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NC_021532.1__YP_008126038.1__M610_gp114__00067
Bact-VirNC_021532.1__YP_008126038.1__M610_gp114__00067
Identity
- Accession:
- NC_021532 ↗
- Kingdom:
- phage
Quality
77.8
mean pLDDT
Taxonomy
TaxID: 1300004
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-112
Domain cluster:
rep: MT161459.1__QIW87046.1__AHP1_2151__00215__D2-83
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 26.0 | 3.26e-01 | 76.9% | 61.9% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 29.0 | 3.34e-01 | 71.3% | 72.0% |
| 3b34A04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.52 | 28.0 | 2.88e-01 | 81.5% | 52.0% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.51 | 28.0 | 3.63e-01 | 76.9% | 100.0% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.93e-01 | 78.7% | 100.0% |
| 6i8wB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 38.0 | 2.86e-01 | 82.4% | 58.0% |
| 3kalB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.50 | 23.0 | 2.87e-01 | 81.5% | 71.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4817370 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.56 | 36.0 | 3.15e-01 | 74.1% | 43.1% |
| 3274487 | 605.1.1.155 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 | 0.56 | 40.0 | 3.45e-01 | 75.9% | 74.9% |
| 4012962 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 3.43e-01 | 84.3% | 64.0% |
| 3208120 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.55 | 40.0 | 3.51e-01 | 75.0% | 95.5% |
| 3211790 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.54 | 27.0 | 3.11e-01 | 75.9% | 64.0% |
| 3805761 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.53 | 33.0 | 3.74e-01 | 87.0% | 89.3% |
| 4022379 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.52 | 38.0 | 3.41e-01 | 76.9% | 70.7% |
| 5044181 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.51 | 35.0 | 4.10e-01 | 77.8% | 100.0% |
| 4980798 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.51 | 33.0 | 3.87e-01 | 81.5% | 94.7% |
| 5058130 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.51 | 32.0 | 3.81e-01 | 82.4% | 92.0% |
| 3193704 | 109.3.1.152 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › NACHT_N | 0.51 | 45.0 | 3.39e-01 | 100.0% | 59.3% |
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.50 | 32.0 | 3.82e-01 | 76.9% | 100.0% |