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NC_021803.1__YP_008242102.1__Phi13-2_gp077__00077
Bact-VirNC_021803.1__YP_008242102.1__Phi13-2_gp077__00077
Identity
- Accession:
- NC_021803 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Taxonomy
TaxID: 1328030
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-66
Domain cluster:
rep: IMGVR_UViG_2904991991_000001-2904991991-2904995995__D8-66
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.70 | 57.0 | 5.38e-01 | 90.0% | 97.3% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 56.0 | 3.56e-01 | 96.7% | 51.5% |
| 5c98B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.67 | 46.0 | 3.58e-01 | 71.7% | 70.5% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.66 | 53.0 | 4.96e-01 | 90.0% | 88.2% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.66 | 54.0 | 5.14e-01 | 93.3% | 77.5% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 57.0 | 4.98e-01 | 98.3% | 84.8% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 55.0 | 4.39e-01 | 95.0% | 66.9% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 54.0 | 3.48e-01 | 96.7% | 64.4% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.64 | 53.0 | 4.45e-01 | 93.3% | 99.1% |
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.64 | 52.0 | 4.86e-01 | 91.7% | 89.5% |
| 5cmlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 49.0 | 3.29e-01 | 85.0% | 40.0% |
| 3kihC01 | 2.20.25.510 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 36.0 | 4.19e-01 | 70.0% | 94.1% |
| 2aj7A00 | 2.30.290.10 | Mainly Beta › Roll › BH3618-like › BH3618-like | 0.63 | 52.0 | 3.90e-01 | 93.3% | 79.0% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.63 | 53.0 | 4.97e-01 | 96.7% | 75.3% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 50.0 | 4.10e-01 | 88.3% | 64.0% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.94e-01 | 86.7% | 86.4% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.62 | 43.0 | 2.69e-01 | 71.7% | 34.2% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.62 | 46.0 | 3.80e-01 | 83.3% | 61.0% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 3.94e-01 | 75.0% | 66.3% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 47.0 | 4.35e-01 | 88.3% | 87.8% |
| 3oc4B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 40.0 | 2.91e-01 | 70.0% | 47.3% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.60 | 51.0 | 3.68e-01 | 98.3% | 83.5% |
| 3frnA03 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 41.0 | 4.42e-01 | 86.7% | 86.3% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 49.0 | 4.02e-01 | 98.3% | 54.4% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 47.0 | 4.60e-01 | 86.7% | 100.0% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 48.0 | 3.92e-01 | 98.3% | 51.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 50.0 | 4.62e-01 | 96.7% | 78.5% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 47.0 | 4.62e-01 | 96.7% | 82.4% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.58 | 45.0 | 3.73e-01 | 95.0% | 46.9% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 44.0 | 4.05e-01 | 85.0% | 70.0% |
| 2bc0A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 39.0 | 2.71e-01 | 71.7% | 47.0% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 4.63e-01 | 93.3% | 96.7% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 49.0 | 4.54e-01 | 96.7% | 92.0% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 4.40e-01 | 90.0% | 89.2% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 48.0 | 4.84e-01 | 96.7% | 100.0% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.57 | 42.0 | 4.32e-01 | 91.7% | 84.7% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 45.0 | 4.43e-01 | 95.0% | 84.8% |
| 3kifD00 | 2.20.25.650 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like | 0.56 | 42.0 | 3.70e-01 | 83.3% | 84.6% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 45.0 | 4.33e-01 | 91.7% | 88.2% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 4.06e-01 | 91.7% | 80.0% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 38.0 | 3.81e-01 | 76.7% | 90.8% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.54 | 47.0 | 3.36e-01 | 96.7% | 48.9% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 45.0 | 3.88e-01 | 96.7% | 69.6% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 36.0 | 3.90e-01 | 71.7% | 97.9% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 2.53e-01 | 78.3% | 20.7% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 39.0 | 3.54e-01 | 83.3% | 90.0% |
| 3d31A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 4.13e-01 | 76.7% | 97.8% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 4.18e-01 | 90.0% | 91.2% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.51 | 40.0 | 4.01e-01 | 95.0% | 90.0% |
| 1wi5A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 34.0 | 3.29e-01 | 73.3% | 97.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963446 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 69.0 | 6.69e-01 | 93.3% | 84.6% |
| 4348606 | 4.1.1.440 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27165 | 0.75 | 65.0 | 6.40e-01 | 96.7% | 89.2% |
| 4994957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 61.0 | 6.40e-01 | 98.3% | 98.2% |
| 4030943 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.72 | 57.0 | 5.19e-01 | 86.7% | 86.1% |
| 3249804 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.70 | 55.0 | 3.88e-01 | 88.3% | 30.8% |
| 4103373 | 375.1.1.47 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC | 0.69 | 55.0 | 5.67e-01 | 95.0% | 96.4% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 5.45e-01 | 91.7% | 88.3% |
| 4930563 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.68 | 52.0 | 5.05e-01 | 86.7% | 91.4% |
| 5013892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 53.0 | 5.47e-01 | 93.3% | 94.5% |
| 4984041 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.67 | 52.0 | 4.88e-01 | 86.7% | 90.7% |
| 3436022 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.66 | 48.0 | 5.04e-01 | 90.0% | 85.5% |
| 4585317 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.66 | 49.0 | 5.06e-01 | 90.0% | 85.5% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.65 | 48.0 | 5.02e-01 | 91.7% | 87.3% |
| 3590784 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.65 | 49.0 | 4.81e-01 | 93.3% | 73.8% |
| 4583465 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.65 | 47.0 | 4.99e-01 | 90.0% | 92.0% |
| 4169657 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.65 | 47.0 | 5.00e-01 | 91.7% | 94.0% |
| 4534931 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 47.0 | 4.43e-01 | 90.0% | 62.7% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.64 | 55.0 | 4.65e-01 | 98.3% | 61.9% |
| 4252943 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 46.0 | 4.95e-01 | 88.3% | 92.0% |
| 3476478 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 50.0 | 4.30e-01 | 93.3% | 53.7% |
| 4432330 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 46.0 | 4.94e-01 | 91.7% | 94.0% |
| 4385345 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 46.0 | 4.92e-01 | 88.3% | 92.0% |
| 4058919 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 46.0 | 4.91e-01 | 88.3% | 92.0% |
| 4170351 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.63 | 46.0 | 4.33e-01 | 91.7% | 62.7% |
| 4053957 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.63 | 46.0 | 4.92e-01 | 93.3% | 96.0% |
| 4668201 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 44.0 | 4.74e-01 | 90.0% | 92.0% |
| 4336500 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 47.0 | 4.92e-01 | 96.7% | 92.7% |
| 3305577 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 47.0 | 4.91e-01 | 95.0% | 92.7% |
| 3519125 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.91e-01 | 90.0% | 98.0% |
| 4010317 | 4.1.1.395 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27398 | 0.61 | 48.0 | 4.73e-01 | 95.0% | 81.5% |
| 3415741 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 44.0 | 3.39e-01 | 85.0% | 45.5% |
| 4380184 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.57 | 45.0 | 4.08e-01 | 91.7% | 98.9% |
| 3604145 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.72e-01 | 95.0% | 91.7% |
| 3490689 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 47.0 | 4.53e-01 | 93.3% | 87.1% |
| 3399557 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.53e-01 | 93.3% | 88.6% |
| 3937635 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.56 | 46.0 | 3.36e-01 | 96.7% | 53.7% |
| 1482194 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.55 | 40.0 | 4.06e-01 | 91.7% | 80.0% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.38e-01 | 98.3% | 77.3% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.55 | 45.0 | 4.23e-01 | 98.3% | 72.5% |
| 4020558 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 4.42e-01 | 95.0% | 96.9% |
| 3470815 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 47.0 | 4.46e-01 | 96.7% | 97.1% |
| 3926701 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.54 | 44.0 | 4.32e-01 | 93.3% | 88.2% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 39.0 | 3.66e-01 | 80.0% | 87.5% |
| 4403111 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.53 | 46.0 | 3.99e-01 | 98.3% | 65.3% |
| 3415161 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 43.0 | 2.83e-01 | 93.3% | 32.0% |
| 3268760 | 220.4.1.6 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › Peptidase_M8 | 0.52 | 40.0 | 3.85e-01 | 85.0% | 87.1% |
| 3539094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 4.05e-01 | 100.0% | 92.5% |
| 4656461 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 42.0 | 4.26e-01 | 93.3% | 98.3% |
| 4557982 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.51 | 43.0 | 3.73e-01 | 95.0% | 96.8% |
| 5069341 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.50 | 37.0 | 4.02e-01 | 86.7% | 96.0% |
D2
medium
residues 83-184
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ipqB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.76 | 55.0 | 3.95e-01 | 76.5% | 46.6% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.70 | 46.0 | 5.47e-01 | 81.4% | 100.0% |
| 6p6jB01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.67 | 49.0 | 3.51e-01 | 77.5% | 43.6% |
| 2itbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 58.0 | 4.66e-01 | 95.1% | 89.9% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 47.0 | 3.79e-01 | 72.5% | 87.0% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 46.0 | 5.21e-01 | 83.3% | 94.9% |
| 2pusA04 | 6.10.140.300 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 41.0 | 4.06e-01 | 72.5% | 59.3% |
| 1to9A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.64 | 51.0 | 4.02e-01 | 87.3% | 71.6% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.62 | 46.0 | 4.04e-01 | 78.4% | 53.9% |
| 7wivA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 45.0 | 3.30e-01 | 79.4% | 45.6% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 35.0 | 3.60e-01 | 74.5% | 59.6% |
| 3rmgA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 48.0 | 3.55e-01 | 97.1% | 71.9% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 48.0 | 3.76e-01 | 100.0% | 94.1% |
| 1xlyA00 | 1.20.200.20 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › She2 domain | 0.55 | 40.0 | 3.12e-01 | 76.5% | 92.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4283760 | 1203.1.2.7 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › GNVR | 0.74 | 57.0 | 5.09e-01 | 80.4% | 65.0% |
| 3948099 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.71 | 54.0 | 4.42e-01 | 78.4% | 63.1% |
| 3722421 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.66 | 46.0 | 4.21e-01 | 72.5% | 77.1% |
| 3270828 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.65 | 47.0 | 3.28e-01 | 75.5% | 74.8% |
| 3571433 | 3939.1.1.220 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › KIF21A | 0.61 | 45.0 | 3.82e-01 | 75.5% | 86.3% |
| 5056871 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.60 | 41.0 | 2.91e-01 | 70.6% | 91.3% |
| 3362472 | 605.1.1.132 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 | 0.59 | 43.0 | 4.25e-01 | 75.5% | 76.4% |
| 3819179 | 632.7.1.62 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › DUF641 | 0.58 | 42.0 | 3.78e-01 | 75.5% | 60.0% |
| 3294587 | 1134.1.2.2 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain › DUF641 | 0.57 | 41.0 | 3.80e-01 | 75.5% | 64.6% |
| 5057918 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 45.0 | 3.30e-01 | 89.2% | 58.7% |
| 3681806 | 5027.1.1.9 ↗ | extended segments › Preprotein translocase SecE subunit › Preprotein translocase SecE subunit › Preprotein translocase SecE subunit › DUF641 | 0.54 | 39.0 | 3.75e-01 | 75.5% | 70.8% |
| 3452483 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 47.0 | 3.83e-01 | 93.1% | 78.9% |
| 4997871 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.51 | 39.0 | 3.87e-01 | 81.4% | 78.2% |