%
3586986	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.50	37.0	3.71e-01	78.0%	74.1%
4537352	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.50	36.0	3.39e-01	78.8%	61.3%

D3 medium residues 89-153

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3558030	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.56	40.0	2.69e-01	80.0%	31.2%