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NC_021798.1__YP_008241551.1__Phi17-2_gp056__00056
Bact-VirNC_021798.1__YP_008241551.1__Phi17-2_gp056__00056
Identity
- Accession:
- NC_021798 ↗
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Taxonomy
TaxID: 1327972
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 96-135
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b22A00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.64 | 43.0 | 3.66e-01 | 70.0% | 92.9% |
| 2gz4A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 46.0 | 2.92e-01 | 100.0% | 16.0% |
| 3icjA03 | 3.10.310.70 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.61 | 43.0 | 3.22e-01 | 75.0% | 68.6% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 48.0 | 3.32e-01 | 97.5% | 29.4% |
| 6mfcA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 39.0 | 2.47e-01 | 82.5% | 49.7% |
| 3vpsB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 2.79e-01 | 100.0% | 35.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607942 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.64 | 37.0 | 2.76e-01 | 100.0% | 24.2% |
| 3212951 | 109.4.1.1251 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_XPO7 | 0.58 | 42.0 | 2.27e-01 | 80.0% | 8.3% |
| 3962239 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 44.0 | 2.79e-01 | 95.0% | 39.5% |