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NC_021799.1__YP_008241792.1__Phi19-1_gp99__00099

Bact-Vir

NC_021799.1__YP_008241792.1__Phi19-1_gp99__00099

Identity

Accession:
NC_021799 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Assiduviridae› Cellubavirus› Cellulophaga_phage_phi19:1

TaxID: 1327970

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-87
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 52.0 4.73e-01 91.7% 68.7%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.33e-01 97.9% 62.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.27e-01 97.9% 57.5%
4b9wA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 48.0 3.84e-01 91.7% 75.0%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.61 51.0 3.77e-01 91.7% 44.5%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.57 46.0 3.04e-01 89.6% 22.1%
2xq0A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.57 41.0 2.92e-01 83.3% 95.5%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.56 47.0 3.08e-01 100.0% 90.0%
1jhdA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.55 48.0 3.20e-01 100.0% 68.4%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 3.43e-01 85.4% 98.8%
2y3vD00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.51 43.0 3.10e-01 100.0% 83.1%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.49e-01 91.7% 24.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4185009 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 52.0 4.77e-01 87.5% 70.8%
4554867 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 51.0 4.69e-01 91.7% 70.8%
3614175 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 52.0 3.98e-01 93.8% 40.0%
3965594 1.1.13.53 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 0.61 51.0 4.18e-01 97.9% 82.1%
3393319 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 50.0 3.93e-01 97.9% 43.6%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 46.0 3.79e-01 91.7% 45.3%
3241817 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.42e-01 91.7% 71.7%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 47.0 3.93e-01 89.6% 50.6%
3626456 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.58 42.0 2.88e-01 83.3% 88.8%
1688257 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.54 40.0 2.87e-01 85.4% 70.6%
3749245 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.53 42.0 3.10e-01 89.6% 36.9%
4483827 101.1.12.3 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.52 44.0 3.17e-01 100.0% 82.6%