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NC_021798.1__YP_008241640.1__Phi17-2_gp145__00145
Bact-VirNC_021798.1__YP_008241640.1__Phi17-2_gp145__00145
Identity
- Accession:
- NC_021798 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
TaxID: 1327972
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-94_166-194
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_100001590__D25-113_192-212
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3drxB03 | 3.30.70.2000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 29.0 | 4.15e-01 | 76.4% | 98.0% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.58 | 29.0 | 3.93e-01 | 76.4% | 93.8% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 35.0 | 3.94e-01 | 82.9% | 78.7% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.57 | 37.0 | 4.27e-01 | 80.5% | 92.9% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 43.0 | 4.27e-01 | 85.4% | 75.0% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 36.0 | 4.16e-01 | 78.9% | 88.6% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.57 | 34.0 | 3.38e-01 | 76.4% | 55.5% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.56 | 38.0 | 4.25e-01 | 79.7% | 89.4% |
| 2ldyA01 | 3.30.70.1820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › L1 transposable element, RRM domain | 0.55 | 39.0 | 4.34e-01 | 80.5% | 92.9% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.55 | 30.0 | 3.88e-01 | 76.4% | 98.5% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.55 | 37.0 | 4.19e-01 | 82.1% | 93.3% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 33.0 | 3.78e-01 | 81.3% | 82.0% |
| 3e3pA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 29.0 | 3.45e-01 | 76.4% | 76.9% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 32.0 | 3.66e-01 | 78.9% | 78.7% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.55 | 38.0 | 3.81e-01 | 82.1% | 70.7% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 31.0 | 3.72e-01 | 82.9% | 85.2% |
| 3uwpA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 27.0 | 2.22e-01 | 76.4% | 25.0% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 32.0 | 3.79e-01 | 82.1% | 89.9% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 36.0 | 3.85e-01 | 84.6% | 79.2% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.54 | 36.0 | 4.15e-01 | 80.5% | 96.5% |
| 2qndA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 34.0 | 4.06e-01 | 85.4% | 100.0% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 32.0 | 3.52e-01 | 79.7% | 72.5% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 35.0 | 3.77e-01 | 83.7% | 79.6% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 31.0 | 3.71e-01 | 82.9% | 88.7% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.54e-01 | 79.7% | 73.8% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.50e-01 | 79.7% | 71.0% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 4.04e-01 | 82.9% | 96.6% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.52 | 27.0 | 3.06e-01 | 76.4% | 62.4% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 4.18e-01 | 87.0% | 89.1% |
| 6bq9A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.52 | 33.0 | 3.64e-01 | 86.2% | 81.9% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 27.0 | 3.04e-01 | 76.4% | 62.1% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 32.0 | 3.40e-01 | 82.1% | 70.1% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.52 | 32.0 | 3.56e-01 | 79.7% | 78.1% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 31.0 | 3.66e-01 | 82.1% | 91.1% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 36.0 | 3.68e-01 | 73.2% | 93.5% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.44e-01 | 79.7% | 73.1% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.39e-01 | 82.1% | 70.8% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.51 | 38.0 | 4.06e-01 | 76.4% | 89.6% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 33.0 | 3.65e-01 | 85.4% | 82.7% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.47e-01 | 82.9% | 72.9% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 30.0 | 3.53e-01 | 81.3% | 85.5% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 31.0 | 3.38e-01 | 82.1% | 73.3% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.50 | 34.0 | 3.69e-01 | 85.4% | 82.5% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.50 | 30.0 | 3.47e-01 | 82.9% | 82.0% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3620856 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.71 | 37.0 | 3.15e-01 | 76.4% | 31.0% |
| 3537229 | 310.3.1.21 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HNOB | 0.71 | 37.0 | 4.06e-01 | 76.4% | 60.0% |
| 3718955 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 46.0 | 5.18e-01 | 88.6% | 100.0% |
| 3609886 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.61 | 47.0 | 5.11e-01 | 90.2% | 99.0% |
| 1385054 | 2484.1.1.61 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 | 0.61 | 31.0 | 2.80e-01 | 89.4% | 34.1% |
| 3619535 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.60 | 44.0 | 4.61e-01 | 82.9% | 83.2% |
| 4060458 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.60 | 35.0 | 4.21e-01 | 81.3% | 88.7% |
| 3931929 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.60 | 35.0 | 2.97e-01 | 76.4% | 34.3% |
| 4458779 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.59 | 36.0 | 4.10e-01 | 81.3% | 79.8% |
| 3394912 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 34.0 | 3.99e-01 | 79.7% | 81.2% |
| 4936933 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 33.0 | 3.90e-01 | 78.9% | 81.2% |
| 3284477 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.58 | 35.0 | 4.10e-01 | 82.9% | 87.1% |
| 4952402 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 33.0 | 3.98e-01 | 78.9% | 87.5% |
| 3633027 | 304.57.1.2 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › Pop8 | 0.57 | 41.0 | 4.16e-01 | 82.9% | 75.8% |
| None | — | 0.57 | 40.0 | 2.82e-01 | 86.2% | 24.1% | |
| 3710418 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.56 | 40.0 | 2.82e-01 | 87.8% | 23.7% |
| 3933395 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.56 | 33.0 | 3.86e-01 | 82.9% | 83.5% |
| 4578845 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 38.0 | 4.19e-01 | 79.7% | 86.7% |
| 5001401 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.56 | 33.0 | 3.79e-01 | 82.9% | 82.4% |
| 3540649 | 11.1.1.789 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › KIAA1549 | 0.56 | 44.0 | 4.52e-01 | 84.6% | 86.7% |
| 4337362 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.56 | 38.0 | 4.18e-01 | 86.2% | 87.0% |
| 3653904 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 33.0 | 3.93e-01 | 80.5% | 90.0% |
| 4467967 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.55 | 37.0 | 2.77e-01 | 85.4% | 28.1% |
| 3164917 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.55 | 32.0 | 3.84e-01 | 82.9% | 87.5% |
| 4957999 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.55 | 33.0 | 3.65e-01 | 82.9% | 75.8% |
| 4993856 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 29.0 | 3.09e-01 | 76.4% | 57.1% |
| 4612662 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 32.0 | 3.64e-01 | 81.3% | 76.3% |
| 4993583 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 28.0 | 2.84e-01 | 75.6% | 46.7% |
| 4181826 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.54 | 32.0 | 3.48e-01 | 81.3% | 71.0% |
| 3637901 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 37.0 | 3.94e-01 | 82.1% | 81.9% |
| 4618987 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 28.0 | 2.79e-01 | 76.4% | 45.6% |
| 4151399 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.54 | 31.0 | 3.69e-01 | 79.7% | 86.3% |
| 3225950 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.53 | 31.0 | 3.21e-01 | 78.9% | 59.2% |
| 3907396 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.53 | 37.0 | 4.06e-01 | 79.7% | 89.0% |
| 3597631 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 43.0 | 3.46e-01 | 87.8% | 60.8% |
| 4205431 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.53 | 31.0 | 3.49e-01 | 81.3% | 74.7% |
| 4401827 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.53 | 31.0 | 3.56e-01 | 81.3% | 78.9% |
| 3962952 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.53 | 31.0 | 3.44e-01 | 79.7% | 72.0% |
| 4937786 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.53 | 32.0 | 3.51e-01 | 79.7% | 74.0% |
| 3510650 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.53 | 31.0 | 3.42e-01 | 81.3% | 71.7% |
| 3642268 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.52 | 40.0 | 4.06e-01 | 84.6% | 82.5% |
| 4319369 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.52 | 30.0 | 3.44e-01 | 78.9% | 76.7% |
| 5025196 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.52 | 30.0 | 3.56e-01 | 82.9% | 86.3% |
| 2886368 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.52 | 35.0 | 3.82e-01 | 91.9% | 83.2% |
| 3992985 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 30.0 | 3.50e-01 | 77.2% | 81.2% |
| 3575538 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.52 | 31.0 | 3.25e-01 | 78.9% | 64.5% |
| 4941725 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.51 | 31.0 | 3.41e-01 | 82.1% | 74.0% |
| 4074612 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.51 | 30.0 | 3.43e-01 | 81.3% | 76.8% |
| 4065918 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.51 | 29.0 | 3.36e-01 | 78.9% | 76.7% |
| 3660460 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 32.0 | 3.66e-01 | 82.9% | 90.6% |
| 3191368 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 39.0 | 3.94e-01 | 85.4% | 81.6% |
| 3827561 | 304.8.1.106 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Saccharop_dh_N | 0.50 | 31.0 | 3.38e-01 | 82.9% | 75.0% |
D2
medium
residues 95-165
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xi9A03 | 1.10.150.480 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 50.0 | 4.51e-01 | 88.7% | 87.1% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.63 | 54.0 | 4.49e-01 | 100.0% | 87.3% |
| 3ei3A04 | 1.10.150.910 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 43.0 | 4.05e-01 | 100.0% | 64.7% |
| 1kn1B00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.56 | 46.0 | 3.63e-01 | 94.4% | 67.1% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.56 | 43.0 | 3.48e-01 | 84.5% | 60.3% |
| 3di5A00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.54 | 46.0 | 3.73e-01 | 100.0% | 87.9% |
| 2fh0A00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.54 | 35.0 | 3.42e-01 | 93.0% | 58.0% |
| 3pmcA00 | 1.10.490.70 | Mainly Alpha › Orthogonal Bundle › Globin-like › Histidine kinase N-terminal domain | 0.53 | 44.0 | 3.71e-01 | 97.2% | 73.5% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.53 | 42.0 | 4.31e-01 | 100.0% | 90.9% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 37.0 | 3.54e-01 | 94.4% | 65.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 169889 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.68 | 60.0 | 5.14e-01 | 100.0% | 62.3% |
| 3960310 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.56 | 41.0 | 4.19e-01 | 94.4% | 78.6% |
| 3624355 | 109.40.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Hira | 0.56 | 40.0 | 3.23e-01 | 74.6% | 53.3% |
| 5077319 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.55 | 38.0 | 2.88e-01 | 100.0% | 27.4% |
| 3795092 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.54 | 37.0 | 2.99e-01 | 71.8% | 71.9% |
| 3257900 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.53 | 40.0 | 3.56e-01 | 84.5% | 89.1% |
| 3438341 | 611.8.1.2 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › Rx_N | 0.53 | 46.0 | 3.67e-01 | 100.0% | 64.7% |
| 3250971 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.52 | 36.0 | 3.30e-01 | 73.2% | 75.0% |
| 3617130 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.52 | 33.0 | 3.04e-01 | 78.9% | 48.4% |
| 3721449 | 7076.1.1.0 ↗ | 0.51 | 45.0 | 4.27e-01 | 98.6% | 98.8% | |
| 3734056 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 43.0 | 2.63e-01 | 94.4% | 75.3% |