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NC_021798.1__YP_008241499.1__Phi17-2_gp004__00004
Bact-VirNC_021798.1__YP_008241499.1__Phi17-2_gp004__00004
Identity
- Accession:
- NC_021798 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 1327972
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-181
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 36.0 | 3.42e-01 | 70.6% | 70.9% |
| 4aeeA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 24.0 | 3.45e-01 | 75.2% | 100.0% |
| 1xezA01 | 3.30.110.130 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain | 0.50 | 28.0 | 3.57e-01 | 86.9% | 100.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238631 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.57 | 40.0 | 3.30e-01 | 70.6% | 45.0% |
| 5082663 | 328.2.1.1 ↗ | a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_1 | 0.54 | 30.0 | 3.87e-01 | 71.2% | 100.0% |
| 5059041 | 328.2.1.1 ↗ | a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_1 | 0.53 | 27.0 | 3.69e-01 | 71.2% | 100.0% |
| 3063008 | 6081.1.1.1 ↗ | a+b two layers › Pro-domain of Hemolysin hlyA › Pro-domain of Hemolysin hlyA › Pro-domain of Hemolysin hlyA › Hemolysin_N | 0.51 | 29.0 | 3.41e-01 | 96.7% | 78.3% |
| 3233815 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 35.0 | 2.98e-01 | 70.6% | 42.5% |
| 3247128 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.50 | 35.0 | 2.94e-01 | 70.6% | 44.3% |