←Back to structures
NC_021806.1__YP_008242292.2__N356_gp065__00065
Bact-VirNC_021806.1__YP_008242292.2__N356_gp065__00065
Identity
- Accession:
- NC_021806 ↗
- Kingdom:
- phage
Quality
61.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Crassvirales›
Steigviridae›
Akihdevirus›
Cellulophaga_phage_phi14:2
TaxID: 1327990
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-136
D2
high
residues 151-239
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pvjA01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 45.0 | 3.39e-01 | 100.0% | 72.9% |
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 45.0 | 3.54e-01 | 100.0% | 84.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036301 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.67 | 31.0 | 4.56e-01 | 74.2% | 100.0% |
| 5043002 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.63 | 32.0 | 4.42e-01 | 79.8% | 100.0% |
| 3841843 | 386.1.1.64 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_12 | 0.62 | 32.0 | 3.86e-01 | 76.4% | 76.4% |
| 4291435 | 4983.1.1.0 ↗ | alpha superhelices › Indoleamine 2,3-dioxygenase N-terminal subdomain › Indoleamine 2,3-dioxygenase N-terminal subdomain › Indoleamine 2,3-dioxygenase N-terminal subdomain | 0.60 | 43.0 | 3.60e-01 | 75.3% | 77.5% |
| 4987339 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 31.0 | 3.06e-01 | 100.0% | 45.3% |
| 3936215 | 386.1.1.242 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_16 | 0.58 | 36.0 | 4.08e-01 | 76.4% | 86.2% |
| 3716634 | 109.4.1.1357 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_16 | 0.54 | 43.0 | 2.90e-01 | 84.3% | 47.2% |
| 3475471 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.54 | 41.0 | 3.58e-01 | 83.1% | 82.1% |
| 3882796 | 1021.1.1.2 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD | 0.52 | 42.0 | 4.33e-01 | 98.9% | 92.9% |
| 3314358 | 1021.1.1.2 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD | 0.52 | 38.0 | 3.92e-01 | 94.4% | 82.4% |
| 3693747 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.51 | 39.0 | 4.00e-01 | 94.4% | 84.7% |
| 3889228 | 386.1.1.66 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Spt46 | 0.51 | 33.0 | 3.55e-01 | 93.3% | 75.6% |
| 5050695 | 3352.1.1.15 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87 | 0.51 | 42.0 | 2.89e-01 | 97.8% | 64.0% |
D3
high
residues 309-387
D4
high
residues 400-503
D5
high
residues 515-575