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NC_021798.1__YP_008241499.1__Phi17-2_gp004__00004

Bact-Vir

NC_021798.1__YP_008241499.1__Phi17-2_gp004__00004

Identity

Accession:
NC_021798 ↗
Kingdom:
phage

Quality

93.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-181
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bfmA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 36.0 3.42e-01 70.6% 70.9%
4aeeA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 24.0 3.45e-01 75.2% 100.0%
1xezA01 3.30.110.130 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain 0.50 28.0 3.57e-01 86.9% 100.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3238631 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.57 40.0 3.30e-01 70.6% 45.0%
5082663 328.2.1.1 a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_1 0.54 30.0 3.87e-01 71.2% 100.0%
5059041 328.2.1.1 a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_1 0.53 27.0 3.69e-01 71.2% 100.0%
3063008 6081.1.1.1 a+b two layers › Pro-domain of Hemolysin hlyA › Pro-domain of Hemolysin hlyA › Pro-domain of Hemolysin hlyA › Hemolysin_N 0.51 29.0 3.41e-01 96.7% 78.3%
3233815 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 35.0 2.98e-01 70.6% 42.5%
3247128 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.50 35.0 2.94e-01 70.6% 44.3%