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NC_022749.1__YP_008766888.1__V416_gp24__00024
Bact-VirNC_022749.1__YP_008766888.1__V416_gp24__00024
Identity
- Accession:
- NC_022749 ↗
- Kingdom:
- phage
Quality
70.7
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-85
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01527.27 best | HTH_Tnp_1 | 59.6 | 4.00e-16 | 82.0% | 89.3% |
| PF13384.13 | HTH_23 | 27.4 | 3.20e-06 | 51.3% | 68.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 48.0 | 3.30e-01 | 71.8% | 20.3% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 51.0 | 4.74e-01 | 76.9% | 77.7% |
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 51.0 | 3.94e-01 | 84.6% | 72.0% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.59 | 43.0 | 3.64e-01 | 79.5% | 49.3% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 41.0 | 3.78e-01 | 74.4% | 98.1% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 38.0 | 3.58e-01 | 71.8% | 100.0% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.03e-01 | 71.8% | 60.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008641 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.71 | 53.0 | 5.22e-01 | 79.5% | 92.9% |
| 5043242 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.69 | 48.0 | 4.69e-01 | 71.8% | 100.0% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.66 | 54.0 | 5.09e-01 | 89.7% | 90.5% |
| 4470607 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.66 | 50.0 | 4.38e-01 | 80.8% | 73.0% |
| 5002577 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.64 | 55.0 | 4.83e-01 | 98.7% | 65.0% |
| 4683324 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.63 | 49.0 | 4.34e-01 | 82.1% | 75.5% |
| None | — | 0.63 | 46.0 | 4.16e-01 | 76.9% | 77.1% | |
| 4148347 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.58 | 44.0 | 4.06e-01 | 82.1% | 73.1% |
| None | — | 0.57 | 44.0 | 4.00e-01 | 84.6% | 70.9% |