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NC_021794.1__YP_008241273.1__Phi18-3_gp080__00080
Bact-VirNC_021794.1__YP_008241273.1__Phi18-3_gp080__00080
Identity
- Accession:
- NC_021794 ↗
- Kingdom:
- phage
Quality
82.6
mean pLDDT
Taxonomy
TaxID: 1327983
Cluster
View cluster (52 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-18_33-83
Domain cluster:
rep: MG752970.1__AVH85358.1__RsoM2USA_430__00430__D11-89
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00166.27 best | Cpn10 | 30.2 | 5.10e-07 | 95.1% | 61.3% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.90 | 85.0 | 7.04e-01 | 100.0% | 87.8% |
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.88 | 81.0 | 6.73e-01 | 100.0% | 85.0% |
| 1wlyA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.76 | 69.0 | 4.89e-01 | 100.0% | 41.7% |
| 3uogA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.76 | 70.0 | 4.77e-01 | 100.0% | 52.3% |
| 5dovB01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.75 | 70.0 | 4.76e-01 | 100.0% | 44.7% |
| 4jbgA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.75 | 68.0 | 4.66e-01 | 100.0% | 53.8% |
| 3qwbA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.74 | 69.0 | 4.74e-01 | 100.0% | 41.6% |
| 2vcyA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.74 | 68.0 | 4.77e-01 | 100.0% | 45.0% |
| 4a27A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.74 | 68.0 | 4.93e-01 | 100.0% | 50.0% |
| 5ylnB01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.74 | 68.0 | 4.59e-01 | 100.0% | 51.2% |
| 4dupA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.74 | 67.0 | 4.68e-01 | 100.0% | 42.8% |
| 1n9gA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.74 | 68.0 | 4.57e-01 | 100.0% | 43.5% |
| 3b70A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.72 | 66.0 | 4.71e-01 | 100.0% | 49.7% |
| 3gmsA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.72 | 66.0 | 4.47e-01 | 100.0% | 39.0% |
| 4ilkA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.71 | 64.0 | 4.44e-01 | 100.0% | 51.5% |
| 3jb9H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 3.99e-01 | 73.8% | 63.2% |
| 1g2bA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 50.0 | 4.98e-01 | 100.0% | 90.3% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 38.0 | 3.71e-01 | 95.1% | 61.4% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 38.0 | 3.70e-01 | 78.7% | 61.8% |
| 2dgmA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 40.0 | 2.60e-01 | 85.2% | 74.1% |
| 7bj4A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 43.0 | 2.64e-01 | 100.0% | 15.3% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.51 | 42.0 | 4.10e-01 | 98.4% | 87.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4182470 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.93 | 87.0 | 7.32e-01 | 100.0% | 89.4% |
| 3359945 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.93 | 87.0 | 7.25e-01 | 100.0% | 81.4% |
| 4029028 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.92 | 86.0 | 7.11e-01 | 100.0% | 86.0% |
| 4417276 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.91 | 85.0 | 7.00e-01 | 100.0% | 91.0% |
| 4082853 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.90 | 84.0 | 7.12e-01 | 100.0% | 89.4% |
| 3938500 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.90 | 82.0 | 7.07e-01 | 98.4% | 93.3% |
| 4341607 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.89 | 82.0 | 6.90e-01 | 100.0% | 86.7% |
| 4378688 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.89 | 82.0 | 6.94e-01 | 100.0% | 89.5% |
| 4173931 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.88 | 81.0 | 6.87e-01 | 100.0% | 89.5% |
| 3674955 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.87 | 82.0 | 7.39e-01 | 100.0% | 82.5% |
| 4024554 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.87 | 81.0 | 6.79e-01 | 100.0% | 89.8% |
| 3594024 | 236.1.2.0 ↗ | beta barrels › GroES-like › GroES-related › GroES | 0.87 | 79.0 | 6.89e-01 | 100.0% | 88.9% |
| 2794379 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.81 | 73.0 | 6.26e-01 | 100.0% | 84.2% |
| 5075226 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.77 | 71.0 | 5.23e-01 | 100.0% | 57.4% |
| 3191496 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.77 | 71.0 | 4.99e-01 | 100.0% | 58.6% |
| 3461033 | 236.1.1.2 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 | 0.76 | 70.0 | 5.10e-01 | 100.0% | 51.0% |
| 3695197 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.76 | 67.0 | 4.74e-01 | 95.1% | 64.7% |
| 5018104 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.76 | 70.0 | 4.24e-01 | 100.0% | 31.5% |
| 4020035 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.76 | 70.0 | 4.67e-01 | 100.0% | 59.1% |
| 4068091 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.76 | 70.0 | 4.96e-01 | 100.0% | 44.7% |
| 3828161 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.75 | 69.0 | 4.97e-01 | 100.0% | 50.0% |
| 3504197 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.74 | 68.0 | 4.88e-01 | 100.0% | 49.1% |
| 4487318 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.74 | 68.0 | 4.84e-01 | 100.0% | 44.1% |
| 3735367 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.74 | 67.0 | 4.73e-01 | 100.0% | 65.6% |
| 3286331 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.73 | 65.0 | 5.93e-01 | 96.7% | 100.0% |
| 3096364 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.73 | 67.0 | 5.29e-01 | 100.0% | 68.9% |
| 3970000 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 52.0 | 4.47e-01 | 80.3% | 47.0% |
| 4466452 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.72 | 66.0 | 4.67e-01 | 100.0% | 51.4% |
| 3928654 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.72 | 66.0 | 4.82e-01 | 100.0% | 52.6% |
| 4951886 | 3174.4.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain | 0.64 | 51.0 | 4.46e-01 | 98.4% | 58.9% |
| 4335022 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 3.80e-01 | 78.7% | 51.6% |
| 4404324 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.77e-01 | 80.3% | 72.9% |
| 3964508 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 48.0 | 4.52e-01 | 100.0% | 82.7% |
| 3212056 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 4.04e-01 | 98.4% | 71.2% |
| 5079397 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 42.0 | 3.89e-01 | 100.0% | 69.4% |