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NC_021802.1__YP_008241956.1__Phi10-1_gp037__00037
Bact-VirNC_021802.1__YP_008241956.1__Phi10-1_gp037__00037
Identity
- Accession:
- NC_021802 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Assiduviridae›
Cebadecemvirus›
Cellulophaga_phage_phi10:1
TaxID: 1327981
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-72
D2
medium
residues 104-158
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8amqA02 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.66 | 54.0 | 3.36e-01 | 96.4% | 18.0% |
| 1sf8G00 | 1.20.120.790 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Heat shock protein 90, C-terminal domain | 0.65 | 54.0 | 4.27e-01 | 96.4% | 71.1% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 42.0 | 4.12e-01 | 72.7% | 61.3% |
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.61 | 46.0 | 3.72e-01 | 89.1% | 80.8% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.59 | 41.0 | 3.52e-01 | 76.4% | 43.2% |
| 1t5jA00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.53 | 41.0 | 2.67e-01 | 92.7% | 49.5% |
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 43.0 | 3.04e-01 | 100.0% | 91.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4042958 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.82 | 53.0 | 4.33e-01 | 70.9% | 37.9% |
| 3705683 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.81 | 54.0 | 4.36e-01 | 76.4% | 38.0% |
| 1548122 | 601.43.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Biofilm formation modulator YmoB › Biofilm formation modulator YmoB › YbaJ | 0.77 | 62.0 | 4.81e-01 | 89.1% | 50.8% |
| 3704373 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 55.0 | 4.17e-01 | 78.2% | 60.0% |
| 3614039 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.69 | 51.0 | 2.87e-01 | 78.2% | 20.7% |
| 3776468 | 2006.1.2.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases | 0.67 | 57.0 | 3.90e-01 | 96.4% | 86.0% |
| 3634546 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.66 | 49.0 | 4.53e-01 | 83.6% | 77.3% |
| 4952394 | 187.1.1.2 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_9 | 0.65 | 54.0 | 4.67e-01 | 96.4% | 66.7% |
| 3279501 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.61 | 48.0 | 3.46e-01 | 92.7% | 84.3% |
| 3446783 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 49.0 | 4.40e-01 | 92.7% | 77.5% |