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NC_021803.1__YP_008242062.1__Phi13-2_gp037__00037

Bact-Vir

NC_021803.1__YP_008242062.1__Phi13-2_gp037__00037

Identity

Accession:
NC_021803 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pachyviridae› Baltivirus› Cellulophaga_phage_phi13:2

TaxID: 1328030

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8amzO01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 47.0 3.02e-01 80.6% 55.6%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.08e-01 74.6% 59.4%
4e70A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.49e-01 77.6% 76.2%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.53e-01 79.1% 78.7%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.34e-01 77.6% 85.9%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 37.0 3.10e-01 85.1% 71.6%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 41.0 2.64e-01 95.5% 35.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3694109 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.56 42.0 3.57e-01 83.6% 76.7%
4978526 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.70e-01 76.1% 82.4%
4980261 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.39e-01 77.6% 89.5%
3610270 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 44.0 2.79e-01 97.0% 21.0%
4386508 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 39.0 3.15e-01 82.1% 72.5%
3602448 192.8.1.449 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF7343 0.52 37.0 2.68e-01 76.1% 44.2%
3706057 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.51 43.0 3.48e-01 100.0% 68.3%
3453675 101.1.2.304 ↗ alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.51 42.0 3.66e-01 98.5% 65.2%