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NC_021798.1__YP_008241597.1__Phi17-2_gp102__00102

Bact-Vir

Identity

Accession:: NC_021798 ↗
Kingdom:: phage

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lightbulbvirus› Cellulophaga_phage_phi17:2

TaxID: 1327972

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-79

PDB

Domain cluster: rep: MN988514.1__QIG70067.1__EVB86_019__00019__D22-73

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2kw6A00	6.10.140.1300	Special › Helix non-globular › Helix Hairpins ›	0.75	57.0	5.78e-01	78.8%	90.8%
2iexA02	1.10.12.10	Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2	0.66	42.0	4.69e-01	71.2%	84.3%
1mldA01	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.63	46.0	3.59e-01	77.3%	69.7%
6ll8A01	3.90.1640.10	Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core)	0.63	48.0	3.47e-01	83.3%	88.2%
1hzfA00	1.50.10.20	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.60	47.0	3.10e-01	87.9%	62.3%
4xr7E01	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.60	49.0	3.09e-01	87.9%	60.4%
3spcA02	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	53.0	4.23e-01	100.0%	57.5%
7smgD00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.56	39.0	3.18e-01	77.3%	35.2%
4irnA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.54	42.0	3.49e-01	84.8%	85.7%
1vb3A01	3.90.1380.10	Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain	0.54	37.0	3.55e-01	86.4%	59.3%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3985511	7523.1.1.25 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd	0.77	63.0	4.00e-01	87.9%	64.0%
3568926	7515.1.1.6 ↗	a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest	0.63	54.0	3.34e-01	97.0%	44.7%
3596937	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.62	47.0	4.11e-01	81.8%	75.0%
3955834	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.60	48.0	3.28e-01	92.4%	27.5%
3714462	2498.1.1.36 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › WLM	0.59	44.0	3.45e-01	80.3%	51.0%
3941425	109.4.1.697 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Transposase_31	0.58	53.0	4.13e-01	100.0%	73.3%
5066420	7516.1.1.2 ↗	a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2	0.57	47.0	3.14e-01	95.5%	33.7%
3428408	632.2.1.30 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › Auxin_canalis	0.54	46.0	4.42e-01	93.9%	89.3%
4061943	2005.1.1.2 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b	0.54	41.0	2.59e-01	81.8%	68.2%