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NC_021798.1__YP_008241546.1__Phi17-2_gp051__00051
Bact-VirNC_021798.1__YP_008241546.1__Phi17-2_gp051__00051
Identity
- Accession:
- NC_021798 ↗
- Kingdom:
- phage
Quality
75.1
mean pLDDT
Taxonomy
TaxID: 1327972
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-113
Domain cluster:
rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00468__D116-186
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x9zA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 63.0 | 5.03e-01 | 100.0% | 57.0% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 62.0 | 5.60e-01 | 100.0% | 77.4% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 63.0 | 5.04e-01 | 100.0% | 62.8% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 46.0 | 3.92e-01 | 98.7% | 44.3% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 59.0 | 4.37e-01 | 100.0% | 53.0% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 46.0 | 4.31e-01 | 100.0% | 59.6% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 45.0 | 4.07e-01 | 98.7% | 51.4% |
| 2vecA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 47.0 | 4.03e-01 | 100.0% | 47.6% |
| 4amwA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 58.0 | 4.69e-01 | 100.0% | 61.5% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 58.0 | 4.57e-01 | 100.0% | 62.2% |
| 1g1cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 56.0 | 5.16e-01 | 100.0% | 79.6% |
| 2osxA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 49.0 | 4.54e-01 | 97.4% | 66.7% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 54.0 | 5.19e-01 | 98.7% | 83.1% |
| 4ba0A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 53.0 | 4.33e-01 | 97.4% | 57.7% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 53.0 | 4.48e-01 | 100.0% | 95.5% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.61 | 53.0 | 3.23e-01 | 100.0% | 14.9% |
| 4fx5A01 | 2.60.40.3670 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 51.0 | 4.25e-01 | 100.0% | 52.8% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 51.0 | 4.28e-01 | 97.4% | 55.8% |
| 6h4lA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.84e-01 | 100.0% | 81.2% |
| 1wckA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 52.0 | 4.34e-01 | 100.0% | 94.9% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.59 | 51.0 | 4.88e-01 | 100.0% | 94.4% |
| 2qnkA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 42.0 | 2.83e-01 | 98.7% | 20.3% |
| 3r4dA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.70e-01 | 100.0% | 81.5% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 4.50e-01 | 100.0% | 75.2% |
| 4dzgA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 4.56e-01 | 100.0% | 86.7% |
| 2luwA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 47.0 | 4.33e-01 | 100.0% | 69.3% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 52.0 | 4.72e-01 | 100.0% | 92.2% |
| 1sq4A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 42.0 | 3.61e-01 | 100.0% | 47.6% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.57 | 49.0 | 4.35e-01 | 97.4% | 95.7% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 49.0 | 4.42e-01 | 97.4% | 94.5% |
| 3gm8A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.37e-01 | 100.0% | 91.8% |
| 3isrA02 | 2.60.40.2250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 4.49e-01 | 100.0% | 76.0% |
| 2zotC00 | 2.60.40.4060 | Mainly Beta › Sandwich › Immunoglobulin-like › Reeler domain | 0.56 | 49.0 | 4.06e-01 | 100.0% | 81.4% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 48.0 | 4.32e-01 | 100.0% | 69.2% |
| 3i2dA01 | 2.60.120.780 | Mainly Beta › Sandwich › Jelly Rolls › PINIT domain | 0.55 | 48.0 | 3.90e-01 | 100.0% | 63.9% |
| 3rnsA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 48.0 | 4.27e-01 | 100.0% | 68.5% |
| 5e6tA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.55 | 47.0 | 4.49e-01 | 98.7% | 94.7% |
| 1uf2C02 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.83e-01 | 100.0% | 91.1% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 49.0 | 4.60e-01 | 100.0% | 82.8% |
| 2v5tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.48e-01 | 100.0% | 81.9% |
| 2d40B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 48.0 | 3.22e-01 | 100.0% | 26.1% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 48.0 | 4.24e-01 | 100.0% | 66.7% |
| 5buvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 50.0 | 3.79e-01 | 100.0% | 53.2% |
| 1m2oA01 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.55 | 48.0 | 3.84e-01 | 100.0% | 65.0% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.54 | 43.0 | 3.10e-01 | 89.6% | 78.8% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 48.0 | 4.19e-01 | 100.0% | 65.5% |
| 3bu7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 49.0 | 3.14e-01 | 100.0% | 22.0% |
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 48.0 | 4.41e-01 | 100.0% | 76.0% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 4.22e-01 | 100.0% | 71.8% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 48.0 | 4.25e-01 | 100.0% | 70.0% |
| 1nxmA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 46.0 | 3.51e-01 | 100.0% | 44.3% |
| 6f91A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 47.0 | 3.23e-01 | 100.0% | 33.1% |
| 6qe7A01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.53 | 45.0 | 3.85e-01 | 100.0% | 73.5% |
| 1vj2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 47.0 | 4.09e-01 | 100.0% | 66.7% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 45.0 | 4.06e-01 | 100.0% | 69.1% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.52 | 46.0 | 3.67e-01 | 100.0% | 49.7% |
| 1xjaB00 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.52 | 46.0 | 3.67e-01 | 100.0% | 53.2% |
| 3njzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 46.0 | 2.98e-01 | 100.0% | 22.1% |
| 2rg4A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 44.0 | 3.37e-01 | 98.7% | 42.3% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604177 | 3386.2.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 | 0.87 | 75.0 | 7.92e-01 | 96.1% | 100.0% |
| 3512122 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.71 | 60.0 | 4.49e-01 | 100.0% | 38.4% |
| 5013744 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.68 | 50.0 | 5.15e-01 | 100.0% | 81.3% |
| 3620073 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.68 | 60.0 | 4.31e-01 | 100.0% | 34.9% |
| 3259324 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 55.0 | 5.36e-01 | 98.7% | 83.5% |
| 3251334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 57.0 | 5.51e-01 | 98.7% | 85.9% |
| 3259328 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.65 | 56.0 | 5.30e-01 | 93.5% | 85.6% |
| 3616420 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 58.0 | 4.33e-01 | 100.0% | 58.4% |
| 4327703 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.65 | 51.0 | 3.93e-01 | 100.0% | 37.7% |
| 3714611 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 53.0 | 5.35e-01 | 100.0% | 93.3% |
| 3705988 | 929.1.1.0 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin | 0.64 | 50.0 | 5.18e-01 | 98.7% | 92.9% |
| 4943488 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 56.0 | 4.56e-01 | 100.0% | 52.4% |
| 3552846 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 54.0 | 4.67e-01 | 96.1% | 62.5% |
| 3332177 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 51.0 | 4.03e-01 | 100.0% | 43.1% |
| 3336643 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.63 | 55.0 | 4.33e-01 | 100.0% | 90.3% |
| 4945611 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 54.0 | 5.06e-01 | 96.1% | 78.9% |
| 4182688 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.18e-01 | 84.4% | 61.1% |
| 3188281 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 50.0 | 4.17e-01 | 100.0% | 50.7% |
| 3822365 | 206.1.1.105 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Malectin_like | 0.61 | 53.0 | 4.25e-01 | 98.7% | 98.1% |
| 3321600 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 50.0 | 4.04e-01 | 100.0% | 45.8% |
| 3768380 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.60 | 51.0 | 4.27e-01 | 97.4% | 55.7% |
| 3974066 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.60 | 41.0 | 3.35e-01 | 98.7% | 36.7% |
| 3941351 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.60 | 51.0 | 4.27e-01 | 96.1% | 60.0% |
| 3821693 | 10.32.1.37 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin | 0.60 | 51.0 | 4.13e-01 | 100.0% | 98.1% |
| 3277683 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.59 | 41.0 | 3.28e-01 | 98.7% | 34.5% |
| 1822726 | 10.12.1.23 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Asp_Arg_Hydrox | 0.59 | 44.0 | 3.30e-01 | 98.7% | 31.8% |
| 3533843 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.58 | 49.0 | 4.56e-01 | 96.1% | 74.0% |
| 3594645 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 46.0 | 3.55e-01 | 100.0% | 38.8% |
| 3884325 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.57 | 49.0 | 3.81e-01 | 100.0% | 44.9% |
| 3347492 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.57 | 49.0 | 3.83e-01 | 100.0% | 42.9% |
| 3899621 | 11.1.1.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Reeler | 0.57 | 48.0 | 3.94e-01 | 96.1% | 72.0% |
| 5039342 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 50.0 | 4.09e-01 | 100.0% | 54.5% |
| 4982154 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 48.0 | 4.49e-01 | 97.4% | 93.0% |
| None | — | 0.56 | 47.0 | 3.00e-01 | 98.7% | 16.3% | |
| 4242187 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 50.0 | 4.38e-01 | 100.0% | 89.6% |
| 1788300 | 10.32.1.10 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BcsB | 0.56 | 49.0 | 4.10e-01 | 100.0% | 61.0% |
| 3970143 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 49.0 | 3.99e-01 | 100.0% | 52.9% |
| 5045353 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 47.0 | 4.24e-01 | 100.0% | 89.6% |
| 3280944 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 48.0 | 4.12e-01 | 100.0% | 60.0% |
| 1279907 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 49.0 | 3.65e-01 | 100.0% | 39.8% |
| 5017493 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 49.0 | 4.34e-01 | 100.0% | 70.9% |
| 4561982 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 48.0 | 3.65e-01 | 100.0% | 40.5% |
| 5062269 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 48.0 | 4.22e-01 | 100.0% | 66.1% |
| 3688349 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 48.0 | 4.14e-01 | 100.0% | 62.5% |
| 5017338 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 48.0 | 4.30e-01 | 100.0% | 71.6% |
| 4683384 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 46.0 | 3.86e-01 | 100.0% | 81.4% |
| 4962210 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 48.0 | 4.30e-01 | 100.0% | 71.8% |
| 3496386 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 46.0 | 3.80e-01 | 100.0% | 95.3% |
| 4608666 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.54 | 47.0 | 3.64e-01 | 100.0% | 43.4% |
| 3588172 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 45.0 | 3.61e-01 | 96.1% | 47.3% |
| 3600462 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 44.0 | 4.42e-01 | 100.0% | 95.0% |
| 4998421 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 47.0 | 4.19e-01 | 100.0% | 69.1% |
| 3942603 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 46.0 | 3.70e-01 | 100.0% | 48.4% |
| 3475059 | 10.32.1.224 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD-like_ZMIZ1_ZMIZ2 | 0.53 | 45.0 | 3.69e-01 | 100.0% | 94.2% |
| 3258529 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 45.0 | 4.20e-01 | 98.7% | 85.0% |
| 3387563 | 10.12.1.64 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ExsA_N | 0.52 | 46.0 | 3.56e-01 | 100.0% | 42.8% |
| 3279676 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 47.0 | 4.09e-01 | 100.0% | 67.8% |
| 3969365 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.52 | 45.0 | 3.55e-01 | 100.0% | 45.5% |
| 4988382 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 46.0 | 4.06e-01 | 100.0% | 69.0% |
| 3976748 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.52 | 45.0 | 3.60e-01 | 100.0% | 47.5% |
| 2516467 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.52 | 46.0 | 3.59e-01 | 100.0% | 46.7% |
| 3968985 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 45.0 | 3.55e-01 | 100.0% | 46.9% |
| 3974206 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.51 | 44.0 | 3.55e-01 | 100.0% | 48.4% |
| 3421650 | 10.32.1.199 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF642 | 0.51 | 44.0 | 3.87e-01 | 100.0% | 73.3% |
| 3941578 | 10.12.1.104 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding, Cupin_2 | 0.51 | 45.0 | 3.60e-01 | 100.0% | 49.0% |
| 4497102 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 45.0 | 3.45e-01 | 100.0% | 43.3% |
| 3968004 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 44.0 | 3.56e-01 | 100.0% | 48.4% |
| 3590244 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 45.0 | 3.48e-01 | 100.0% | 45.3% |
| 4466584 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.50 | 44.0 | 3.56e-01 | 100.0% | 50.7% |
| 3945831 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.50 | 44.0 | 3.46e-01 | 100.0% | 46.1% |
| 4035889 | 10.12.1.61 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_N | 0.50 | 43.0 | 3.02e-01 | 100.0% | 27.9% |
| 1759342 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.50 | 43.0 | 4.20e-01 | 97.4% | 89.3% |
D2
medium
residues 157-257_294-310
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.82 | 77.0 | 5.11e-01 | 100.0% | 47.5% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 74.0 | 5.81e-01 | 100.0% | 79.2% |
| 1ru4A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 73.0 | 4.91e-01 | 100.0% | 38.2% |
| 7dmkA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 72.0 | 5.27e-01 | 100.0% | 55.2% |
| 3gq8A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 72.0 | 4.68e-01 | 100.0% | 36.9% |
| 4c2lA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 4.84e-01 | 100.0% | 41.7% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 69.0 | 5.13e-01 | 100.0% | 67.0% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 70.0 | 4.95e-01 | 100.0% | 43.2% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 69.0 | 5.07e-01 | 100.0% | 62.1% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 66.0 | 5.48e-01 | 97.5% | 64.0% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 66.0 | 4.60e-01 | 100.0% | 51.4% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 65.0 | 4.73e-01 | 100.0% | 59.5% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 57.0 | 4.88e-01 | 100.0% | 67.6% |
| 1igrA01 | 3.80.20.20 | Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain | 0.61 | 55.0 | 4.75e-01 | 100.0% | 66.3% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 51.0 | 4.64e-01 | 100.0% | 67.5% |
| 1wwlB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 54.0 | 3.96e-01 | 97.5% | 54.2% |
| 4pufA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 49.0 | 3.64e-01 | 97.5% | 34.2% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 50.0 | 4.54e-01 | 100.0% | 68.2% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 47.0 | 4.33e-01 | 100.0% | 67.7% |
| 4r5dA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.57 | 50.0 | 4.38e-01 | 100.0% | 96.7% |
| 2z7xA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.56 | 49.0 | 3.23e-01 | 100.0% | 27.7% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 49.0 | 4.31e-01 | 96.6% | 73.8% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 49.0 | 4.17e-01 | 100.0% | 91.7% |
| 1h6uA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.53 | 47.0 | 4.26e-01 | 100.0% | 84.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1121177 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.78 | 74.0 | 5.81e-01 | 100.0% | 79.2% |
| 364252 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.76 | 71.0 | 4.63e-01 | 100.0% | 39.3% |
| 3965473 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 70.0 | 5.46e-01 | 100.0% | 58.7% |
| 3255220 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 68.0 | 4.98e-01 | 100.0% | 74.4% |
| 5039543 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 69.0 | 4.69e-01 | 100.0% | 54.6% |
| 5034451 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 69.0 | 5.22e-01 | 100.0% | 50.8% |
| 5044981 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.74 | 69.0 | 4.73e-01 | 100.0% | 43.5% |
| 4981379 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 5.46e-01 | 100.0% | 57.8% |
| 2082632 | 207.2.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Adeno_E1B_55K | 0.73 | 68.0 | 4.79e-01 | 100.0% | 51.6% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 68.0 | 5.89e-01 | 100.0% | 72.0% |
| 4980606 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 69.0 | 5.97e-01 | 100.0% | 71.2% |
| 4963682 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 67.0 | 5.92e-01 | 100.0% | 83.0% |
| 3254620 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 65.0 | 4.44e-01 | 100.0% | 40.5% |
| 2041632 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.71 | 65.0 | 4.68e-01 | 99.2% | 51.3% |
| 3997590 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.70 | 37.0 | 4.93e-01 | 82.2% | 100.0% |
| 5062670 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 66.0 | 4.84e-01 | 100.0% | 59.3% |
| 5043648 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 63.0 | 5.46e-01 | 100.0% | 75.0% |
| 3335252 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.68 | 63.0 | 5.28e-01 | 100.0% | 85.1% |
| 3844962 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.66 | 51.0 | 5.14e-01 | 100.0% | 80.8% |
| 5034080 | 207.2.2.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin | 0.66 | 54.0 | 5.55e-01 | 100.0% | 92.7% |
| 3367733 | 207.1.1.77 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD | 0.64 | 56.0 | 4.38e-01 | 97.5% | 50.8% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 49.0 | 4.67e-01 | 100.0% | 68.6% |
| 3625269 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.63 | 56.0 | 4.19e-01 | 100.0% | 51.8% |
| 4040388 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.63 | 56.0 | 3.82e-01 | 100.0% | 48.5% |
| 4981810 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.62 | 57.0 | 4.67e-01 | 100.0% | 57.7% |
| 3684090 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 39.0 | 4.60e-01 | 81.4% | 98.7% |
| 3644440 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.61 | 53.0 | 3.81e-01 | 95.8% | 39.7% |
| 3945380 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.61 | 46.0 | 4.90e-01 | 100.0% | 93.0% |
| 4888693 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.61 | 49.0 | 4.76e-01 | 97.5% | 77.7% |
| 3877532 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.60 | 39.0 | 3.62e-01 | 100.0% | 52.0% |
| 5027962 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 53.0 | 4.18e-01 | 99.2% | 65.2% |
| 3306110 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.60 | 53.0 | 3.59e-01 | 96.6% | 26.5% |
| 3266611 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 55.0 | 4.53e-01 | 100.0% | 61.8% |
| 4028145 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.60 | 54.0 | 4.97e-01 | 100.0% | 81.2% |
| 4940774 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.59 | 48.0 | 5.03e-01 | 100.0% | 96.2% |
| 3812365 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.59 | 46.0 | 4.86e-01 | 100.0% | 93.3% |
| 3699914 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.58 | 35.0 | 3.69e-01 | 86.4% | 65.7% |
| 3269647 | 207.1.1.129 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_ComC | 0.57 | 50.0 | 3.80e-01 | 97.5% | 44.8% |
| 3425805 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.56 | 36.0 | 3.64e-01 | 94.9% | 63.3% |
| 3713644 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.56 | 50.0 | 4.19e-01 | 96.6% | 70.8% |
| 3426695 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.56 | 50.0 | 3.38e-01 | 100.0% | 37.2% |
| 1380293 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.56 | 48.0 | 4.69e-01 | 100.0% | 86.5% |
| 3254891 | 207.6.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Nucleoporin_FG | 0.55 | 48.0 | 4.66e-01 | 96.6% | 86.7% |
| 4002248 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.55 | 48.0 | 4.00e-01 | 99.2% | 95.8% |
| 3747395 | 207.6.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › SBSN_GxHH_rpt | 0.53 | 48.0 | 3.61e-01 | 100.0% | 44.8% |
| 4452301 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.51 | 46.0 | 3.06e-01 | 100.0% | 25.7% |
D3
medium
residues 258-293_311-457
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ru4A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 73.0 | 5.45e-01 | 100.0% | 45.8% |
| 3gq8A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 72.0 | 5.19e-01 | 100.0% | 47.0% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 70.0 | 5.88e-01 | 100.0% | 77.9% |
| 1idjA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 69.0 | 5.37e-01 | 100.0% | 74.4% |
| 2vjiA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 68.0 | 4.99e-01 | 100.0% | 47.1% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 66.0 | 6.07e-01 | 100.0% | 79.6% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 52.0 | 3.73e-01 | 100.0% | 28.3% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.68 | 51.0 | 5.02e-01 | 100.0% | 72.2% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 65.0 | 5.13e-01 | 100.0% | 56.4% |
| 3n6zA01 | 2.160.20.110 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 64.0 | 5.58e-01 | 100.0% | 93.2% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 46.0 | 4.96e-01 | 97.8% | 79.6% |
| 4cnmA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.53 | 46.0 | 4.03e-01 | 98.9% | 61.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944455 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.83 | 68.0 | 5.82e-01 | 100.0% | 57.0% |
| 5033010 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.82 | 68.0 | 5.15e-01 | 100.0% | 41.3% |
| 5050079 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.81 | 68.0 | 6.09e-01 | 100.0% | 66.4% |
| 4982332 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 64.0 | 5.40e-01 | 100.0% | 53.8% |
| 5060097 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.80 | 69.0 | 5.33e-01 | 100.0% | 46.3% |
| 4980561 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 69.0 | 5.29e-01 | 100.0% | 44.3% |
| 4415076 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.79 | 69.0 | 5.61e-01 | 100.0% | 52.7% |
| 4981810 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 63.0 | 5.96e-01 | 100.0% | 70.2% |
| 3708824 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 68.0 | 5.57e-01 | 100.0% | 56.2% |
| 3286791 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.75 | 45.0 | 5.69e-01 | 96.2% | 98.2% |
| 5033194 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 60.0 | 6.14e-01 | 100.0% | 83.9% |
| 5043648 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 56.0 | 5.68e-01 | 100.0% | 77.8% |
| 3479885 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.75 | 55.0 | 5.79e-01 | 98.9% | 83.6% |
| 4856486 | 207.9.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › LD_SV2 | 0.74 | 42.0 | 5.33e-01 | 89.6% | 91.0% |
| 5069437 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 63.0 | 5.36e-01 | 100.0% | 59.3% |
| 2783205 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 69.0 | 5.88e-01 | 100.0% | 77.9% |
| 4202478 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.72 | 66.0 | 5.38e-01 | 100.0% | 55.2% |
| 4542541 | 207.9.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_3, Pentapeptide_4 | 0.72 | 52.0 | 5.16e-01 | 100.0% | 70.5% |
| 5017766 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 70.0 | 4.94e-01 | 100.0% | 38.5% |
| 3272854 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 69.0 | 5.95e-01 | 100.0% | 86.8% |
| 2491350 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 67.0 | 5.27e-01 | 100.0% | 56.0% |
| 3251722 | 207.2.1.62 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › G8+CEMIP_beta-hel | 0.70 | 67.0 | 4.44e-01 | 100.0% | 43.4% |
| 3923083 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 64.0 | 6.00e-01 | 100.0% | 80.9% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 59.0 | 6.05e-01 | 100.0% | 92.6% |
| 4284396 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.69 | 65.0 | 5.02e-01 | 100.0% | 63.7% |
| 3260886 | 207.2.1.72 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29671 | 0.68 | 52.0 | 4.40e-01 | 100.0% | 48.8% |
| 3717673 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 66.0 | 4.49e-01 | 100.0% | 34.9% |
| 4981765 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 65.0 | 5.21e-01 | 100.0% | 66.9% |
| 3779006 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.67 | 64.0 | 4.80e-01 | 100.0% | 45.4% |
| 5034346 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.66 | 63.0 | 5.01e-01 | 100.0% | 55.4% |
| 4884477 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.65 | 57.0 | 5.53e-01 | 91.8% | 93.5% |
| 3268558 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.63 | 56.0 | 3.91e-01 | 100.0% | 31.3% |
| 3715374 | 207.14.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet | 0.63 | 32.0 | 4.07e-01 | 75.4% | 82.9% |
| 3778106 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.57 | 48.0 | 3.82e-01 | 90.2% | 52.5% |
| 3431867 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 47.0 | 3.76e-01 | 100.0% | 47.5% |
| 3716144 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.52 | 29.0 | 3.04e-01 | 97.8% | 54.9% |
| 3492291 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.52 | 43.0 | 4.52e-01 | 97.8% | 96.9% |
| 3699914 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.51 | 28.0 | 3.62e-01 | 94.0% | 93.3% |
D4
medium
residues 458-611