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NC_022323.1__YP_008530302.1__P766_gp057__00057
Bact-VirNC_022323.1__YP_008530302.1__P766_gp057__00057
Identity
- Accession:
- NC_022323 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 1327956
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-89
Domain cluster:
rep: KR534323.1__AKO61129.1__X__00228__D8-79
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3au2A04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.60 | 45.0 | 4.74e-01 | 97.4% | 95.4% |
| 4qnyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 44.0 | 3.78e-01 | 78.9% | 83.2% |
| 1tkeA03 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.59 | 31.0 | 3.51e-01 | 100.0% | 65.5% |
| 4uyiA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.52 | 40.0 | 3.42e-01 | 84.2% | 63.8% |
| 6mfcA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 40.0 | 3.12e-01 | 89.5% | 59.0% |
| 2nykA01 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.50 | 40.0 | 3.32e-01 | 90.8% | 52.0% |
| 4c12A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.50 | 42.0 | 3.12e-01 | 100.0% | 37.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3354127 | 502.1.1.0 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain | 0.59 | 35.0 | 3.93e-01 | 76.3% | 76.7% |
| 4972821 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.53 | 38.0 | 3.36e-01 | 84.2% | 49.2% |
| 4087530 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.52 | 37.0 | 3.80e-01 | 96.1% | 77.3% |
D2
high
residues 97-179
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.68 | 58.0 | 5.29e-01 | 96.4% | 83.2% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.66 | 45.0 | 4.61e-01 | 71.1% | 90.2% |
| 2o8mB01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 45.0 | 4.94e-01 | 86.7% | 92.4% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 51.0 | 5.01e-01 | 88.0% | 89.0% |
| 1n26A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 53.0 | 4.88e-01 | 91.6% | 84.1% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 51.0 | 4.53e-01 | 89.2% | 81.6% |
| 2q2eB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.63 | 50.0 | 3.76e-01 | 89.2% | 71.5% |
| 4hd5A01 | 2.60.40.3760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 49.0 | 4.76e-01 | 88.0% | 91.8% |
| 3o8eD02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.63 | 43.0 | 4.89e-01 | 100.0% | 98.3% |
| 5i0qB02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 44.0 | 4.92e-01 | 100.0% | 98.4% |
| 6v06A04 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 43.0 | 4.86e-01 | 100.0% | 98.3% |
| 1n67A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 53.0 | 4.60e-01 | 100.0% | 75.2% |
| 1r17B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 55.0 | 4.46e-01 | 100.0% | 87.7% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 4.59e-01 | 72.3% | 86.1% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 51.0 | 4.49e-01 | 94.0% | 91.6% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 54.0 | 4.50e-01 | 100.0% | 92.8% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 54.0 | 4.16e-01 | 100.0% | 77.3% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.62 | 49.0 | 4.22e-01 | 86.7% | 64.7% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 48.0 | 4.48e-01 | 86.7% | 84.1% |
| 2dm2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 49.0 | 4.49e-01 | 88.0% | 75.5% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.61 | 44.0 | 4.41e-01 | 75.9% | 86.9% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.61 | 52.0 | 4.33e-01 | 95.2% | 91.2% |
| 1elvA03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.61 | 45.0 | 4.90e-01 | 100.0% | 97.0% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 48.0 | 4.73e-01 | 88.0% | 91.1% |
| 2wiiC02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.61 | 43.0 | 4.78e-01 | 100.0% | 100.0% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.61 | 44.0 | 4.08e-01 | 77.1% | 85.2% |
| 5c86A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 49.0 | 4.63e-01 | 89.2% | 86.1% |
| 7z47G01 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 41.0 | 4.40e-01 | 80.7% | 85.7% |
| 2j8hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.64e-01 | 89.2% | 83.5% |
| 4ofyD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 4.58e-01 | 88.0% | 86.5% |
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 52.0 | 4.18e-01 | 100.0% | 65.3% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 4.30e-01 | 89.2% | 78.0% |
| 3erbA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 40.0 | 4.54e-01 | 100.0% | 100.0% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.18e-01 | 84.3% | 91.1% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 53.0 | 3.94e-01 | 100.0% | 52.3% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.59 | 48.0 | 4.05e-01 | 88.0% | 86.2% |
| 4m9fA00 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 42.0 | 3.17e-01 | 80.7% | 31.0% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.59 | 49.0 | 4.09e-01 | 94.0% | 83.9% |
| 2g7iA02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.58 | 43.0 | 4.69e-01 | 100.0% | 100.0% |
| 2kkqA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.23e-01 | 89.2% | 71.6% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 40.0 | 4.42e-01 | 81.9% | 93.8% |
| 3irzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.81e-01 | 100.0% | 96.0% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 40.0 | 3.84e-01 | 74.7% | 75.3% |
| 1olrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.56 | 43.0 | 3.22e-01 | 83.1% | 93.7% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 48.0 | 4.04e-01 | 95.2% | 85.5% |
| 1h6qA00 | 2.170.150.10 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A | 0.55 | 44.0 | 3.58e-01 | 88.0% | 98.8% |
| 3b43A06 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.29e-01 | 90.4% | 85.3% |
| 3axbA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.55 | 45.0 | 3.49e-01 | 88.0% | 67.0% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 42.0 | 4.05e-01 | 85.5% | 91.0% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.54 | 40.0 | 3.86e-01 | 83.1% | 68.4% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 42.0 | 4.36e-01 | 89.2% | 96.2% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.29e-01 | 71.1% | 96.7% |
| 7kbrC01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 44.0 | 3.83e-01 | 92.8% | 60.4% |
| 1nh8A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.87e-01 | 72.3% | 88.1% |
| 3kewA01 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 41.0 | 4.13e-01 | 88.0% | 98.8% |
| 1g2bA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 33.0 | 3.64e-01 | 89.2% | 83.9% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 40.0 | 3.53e-01 | 89.2% | 99.3% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3894334 | 11.1.1.134 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL12p40_C | 0.73 | 61.0 | 5.63e-01 | 90.4% | 84.8% |
| 3730028 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 55.0 | 5.36e-01 | 86.7% | 84.4% |
| 3994715 | 11.1.1.430 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP-delta | 0.67 | 51.0 | 4.99e-01 | 81.9% | 88.9% |
| 4952584 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.67 | 53.0 | 5.42e-01 | 85.5% | 96.2% |
| 3555753 | 11.1.1.430 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP-delta | 0.66 | 52.0 | 4.41e-01 | 86.7% | 73.8% |
| 3618870 | 11.1.1.430 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP-delta | 0.66 | 52.0 | 4.36e-01 | 86.7% | 73.1% |
| 3471892 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.66 | 50.0 | 5.38e-01 | 98.8% | 97.1% |
| 3402121 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.66 | 41.0 | 4.76e-01 | 97.6% | 94.5% |
| 3904587 | 11.1.1.1087 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_Hemicentin | 0.65 | 54.0 | 4.09e-01 | 94.0% | 91.9% |
| 3416041 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.63 | 41.0 | 4.80e-01 | 96.4% | 100.0% |
| 4027515 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 51.0 | 3.80e-01 | 89.2% | 77.7% |
| 4944077 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 51.0 | 4.75e-01 | 90.4% | 81.0% |
| 3967164 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.63 | 44.0 | 4.72e-01 | 72.3% | 100.0% |
| 3277614 | 319.1.1.16 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 | 0.63 | 43.0 | 4.58e-01 | 71.1% | 100.0% |
| 3201540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 3.89e-01 | 89.2% | 40.5% |
| 3283745 | 319.1.1.16 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 | 0.62 | 43.0 | 4.47e-01 | 71.1% | 93.3% |
| 3705413 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 50.0 | 4.83e-01 | 88.0% | 90.5% |
| 3928613 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.62 | 42.0 | 4.69e-01 | 100.0% | 96.7% |
| 3888943 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 50.0 | 4.85e-01 | 90.4% | 85.3% |
| 164156 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 49.0 | 4.49e-01 | 88.0% | 75.5% |
| 3543779 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.61 | 41.0 | 4.63e-01 | 98.8% | 96.7% |
| 3394335 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.61 | 50.0 | 3.96e-01 | 89.2% | 51.8% |
| 3841509 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 48.0 | 4.05e-01 | 86.7% | 56.6% |
| 2716407 | 4255.1.1.2 ↗ | few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › V-set | 0.61 | 43.0 | 4.36e-01 | 74.7% | 100.0% |
| 3916187 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 49.0 | 4.43e-01 | 88.0% | 72.2% |
| 3507849 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.61 | 49.0 | 3.77e-01 | 92.8% | 81.4% |
| 4621403 | 11.1.1.285 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RibLong | 0.61 | 48.0 | 4.34e-01 | 89.2% | 81.7% |
| 3573896 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.60 | 49.0 | 4.61e-01 | 89.2% | 86.0% |
| 4160582 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.60 | 43.0 | 3.74e-01 | 75.9% | 74.6% |
| 3483861 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.60 | 41.0 | 4.18e-01 | 71.1% | 100.0% |
| 3899366 | 389.1.1.93 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_CRD | 0.60 | 43.0 | 4.68e-01 | 100.0% | 98.5% |
| 3261083 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.37e-01 | 88.0% | 66.4% |
| 3566417 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 3.42e-01 | 89.2% | 32.8% |
| 3390825 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.59 | 42.0 | 4.63e-01 | 100.0% | 96.9% |
| 5036400 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 43.0 | 4.57e-01 | 100.0% | 97.1% |
| 3581737 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 46.0 | 4.28e-01 | 90.4% | 74.5% |
| 4522308 | 101.1.2.654 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA | 0.57 | 41.0 | 4.21e-01 | 75.9% | 91.3% |
| 3868327 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 45.0 | 3.83e-01 | 89.2% | 56.6% |
| 4995617 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.57 | 39.0 | 3.90e-01 | 73.5% | 100.0% |
| 3866684 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 45.0 | 2.92e-01 | 89.2% | 20.5% |
| 3764100 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 46.0 | 3.82e-01 | 94.0% | 73.1% |
| 3838931 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 42.0 | 4.43e-01 | 86.7% | 95.7% |
| 4992167 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.55 | 42.0 | 2.65e-01 | 84.3% | 30.0% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 43.0 | 4.26e-01 | 85.5% | 86.0% |
| 4990900 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 4.14e-01 | 89.2% | 88.0% |
| 3945667 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.54 | 43.0 | 3.17e-01 | 90.4% | 56.0% |
| 4996383 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 40.0 | 3.51e-01 | 88.0% | 100.0% |
| 3738408 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.95e-01 | 85.5% | 100.0% |
| 4959168 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 38.0 | 3.93e-01 | 85.5% | 100.0% |
D3
high
residues 235-283
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26097.1 best | Phage_Inh_N | 63.8 | 1.60e-17 | 100.0% | 90.2% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.75 | 56.0 | 4.75e-01 | 81.6% | 58.0% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 49.0 | 3.21e-01 | 73.5% | 75.5% |
| 3fynA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 51.0 | 3.57e-01 | 79.6% | 91.4% |
| 1iomA01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.65 | 48.0 | 3.10e-01 | 81.6% | 50.0% |
| 4c2mA06 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.64 | 51.0 | 3.64e-01 | 93.9% | 92.1% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 48.0 | 4.32e-01 | 81.6% | 85.9% |
| 1ks9A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 48.0 | 3.64e-01 | 83.7% | 47.2% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.63 | 47.0 | 4.50e-01 | 95.9% | 70.7% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 47.0 | 3.44e-01 | 79.6% | 45.5% |
| 2wtbA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 45.0 | 3.09e-01 | 75.5% | 97.2% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.21e-01 | 85.7% | 58.8% |
| 3p5jA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 45.0 | 3.10e-01 | 87.8% | 86.3% |
| 4xjxA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 44.0 | 2.87e-01 | 95.9% | 38.5% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 44.0 | 3.23e-01 | 87.8% | 65.0% |
| 3cf6E03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.53 | 46.0 | 3.42e-01 | 100.0% | 61.8% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.51 | 40.0 | 3.73e-01 | 98.0% | 68.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400463 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 54.0 | 4.35e-01 | 81.6% | 66.3% |
| 3876674 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 54.0 | 4.44e-01 | 83.7% | 52.2% |
| 201007 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.69 | 51.0 | 3.62e-01 | 79.6% | 95.9% |
| 5082325 | 3705.1.1.3 ↗ | alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Phage_holin_6_1 | 0.68 | 53.0 | 4.76e-01 | 85.7% | 80.0% |
| 3819480 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 48.0 | 3.39e-01 | 75.5% | 28.4% |
| 4954928 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.67 | 57.0 | 4.69e-01 | 100.0% | 100.0% |
| 4606658 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.65 | 57.0 | 4.21e-01 | 100.0% | 66.9% |
| 3491229 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 44.0 | 3.73e-01 | 73.5% | 57.6% |
| 4395671 | 2003.1.5.160 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase, Eco57I | 0.64 | 50.0 | 3.18e-01 | 87.8% | 37.3% |
| 3396670 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.63 | 50.0 | 4.19e-01 | 93.9% | 73.7% |
| 4622610 | 101.1.1.431 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CFEM | 0.59 | 45.0 | 4.07e-01 | 85.7% | 85.7% |
| 3235890 | 3913.1.1.1 ↗ | extended segments › Intraflagellar transport protein 52 C-terminal domain › Intraflagellar transport protein 52 C-terminal domain › Intraflagellar transport protein 52 C-terminal domain › Itf52_C | 0.58 | 43.0 | 4.13e-01 | 87.8% | 69.0% |
| 4386290 | 4002.1.1.4 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › DHQS_C | 0.57 | 46.0 | 3.07e-01 | 87.8% | 50.8% |
| 4961682 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.55 | 40.0 | 3.24e-01 | 83.7% | 57.0% |
| 3671578 | 2485.1.1.10 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA | 0.53 | 43.0 | 2.89e-01 | 87.8% | 42.7% |
| 3785234 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.53 | 41.0 | 3.64e-01 | 87.8% | 86.7% |