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NC_021790.1__YP_008240944.1__Phi18-1_gp30__00030

Bact-Vir

NC_021790.1__YP_008240944.1__Phi18-1_gp30__00030

Identity

Accession:
NC_021790 ↗
Kingdom:
phage

Quality

71.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Helsingorvirus› Cellulophaga_phage_phi18:1

TaxID: 1327982

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-78
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 75.0 6.59e-01 100.0% 92.2%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 75.0 6.11e-01 100.0% 67.5%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 76.0 6.55e-01 100.0% 89.4%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 76.0 5.98e-01 100.0% 56.5%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 73.0 6.49e-01 100.0% 88.9%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 74.0 6.14e-01 100.0% 76.0%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 74.0 5.85e-01 100.0% 57.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 75.0 6.59e-01 100.0% 90.3%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 73.0 6.82e-01 100.0% 98.2%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 72.0 6.26e-01 100.0% 79.4%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 74.0 6.76e-01 100.0% 94.7%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 73.0 6.41e-01 100.0% 76.6%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 72.0 6.46e-01 100.0% 93.4%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 73.0 6.98e-01 100.0% 94.1%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 72.0 5.79e-01 100.0% 64.3%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 71.0 6.71e-01 100.0% 94.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 71.0 6.43e-01 100.0% 94.9%
2kymA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 71.0 5.50e-01 100.0% 61.3%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 70.0 6.40e-01 100.0% 96.6%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 69.0 6.33e-01 100.0% 98.3%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 58.0 5.16e-01 79.5% 59.7%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 69.0 6.06e-01 100.0% 83.1%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 68.0 5.73e-01 100.0% 71.1%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 69.0 6.18e-01 100.0% 93.4%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 5.66e-01 100.0% 64.9%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 68.0 6.18e-01 100.0% 91.5%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 6.16e-01 100.0% 80.0%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 67.0 5.88e-01 100.0% 91.2%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 69.0 5.96e-01 100.0% 91.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 67.0 6.06e-01 100.0% 90.0%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 5.62e-01 100.0% 81.1%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.76 54.0 5.53e-01 100.0% 85.0%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 62.0 5.76e-01 93.2% 100.0%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 63.0 5.84e-01 100.0% 91.7%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 6.02e-01 100.0% 78.6%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 63.0 5.16e-01 100.0% 66.3%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.75e-01 100.0% 73.0%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.52e-01 100.0% 72.9%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 5.32e-01 97.7% 80.0%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 6.04e-01 100.0% 98.0%
1yvuA02 2.30.340.10 Mainly Beta › Roll › PAZ domain fold › PAZ domain superfamily 0.71 63.0 4.93e-01 100.0% 80.6%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 4.69e-01 100.0% 44.2%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.74e-01 100.0% 92.5%
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.69 58.0 4.02e-01 100.0% 34.1%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.47e-01 100.0% 83.9%
2k3aA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.68 58.0 4.54e-01 100.0% 54.0%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.68 56.0 4.48e-01 100.0% 49.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 4.69e-01 100.0% 56.2%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 47.0 3.57e-01 100.0% 70.2%
4eqsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 44.0 3.31e-01 100.0% 81.1%
3aljA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 3.00e-01 100.0% 37.8%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.55 42.0 3.18e-01 100.0% 58.2%
4uoyA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 42.0 2.80e-01 90.9% 54.5%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 38.0 2.56e-01 88.6% 38.7%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.86 79.0 6.46e-01 100.0% 81.3%
3399284 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.86 78.0 6.79e-01 100.0% 83.1%
4483819 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.86 78.0 6.60e-01 100.0% 77.1%
3554994 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.85 77.0 6.01e-01 100.0% 62.9%
3526950 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.85 77.0 6.90e-01 100.0% 90.0%
4171510 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 77.0 6.21e-01 100.0% 70.0%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 77.0 6.06e-01 100.0% 65.9%
3259033 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.85 77.0 6.85e-01 100.0% 90.0%
3269758 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.84 77.0 6.19e-01 100.0% 67.5%
3633434 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 76.0 6.46e-01 100.0% 80.0%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.84 76.0 6.70e-01 100.0% 90.5%
4104114 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.84 76.0 6.60e-01 100.0% 81.5%
3621642 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.84 76.0 6.15e-01 100.0% 68.8%
3254502 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.84 76.0 5.81e-01 100.0% 64.2%
3224981 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 75.0 6.77e-01 100.0% 91.7%
3891252 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 76.0 6.77e-01 100.0% 95.0%
3270519 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.84 75.0 6.53e-01 100.0% 86.2%
3569639 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 75.0 6.11e-01 100.0% 67.5%
3914346 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 75.0 5.87e-01 100.0% 60.0%
165657 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 75.0 6.50e-01 100.0% 80.6%
4133335 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 75.0 6.71e-01 100.0% 88.3%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.84 75.0 6.55e-01 100.0% 95.4%
4019925 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 75.0 6.37e-01 100.0% 77.1%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 75.0 6.36e-01 100.0% 78.6%
3338134 4.1.1.155 ↗ beta barrels › SH3 › SH3 › SH3 › CRR42-like 0.83 75.0 6.20e-01 100.0% 84.0%
4473115 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.83 76.0 5.68e-01 100.0% 45.0%
3906249 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.83 74.0 6.18e-01 100.0% 72.0%
3899851 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.83 75.0 6.52e-01 100.0% 83.1%
3539147 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 74.0 6.32e-01 100.0% 77.1%
3391702 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 74.0 6.04e-01 100.0% 67.5%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.83 73.0 6.62e-01 100.0% 86.7%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 73.0 6.61e-01 100.0% 86.7%
4261791 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.83 76.0 5.11e-01 100.0% 32.4%
3899829 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.83 75.0 6.19e-01 100.0% 72.0%
3258767 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.83 75.0 5.06e-01 100.0% 31.3%
3234274 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.83 74.0 6.30e-01 100.0% 80.0%
4438733 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.83 74.0 5.53e-01 100.0% 61.0%
3778257 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.82 75.0 5.11e-01 100.0% 33.6%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.82 72.0 4.78e-01 100.0% 29.1%
3774821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.55e-01 100.0% 85.0%
3872095 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 73.0 6.73e-01 97.7% 96.4%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.82 72.0 5.32e-01 100.0% 44.3%
3535437 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 74.0 6.63e-01 100.0% 90.0%
3263489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 73.0 6.38e-01 100.0% 84.6%
142250 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.82 73.0 6.38e-01 100.0% 75.4%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.82 72.0 5.76e-01 100.0% 60.0%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.82 72.0 6.07e-01 100.0% 69.9%
3895018 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.82 72.0 6.34e-01 100.0% 95.4%
3876823 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.81 72.0 6.04e-01 100.0% 72.0%
3216017 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 73.0 5.70e-01 100.0% 70.0%
3910605 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 72.0 5.90e-01 100.0% 75.0%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 71.0 6.41e-01 100.0% 85.0%
3296833 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.81 71.0 4.96e-01 100.0% 37.0%
3612092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 5.90e-01 100.0% 94.7%
3558774 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.81 71.0 6.40e-01 100.0% 83.3%
3625909 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 71.0 5.82e-01 100.0% 67.5%
3755099 604.1.1.97 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SH3_1 0.80 71.0 5.69e-01 100.0% 63.5%
3737825 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.80 70.0 6.51e-01 97.7% 96.4%
3756676 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.80 70.0 5.39e-01 100.0% 63.0%
2675860 4.1.1.15 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e 0.80 71.0 5.19e-01 100.0% 43.0%
3569289 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.79 69.0 5.71e-01 100.0% 80.0%
3700745 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 68.0 6.54e-01 100.0% 88.0%
2410170 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.77 67.0 6.01e-01 100.0% 95.2%
531 4.1.1.281 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KALRN 0.77 66.0 5.62e-01 100.0% 81.1%
3516333 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.27e-01 100.0% 80.0%
3929260 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.16e-01 100.0% 87.3%
3927460 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 6.20e-01 97.7% 96.0%
3326132 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.75e-01 100.0% 67.7%
3926017 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.04e-01 100.0% 85.5%
3411714 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.58e-01 100.0% 68.6%
3883165 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 64.0 4.95e-01 100.0% 47.0%
3879068 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 65.0 5.23e-01 100.0% 55.3%
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.83e-01 100.0% 79.3%
3504834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.81e-01 100.0% 82.8%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.73 63.0 4.86e-01 100.0% 45.0%
3243256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 4.18e-01 100.0% 28.0%
3502388 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.29e-01 100.0% 62.7%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 5.78e-01 100.0% 89.1%
3290706 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.40e-01 97.7% 87.3%
3995160 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.67 57.0 5.51e-01 100.0% 90.0%
4935801 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 51.0 3.73e-01 100.0% 89.6%
4028659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.24e-01 100.0% 77.5%
4982817 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.60 48.0 4.16e-01 100.0% 72.5%
3527472 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.58 48.0 3.51e-01 100.0% 64.4%
4028452 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 47.0 3.47e-01 100.0% 63.7%