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NC_021532.1__YP_008126043.1__M610_gp109__00072

Bact-Vir

NC_021532.1__YP_008126043.1__M610_gp109__00072

Identity

Accession:
NC_021532 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_vB_AmaP_AD45-P1

TaxID: 1300004

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-51
PDB
Domain cluster: rep: MN592896.1__QGZ13134.1__X__00038__D105-144
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 69.0 5.73e-01 100.0% 73.3%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 68.0 5.86e-01 100.0% 66.2%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 69.0 6.02e-01 100.0% 69.8%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 6.28e-01 100.0% 94.4%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 66.0 5.93e-01 100.0% 88.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 66.0 6.38e-01 100.0% 87.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.66e-01 100.0% 60.9%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 5.58e-01 100.0% 66.2%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 63.0 5.73e-01 97.6% 76.3%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 5.57e-01 100.0% 88.1%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 64.0 5.70e-01 100.0% 80.6%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 59.0 5.28e-01 87.8% 96.6%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 5.43e-01 100.0% 70.0%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.06e-01 100.0% 66.3%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 60.0 4.90e-01 100.0% 64.0%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.73 58.0 5.46e-01 92.7% 90.4%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 60.0 5.01e-01 100.0% 69.2%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 60.0 5.27e-01 100.0% 95.5%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 59.0 5.20e-01 92.7% 93.4%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 58.0 4.99e-01 92.7% 91.0%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.71 56.0 5.19e-01 92.7% 83.9%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.71 56.0 5.06e-01 92.7% 89.8%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.16e-01 100.0% 89.1%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.70 55.0 4.91e-01 92.7% 75.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.37e-01 100.0% 81.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 56.0 5.14e-01 100.0% 91.7%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.61e-01 100.0% 87.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.69 57.0 5.01e-01 100.0% 72.7%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 53.0 4.19e-01 92.7% 63.5%
4itjB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 52.0 4.18e-01 87.8% 90.9%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.32e-01 100.0% 80.0%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 52.0 4.45e-01 90.2% 86.5%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 52.0 4.39e-01 90.2% 95.9%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 4.94e-01 100.0% 81.8%
1awjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 52.0 4.44e-01 100.0% 71.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.42e-01 100.0% 66.2%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.64 53.0 3.86e-01 100.0% 36.3%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.67e-01 100.0% 81.8%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 46.0 3.15e-01 82.9% 64.2%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 48.0 4.11e-01 90.2% 57.5%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 50.0 4.38e-01 92.7% 95.4%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.05e-01 95.1% 62.7%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 45.0 4.22e-01 90.2% 100.0%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.60 43.0 4.15e-01 87.8% 64.2%
3dmeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 45.0 3.05e-01 97.6% 67.1%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 46.0 4.05e-01 95.1% 67.6%
4nh0A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 2.87e-01 90.2% 92.1%
2e5vA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 2.87e-01 97.6% 67.7%
3ei3B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 46.0 2.84e-01 100.0% 89.9%
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.57 38.0 3.87e-01 75.6% 70.7%
5towB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 2.86e-01 92.7% 21.3%
2i9xA00 3.30.1120.40 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Stage V sporulation protein G 0.57 42.0 3.51e-01 87.8% 90.7%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 45.0 3.41e-01 100.0% 90.1%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 43.0 2.59e-01 92.7% 17.9%
6rjiA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 4.02e-01 90.2% 100.0%
1cjxA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 40.0 2.86e-01 82.9% 24.0%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 45.0 2.96e-01 100.0% 48.0%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 2.61e-01 97.6% 39.5%
1avgI00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 41.0 3.01e-01 90.2% 62.0%
1onfA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 3.36e-01 100.0% 75.4%
3f8dB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 3.03e-01 100.0% 54.1%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.55 44.0 3.02e-01 92.7% 57.7%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 41.0 3.69e-01 95.1% 71.8%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 3.07e-01 97.6% 46.5%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.55 41.0 2.95e-01 90.2% 53.9%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.54 41.0 3.48e-01 97.6% 77.5%
3dsoA00 2.40.10.300 Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K 0.54 39.0 3.50e-01 100.0% 51.5%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 43.0 3.32e-01 100.0% 75.4%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.53 41.0 2.75e-01 95.1% 32.9%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 3.17e-01 100.0% 73.7%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.53 40.0 3.84e-01 90.2% 72.5%
4o65A00 2.60.120.570 Mainly Beta › Sandwich › Jelly Rolls › Particulate methane monooxygenase, b subunit. Chain: A, domain 1 0.52 41.0 2.97e-01 100.0% 85.0%
2aj4B01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 39.0 2.51e-01 82.9% 91.1%
1aorA02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.52 43.0 2.84e-01 97.6% 30.6%
4z3xA03 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.52 42.0 2.83e-01 100.0% 26.9%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 38.0 3.64e-01 90.2% 70.6%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3741680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 76.0 6.87e-01 100.0% 85.5%
3609527 2006.1.1.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.84 73.0 4.56e-01 97.6% 20.5%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 74.0 6.54e-01 100.0% 81.7%
4024913 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 72.0 6.19e-01 100.0% 61.5%
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 70.0 6.36e-01 100.0% 70.9%
3502418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 62.0 6.63e-01 87.8% 97.1%
3785385 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 73.0 5.60e-01 100.0% 45.6%
4014906 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 69.0 5.52e-01 95.1% 51.2%
3247995 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 71.0 5.98e-01 100.0% 64.3%
3523979 604.12.1.118 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 0.81 72.0 6.31e-01 100.0% 73.3%
4003181 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.81 70.0 6.23e-01 100.0% 95.0%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.80 70.0 6.57e-01 97.6% 84.0%
1755798 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.80 65.0 5.62e-01 90.2% 88.9%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.80 69.0 4.36e-01 100.0% 20.5%
3621642 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.80 68.0 5.53e-01 100.0% 66.3%
3451280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 4.62e-01 100.0% 29.0%
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.79 70.0 6.55e-01 100.0% 84.0%
3396594 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 70.0 6.18e-01 100.0% 83.3%
3475240 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.79 67.0 6.16e-01 97.6% 85.5%
598 4.1.1.68 ↗ beta barrels › SH3 › SH3 › SH3 › YorP 0.79 68.0 5.73e-01 100.0% 71.8%
3478898 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 68.0 5.89e-01 100.0% 70.8%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 68.0 5.73e-01 100.0% 81.4%
3930456 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 68.0 5.90e-01 100.0% 75.4%
3600486 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 67.0 5.09e-01 100.0% 53.0%
3939132 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.06e-01 100.0% 56.0%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.93e-01 100.0% 88.3%
3496355 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 66.0 6.09e-01 100.0% 96.4%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.15e-01 100.0% 85.5%
3498145 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 66.0 5.75e-01 100.0% 82.8%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 65.0 5.92e-01 95.1% 85.5%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 65.0 5.34e-01 100.0% 67.1%
4889436 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.77 61.0 5.30e-01 87.8% 90.3%
3834390 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 64.0 6.09e-01 97.6% 90.0%
3563220 4.1.1.220 ↗ beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.76 66.0 5.32e-01 100.0% 63.7%
3873942 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.59e-01 100.0% 86.2%
3776390 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.76 63.0 4.69e-01 100.0% 47.0%
3390253 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.33e-01 100.0% 73.3%
3480491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 5.34e-01 100.0% 72.0%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.42e-01 100.0% 75.7%
3482676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.67e-01 100.0% 91.7%
3514453 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 64.0 5.34e-01 100.0% 70.7%
3918340 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 63.0 5.39e-01 100.0% 78.6%
3841524 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 62.0 4.69e-01 100.0% 49.1%
3573620 4.1.1.318 ↗ beta barrels › SH3 › SH3 › SH3 › PF26085 0.75 62.0 5.51e-01 95.1% 86.7%
3211367 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 63.0 4.96e-01 100.0% 61.1%
3900733 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 63.0 5.39e-01 100.0% 77.1%
3995431 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 61.0 5.18e-01 100.0% 82.7%
3924338 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 63.0 5.37e-01 100.0% 77.1%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.74 62.0 4.17e-01 100.0% 32.1%
3579728 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 62.0 5.31e-01 100.0% 78.6%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 62.0 5.32e-01 100.0% 75.7%
3517131 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 60.0 6.08e-01 95.1% 100.0%
3899589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 5.49e-01 100.0% 91.7%
5026951 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.73 60.0 4.24e-01 92.7% 90.4%
3554995 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 61.0 5.25e-01 100.0% 75.7%
3224981 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 60.0 5.43e-01 100.0% 88.3%
4537356 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.73 60.0 5.41e-01 97.6% 98.3%
3703907 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 56.0 4.93e-01 90.2% 100.0%
157818 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 59.0 4.72e-01 100.0% 60.4%
3575571 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 57.0 4.57e-01 92.7% 87.1%
5049906 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 57.0 5.12e-01 92.7% 65.0%
3613173 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 54.0 4.10e-01 90.2% 61.9%
4028871 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 55.0 4.65e-01 92.7% 84.9%
3496961 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 4.48e-01 87.8% 60.0%
3489317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 5.00e-01 87.8% 86.7%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.66 53.0 4.57e-01 100.0% 61.3%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 53.0 4.62e-01 100.0% 65.7%
3591236 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 49.0 2.72e-01 87.8% 7.9%
4950307 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 50.0 4.20e-01 92.7% 86.3%
3230584 2.1.1.318 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7037 0.64 48.0 4.61e-01 85.4% 82.0%
3626269 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 49.0 3.61e-01 90.2% 56.7%
3441677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.12e-01 100.0% 94.0%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 4.88e-01 100.0% 86.0%
4206425 2.1.1.48 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.63 49.0 4.44e-01 90.2% 66.1%
4113537 2.1.1.327 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27401 0.62 48.0 4.28e-01 90.2% 96.9%
4940157 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.62 50.0 4.70e-01 100.0% 87.3%
3417366 312.1.1.19 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 0.62 45.0 3.23e-01 82.9% 47.9%
224080 2.14.1.2 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › CHS5_N 0.61 46.0 3.94e-01 90.2% 55.3%
3576592 2.1.1.246 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29071 0.59 46.0 3.86e-01 90.2% 74.7%
4504019 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 45.0 4.09e-01 90.2% 88.3%
3210653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 3.80e-01 85.4% 70.8%
3645592 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.58 46.0 3.63e-01 97.6% 90.0%
3701382 312.1.1.8 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.57 47.0 2.95e-01 100.0% 93.0%
4016568 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.56 44.0 2.58e-01 97.6% 42.5%
4440203 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.55 42.0 3.81e-01 87.8% 86.7%
3728847 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.55 43.0 2.56e-01 100.0% 35.5%
3624661 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.55 43.0 3.07e-01 100.0% 87.3%
4045485 3943.1.1.1 ↗ beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains 0.54 43.0 3.61e-01 100.0% 64.7%
4026595 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.53 40.0 3.43e-01 97.6% 86.4%
4886914 4998.1.1.1 ↗ beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.53 37.0 2.60e-01 75.6% 20.3%
3425319 2.1.1.87 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB 0.52 38.0 3.02e-01 90.2% 61.8%
3669346 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.51 35.0 3.12e-01 80.5% 48.1%
D2 medium residues 58-91
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 57.0 5.11e-01 94.1% 89.6%
3onqA01 1.20.5.5100 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 57.0 5.36e-01 91.2% 73.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941013 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.78 64.0 3.78e-01 100.0% 12.3%
3894036 207.1.1.55 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.78 62.0 3.57e-01 100.0% 9.7%
3373946 192.19.1.0 ↗ alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like 0.73 56.0 5.67e-01 94.1% 97.1%