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NC_022064.1__YP_008409983.1__REPROBATE_62__00062
Bact-VirNC_022064.1__YP_008409983.1__REPROBATE_62__00062
Identity
- Accession:
- NC_022064 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 1340828
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 56-114
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h09A04 | 4.10.1240.40 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.65 | 31.0 | 2.88e-01 | 71.2% | 36.1% |
| 3d9xA01 | 6.20.50.100 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.59 | 30.0 | 3.25e-01 | 76.3% | 54.0% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.52 | 43.0 | 2.76e-01 | 93.2% | 33.8% |
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.51 | 33.0 | 3.45e-01 | 78.0% | 73.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4583578 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.65 | 33.0 | 3.60e-01 | 76.3% | 56.0% |
| 4321082 | 389.1.1.103 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF30000 | 0.64 | 34.0 | 3.74e-01 | 76.3% | 62.2% |
| 3803894 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.63 | 32.0 | 2.97e-01 | 74.6% | 36.0% |
| 3498024 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.62 | 35.0 | 3.62e-01 | 88.1% | 54.5% |
| 3289468 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 35.0 | 3.32e-01 | 72.9% | 47.1% |
| 4470870 | 387.2.1.0 ↗ | few secondary structure elements › omega toxin-like | 0.58 | 36.0 | 4.03e-01 | 71.2% | 92.5% |
| 3582223 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.58 | 32.0 | 3.67e-01 | 74.6% | 75.0% |
| 3932434 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.56 | 30.0 | 3.31e-01 | 72.9% | 60.5% |
| 4817079 | 327.11.2.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_8 | 0.55 | 32.0 | 2.88e-01 | 79.7% | 39.0% |
| 5039686 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.55 | 45.0 | 3.17e-01 | 100.0% | 57.6% |
| 3501741 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.54 | 32.0 | 3.24e-01 | 78.0% | 56.7% |
| 3568886 | 2492.1.1.29 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC4_like | 0.54 | 44.0 | 3.05e-01 | 93.2% | 55.3% |
| 4314610 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.53 | 37.0 | 2.68e-01 | 76.3% | 27.2% |
| 3502807 | 389.1.1.95 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_Mua-3 | 0.52 | 30.0 | 3.22e-01 | 79.7% | 62.0% |
| 4532002 | 387.2.1.0 ↗ | few secondary structure elements › omega toxin-like | 0.52 | 33.0 | 3.67e-01 | 76.3% | 100.0% |
| 4048312 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.51 | 35.0 | 2.53e-01 | 76.3% | 39.7% |
| 5018209 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 34.0 | 3.38e-01 | 76.3% | 68.3% |