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NC_021798.1__YP_008241629.1__Phi17-2_gp134__00134

Bact-Vir

NC_021798.1__YP_008241629.1__Phi17-2_gp134__00134

Identity

Accession:
NC_021798 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-54
PDB
Domain cluster: representative
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eg3A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.74 50.0 5.60e-01 76.9% 97.4%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 50.0 3.10e-01 75.0% 80.1%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.71 46.0 4.16e-01 75.0% 47.9%
1gxrA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 51.0 3.12e-01 76.9% 34.0%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 50.0 3.08e-01 76.9% 39.3%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 51.0 3.12e-01 80.8% 33.3%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 51.0 3.06e-01 80.8% 42.8%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 50.0 3.09e-01 82.7% 50.1%
3v9fA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 49.0 3.05e-01 78.8% 53.1%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 49.0 3.07e-01 78.8% 24.2%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 51.0 3.10e-01 82.7% 40.9%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 48.0 3.56e-01 76.9% 73.0%
5h1kB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 50.0 3.10e-01 84.6% 51.4%
3jbtA06 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 48.0 3.01e-01 80.8% 53.8%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 52.0 3.12e-01 88.5% 86.0%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 47.0 2.96e-01 80.8% 36.9%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 47.0 2.93e-01 80.8% 49.3%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.64 47.0 4.56e-01 78.8% 70.2%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 46.0 2.89e-01 80.8% 32.6%
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 46.0 2.84e-01 78.8% 31.9%
5cq2A02 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.63 47.0 5.07e-01 96.2% 95.3%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 47.0 2.90e-01 80.8% 22.3%
1a2pA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.63 48.0 3.90e-01 86.5% 91.7%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 49.0 3.01e-01 90.4% 79.3%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 49.0 3.00e-01 86.5% 20.3%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 43.0 4.28e-01 71.2% 81.5%
3jamg01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 45.0 2.88e-01 80.8% 38.1%
2xzmR01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 46.0 2.88e-01 80.8% 38.2%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 47.0 2.87e-01 84.6% 85.1%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 47.0 4.21e-01 82.7% 89.3%
5hqgA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 47.0 2.96e-01 88.5% 37.3%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.62 46.0 4.67e-01 82.7% 100.0%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.61 41.0 3.34e-01 86.5% 34.9%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 46.0 2.98e-01 90.4% 35.8%
5bxrA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 49.0 3.67e-01 94.2% 95.0%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 47.0 3.45e-01 86.5% 47.2%
7o06C01 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.60 45.0 3.73e-01 80.8% 83.5%
3ow8C00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 49.0 3.10e-01 94.2% 99.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.94e-01 92.3% 92.3%
2ymsA00 2.40.128.630 Mainly Beta › Beta Barrel › Lipocalin › 0.60 45.0 3.45e-01 82.7% 58.1%
4lg9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 48.0 2.98e-01 96.2% 93.7%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 46.0 3.53e-01 86.5% 53.7%
2wyhB06 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.59 45.0 2.92e-01 88.5% 55.8%
3jb9K01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 47.0 3.00e-01 94.2% 24.4%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 42.0 3.67e-01 75.0% 70.9%
4wjsA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 48.0 2.93e-01 94.2% 99.7%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 44.0 3.73e-01 100.0% 46.9%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.57e-01 94.2% 79.4%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 48.0 2.96e-01 92.3% 99.1%
1kb0A01 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.58 43.0 2.54e-01 88.5% 82.8%
2ymsB00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 44.0 4.01e-01 84.6% 90.5%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.58 39.0 4.00e-01 73.1% 86.5%
2jxwA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.57 42.0 3.72e-01 78.8% 84.0%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.82e-01 94.2% 80.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.23e-01 80.8% 94.1%
4j87A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.87e-01 96.2% 82.9%
4le7A02 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.56 42.0 3.78e-01 86.5% 85.4%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.56 43.0 3.17e-01 88.5% 29.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 4.05e-01 80.8% 83.9%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.56 38.0 4.03e-01 73.1% 95.7%
1r5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.79e-01 96.2% 23.6%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.09e-01 94.2% 69.9%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 44.0 3.36e-01 96.2% 39.0%
8dc1A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 42.0 2.82e-01 100.0% 19.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 37.0 3.61e-01 71.2% 91.5%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.48e-01 86.5% 96.8%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.54 45.0 4.48e-01 92.3% 100.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 3.74e-01 100.0% 58.0%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.53 42.0 3.50e-01 100.0% 70.6%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.52 41.0 3.53e-01 100.0% 66.7%
4pbpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 2.97e-01 100.0% 42.2%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.51 39.0 3.27e-01 96.2% 83.1%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 35.0 3.41e-01 73.1% 90.2%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 40.0 2.65e-01 100.0% 41.4%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.50 42.0 3.30e-01 100.0% 42.9%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 35.0 3.37e-01 73.1% 84.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 38.0 3.89e-01 88.5% 90.2%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3265851 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.78 50.0 5.61e-01 80.8% 85.0%
3741807 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.76 51.0 5.41e-01 75.0% 80.0%
3579710 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.76 52.0 4.05e-01 71.2% 38.1%
3827907 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.74 49.0 4.86e-01 75.0% 63.6%
3435779 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.73 47.0 4.63e-01 76.9% 61.8%
3644147 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.73 49.0 5.02e-01 75.0% 70.0%
3624687 64.1.1.9 beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 0.73 48.0 4.95e-01 80.8% 70.0%
3506770 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.73 50.0 3.02e-01 73.1% 45.8%
3552883 64.1.1.9 beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 0.73 48.0 4.21e-01 75.0% 46.7%
3193899 5.1.4.323 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_1st 0.73 52.0 2.85e-01 76.9% 10.1%
3741358 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 50.0 3.22e-01 76.9% 16.2%
3452448 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.72 53.0 3.19e-01 78.8% 32.7%
3502859 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 52.0 3.28e-01 78.8% 31.7%
3660003 5.1.10.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › ANAPC4_WD40 0.71 47.0 4.11e-01 75.0% 45.0%
3479291 5.1.5.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR19_2nd 0.71 52.0 3.16e-01 78.8% 38.5%
3380688 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.70 57.0 3.51e-01 88.5% 94.8%
3594271 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.70 51.0 3.18e-01 76.9% 38.0%
3390301 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.70 52.0 3.24e-01 78.8% 56.6%
3928816 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 51.0 3.08e-01 78.8% 35.8%
3494544 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.70 52.0 3.19e-01 78.8% 37.8%
3576662 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 52.0 3.26e-01 80.8% 41.7%
3821141 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.69 50.0 3.08e-01 76.9% 23.8%
3480502 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 52.0 2.95e-01 82.7% 20.3%
3484105 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.69 55.0 3.93e-01 82.7% 56.7%
3895602 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.69 52.0 3.25e-01 78.8% 56.3%
3485317 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 52.0 2.94e-01 82.7% 20.0%
3845022 5.1.11.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.69 51.0 2.93e-01 82.7% 20.2%
3259509 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.69 51.0 3.15e-01 80.8% 35.9%
3243384 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 51.0 3.15e-01 78.8% 38.5%
4016523 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 50.0 3.03e-01 78.8% 21.8%
3457326 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 53.0 3.44e-01 86.5% 20.2%
3996305 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.68 50.0 3.05e-01 78.8% 41.4%
3805053 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.68 49.0 3.03e-01 76.9% 27.8%
3877803 5.1.4.463 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_NWD2_C 0.67 50.0 2.97e-01 80.8% 19.0%
3515415 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 49.0 2.68e-01 78.8% 16.8%
3211395 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.67 50.0 3.10e-01 78.8% 53.4%
3938865 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 50.0 3.01e-01 80.8% 31.8%
3893163 5.1.2.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 0.67 47.0 3.49e-01 75.0% 84.4%
3924096 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.66 50.0 3.11e-01 80.8% 60.3%
3912315 5.1.4.371 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz 0.66 50.0 2.88e-01 80.8% 15.2%
4616630 5.1.5.79 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, WDR90_beta-prop_4th 0.66 48.0 2.94e-01 75.0% 42.1%
3940294 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 50.0 2.84e-01 82.7% 13.9%
3692025 5.1.4.311 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NUP159_NUP214 0.65 51.0 3.18e-01 88.5% 79.0%
3659251 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 48.0 3.01e-01 78.8% 26.9%
3373479 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.65 53.0 3.34e-01 90.4% 89.1%
3314307 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.65 49.0 3.02e-01 82.7% 48.1%
3743943 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.65 49.0 2.89e-01 84.6% 35.5%
3708740 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 48.0 2.84e-01 80.8% 22.9%
3947013 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 48.0 4.07e-01 86.5% 47.8%
None 0.64 53.0 3.30e-01 94.2% 74.6%
3518935 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 50.0 3.08e-01 88.5% 67.8%
4444945 5.1.4.435 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, eIF2A, Beta-prop_NOL10_N 0.63 49.0 3.06e-01 88.5% 80.8%
3806989 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.63 48.0 2.99e-01 82.7% 30.2%
None 0.63 49.0 3.09e-01 88.5% 39.0%
3851160 5.1.5.61 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Frtz 0.63 46.0 2.68e-01 82.7% 38.8%
3803793 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.63 50.0 3.13e-01 88.5% 93.2%
3844573 5.1.3.170 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.63 49.0 3.01e-01 88.5% 60.0%
3466257 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.63 51.0 3.08e-01 88.5% 91.9%
3826250 5.1.4.254 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.63 49.0 2.72e-01 86.5% 44.0%
4022249 5.1.5.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.63 49.0 2.95e-01 92.3% 19.3%
3439915 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 48.0 3.02e-01 84.6% 29.2%
3763123 5.1.4.371 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz 0.62 45.0 2.74e-01 82.7% 52.6%
3512655 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 51.0 3.06e-01 94.2% 18.4%
4561895 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.62 47.0 3.20e-01 86.5% 91.0%
3820829 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.61 45.0 2.83e-01 80.8% 24.6%
None 0.61 47.0 3.05e-01 88.5% 43.8%
3936285 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 45.0 2.88e-01 80.8% 29.8%
3359021 5.1.5.86 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 0.61 47.0 2.91e-01 88.5% 43.5%
3827973 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.61 45.0 2.81e-01 80.8% 28.1%
3576905 11.1.1.1009 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26432 0.60 46.0 2.70e-01 88.5% 17.0%
3384630 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 50.0 3.22e-01 96.2% 32.9%
3754138 5.1.4.302 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EML 0.60 46.0 2.81e-01 88.5% 20.8%
4029125 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.60 48.0 2.93e-01 90.4% 93.0%
4203266 5.1.4.100 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.60 46.0 2.70e-01 88.5% 29.2%
3935617 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 46.0 2.86e-01 88.5% 20.3%
3596935 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 49.0 3.05e-01 94.2% 89.2%
3820157 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.59 46.0 3.19e-01 88.5% 67.6%
3807481 5.1.4.237 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_2nd 0.59 49.0 3.00e-01 96.2% 97.4%
3711659 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.59 47.0 2.93e-01 88.5% 22.4%
3805925 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 47.0 2.91e-01 90.4% 88.1%
3609484 5.1.5.113 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR19_1st 0.59 46.0 2.84e-01 90.4% 29.9%
4020376 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.59 44.0 2.78e-01 92.3% 14.6%
3414211 109.54.1.0 alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.59 48.0 2.71e-01 96.2% 80.0%
3505046 5.1.2.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 0.58 43.0 3.40e-01 80.8% 48.7%
4029129 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 46.0 2.89e-01 92.3% 20.1%
5022991 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 44.0 3.75e-01 100.0% 48.9%
3718292 5.1.11.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.57 49.0 2.91e-01 100.0% 20.0%
3255424 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.57 46.0 3.38e-01 96.2% 52.7%
3661053 5.1.5.132 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF7899 0.57 45.0 2.75e-01 98.1% 19.3%
3763965 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.57 43.0 2.68e-01 88.5% 25.4%
3896806 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.55 41.0 2.46e-01 88.5% 17.3%
3712663 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.55 44.0 3.73e-01 94.2% 57.9%
3550096 5.1.4.425 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR19_1st 0.54 45.0 2.77e-01 100.0% 23.7%
D2 medium residues 61-128
PDB
D3 medium residues 139-173
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hwtA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.71 55.0 4.12e-01 100.0% 82.7%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.69 53.0 4.07e-01 100.0% 91.8%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.66 51.0 3.61e-01 97.1% 27.1%
2y8nB01 2.20.70.100 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.66 48.0 4.75e-01 100.0% 73.8%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.65 52.0 3.59e-01 100.0% 44.8%
1bu6O01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 3.15e-01 94.3% 51.0%
4hn7A00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 44.0 3.39e-01 71.4% 77.6%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 47.0 4.66e-01 97.1% 84.6%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.60 47.0 3.93e-01 97.1% 66.2%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 42.0 3.62e-01 88.6% 52.9%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 42.0 3.98e-01 100.0% 70.2%
5bmnA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.59 44.0 3.19e-01 91.4% 60.5%
3hrdB02 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.58 48.0 3.23e-01 100.0% 34.9%
1u5mA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.57 38.0 3.88e-01 71.4% 75.0%
4o2zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 46.0 3.09e-01 100.0% 68.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 37.0 3.63e-01 80.0% 100.0%
5lnk103 3.10.20.600 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 40.0 3.08e-01 97.1% 62.9%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 42.0 2.84e-01 100.0% 90.0%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 36.0 3.38e-01 88.6% 56.4%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4961538 2002.1.1.256 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C 0.80 68.0 3.82e-01 100.0% 9.1%
3279033 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 60.0 4.82e-01 97.1% 44.0%
3767237 101.1.1.386 alpha arrays › HTH › HTH › Three-helical HTH › zf-C2H2_4 0.72 58.0 4.33e-01 100.0% 44.4%
3499778 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.71 56.0 5.13e-01 100.0% 64.8%
3936595 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.71 57.0 4.97e-01 100.0% 95.0%
3616640 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 54.0 4.06e-01 100.0% 38.1%
3312039 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 54.0 4.97e-01 100.0% 66.0%
3238170 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 54.0 4.91e-01 100.0% 76.4%
3992839 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 52.0 5.06e-01 100.0% 88.9%
3484622 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.68 51.0 4.22e-01 100.0% 42.5%
4966836 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 55.0 4.89e-01 100.0% 100.0%
3692529 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 52.0 5.12e-01 100.0% 92.5%
3245636 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.66 51.0 4.64e-01 100.0% 78.2%
4945128 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 45.0 4.50e-01 80.0% 74.3%
4163716 386.1.1.6 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.64 53.0 4.70e-01 100.0% 63.6%
3382057 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 47.0 3.87e-01 97.1% 70.6%
4024732 295.1.1.40 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Microp_apicomplexa_10 0.62 50.0 4.02e-01 100.0% 65.0%
4404324 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 51.0 3.94e-01 100.0% 41.2%
4372560 71.1.1.6 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LppX_LprAFG 0.59 43.0 2.76e-01 88.6% 27.0%
3314730 375.1.1.13 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae 0.59 43.0 3.73e-01 82.9% 53.3%
1933939 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 42.0 2.91e-01 91.4% 22.2%
4985393 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 42.0 3.61e-01 94.3% 68.0%
4937198 7528.1.1.3 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_III 0.58 49.0 3.49e-01 100.0% 86.4%
4976876 7528.1.1.3 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_III 0.57 42.0 3.12e-01 91.4% 62.6%
5073392 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.57 43.0 3.25e-01 85.7% 98.9%
5000834 7528.1.1.3 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_III 0.57 42.0 3.17e-01 91.4% 65.5%
5051523 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.56 43.0 3.17e-01 100.0% 60.0%
3896583 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.54 43.0 2.77e-01 91.4% 18.9%
3781717 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.53 46.0 2.93e-01 100.0% 27.6%
5076421 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.52 39.0 2.63e-01 100.0% 48.1%