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NC_022763.1__YP_008770367.1__Spock_143__00143
Bact-VirNC_022763.1__YP_008770367.1__Spock_143__00143
Identity
- Accession:
- NC_022763 ↗
- Kingdom:
- phage
Quality
87.0
mean pLDDT
Taxonomy
TaxID: 1406791
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-68
Domain cluster:
representative
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 58.0 | 6.52e-01 | 89.1% | 100.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 68.0 | 6.96e-01 | 98.4% | 96.7% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.80 | 59.0 | 5.25e-01 | 90.6% | 55.6% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.79 | 55.0 | 5.62e-01 | 82.8% | 74.6% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 51.0 | 5.75e-01 | 82.8% | 89.6% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 57.0 | 5.69e-01 | 89.1% | 74.6% |
| 1le8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 58.0 | 6.21e-01 | 93.8% | 98.1% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 60.0 | 5.91e-01 | 98.4% | 80.9% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 58.0 | 6.21e-01 | 98.4% | 98.1% |
| 2e19A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 52.0 | 5.88e-01 | 89.1% | 100.0% |
| 1uhsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 58.0 | 6.09e-01 | 92.2% | 100.0% |
| 1x2mA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 57.0 | 6.11e-01 | 96.9% | 98.1% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 57.0 | 5.60e-01 | 98.4% | 76.1% |
| 2o5iN07 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.74 | 54.0 | 4.41e-01 | 78.1% | 83.6% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 51.0 | 5.76e-01 | 85.9% | 100.0% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 5.30e-01 | 93.8% | 77.8% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 56.0 | 5.47e-01 | 100.0% | 77.1% |
| 2mw8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 58.0 | 5.74e-01 | 100.0% | 86.6% |
| 4fjqA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.71 | 53.0 | 3.28e-01 | 79.7% | 26.5% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 46.0 | 4.32e-01 | 85.9% | 55.1% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 43.0 | 4.77e-01 | 85.9% | 83.3% |
| 1akhB00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 61.0 | 5.71e-01 | 100.0% | 83.3% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 55.0 | 5.15e-01 | 95.3% | 70.7% |
| 1w36B05 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.68 | 60.0 | 3.89e-01 | 100.0% | 72.0% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 45.0 | 4.26e-01 | 70.3% | 65.4% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 42.0 | 4.89e-01 | 82.8% | 100.0% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 4.48e-01 | 87.5% | 61.3% |
| 4pswA03 | 1.10.10.390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 51.0 | 5.49e-01 | 92.2% | 98.1% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 4.51e-01 | 82.8% | 72.1% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 45.0 | 5.12e-01 | 81.2% | 100.0% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 47.0 | 4.99e-01 | 95.3% | 85.7% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 57.0 | 4.55e-01 | 100.0% | 86.5% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.65 | 48.0 | 4.54e-01 | 100.0% | 65.0% |
| 3e97A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 4.82e-01 | 87.5% | 91.0% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 57.0 | 3.99e-01 | 100.0% | 48.8% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.64 | 41.0 | 4.11e-01 | 79.7% | 64.6% |
| 2ffhA03 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.64 | 53.0 | 4.61e-01 | 98.4% | 60.0% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 42.0 | 4.05e-01 | 76.6% | 60.3% |
| 1kblA04 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.63 | 54.0 | 3.41e-01 | 98.4% | 19.0% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 4.65e-01 | 87.5% | 90.0% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 50.0 | 4.99e-01 | 98.4% | 85.3% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 47.0 | 4.67e-01 | 92.2% | 77.6% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.74e-01 | 93.8% | 79.1% |
| 4ch7A01 | 1.10.10.2890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 46.0 | 3.77e-01 | 90.6% | 43.1% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 49.0 | 4.85e-01 | 100.0% | 83.8% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 5.14e-01 | 95.3% | 91.5% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 4.68e-01 | 93.8% | 81.8% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.61 | 49.0 | 3.37e-01 | 87.5% | 72.6% |
| 1dqeA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.61 | 52.0 | 4.16e-01 | 100.0% | 75.2% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 51.0 | 3.77e-01 | 100.0% | 59.2% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 52.0 | 5.24e-01 | 95.3% | 100.0% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.59 | 50.0 | 4.46e-01 | 96.9% | 77.1% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 3.85e-01 | 90.6% | 48.1% |
| 3l0iA01 | 1.20.120.1520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 48.0 | 3.53e-01 | 92.2% | 33.0% |
| 2qe7G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.59 | 40.0 | 3.52e-01 | 71.9% | 53.6% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.58 | 39.0 | 3.48e-01 | 71.9% | 47.4% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 46.0 | 4.60e-01 | 87.5% | 90.9% |
| 1xwyA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 47.0 | 3.15e-01 | 90.6% | 26.2% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 48.0 | 4.26e-01 | 93.8% | 92.6% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 50.0 | 3.84e-01 | 96.9% | 43.8% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.58 | 40.0 | 3.51e-01 | 75.0% | 47.9% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.57 | 41.0 | 3.83e-01 | 76.6% | 65.0% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 39.0 | 4.07e-01 | 73.4% | 86.7% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.57 | 48.0 | 3.90e-01 | 92.2% | 81.0% |
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 40.0 | 3.94e-01 | 76.6% | 82.6% |
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 40.0 | 4.00e-01 | 79.7% | 83.6% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 47.0 | 3.72e-01 | 96.9% | 56.0% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 47.0 | 3.50e-01 | 96.9% | 53.0% |
| 4i5lB01 | 1.10.238.230 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.52 | 42.0 | 3.69e-01 | 90.6% | 61.0% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 42.0 | 3.69e-01 | 89.1% | 100.0% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3333472 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.84 | 67.0 | 6.33e-01 | 95.3% | 73.3% |
| 3798210 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 61.0 | 6.67e-01 | 82.8% | 100.0% |
| 3229130 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.81 | 60.0 | 6.55e-01 | 95.3% | 100.0% |
| 3994687 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.80 | 60.0 | 6.42e-01 | 92.2% | 94.5% |
| 3507787 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.80 | 59.0 | 6.52e-01 | 92.2% | 100.0% |
| 160865 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 59.0 | 5.52e-01 | 95.3% | 63.7% |
| 3323749 | 101.1.1.298 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7645 | 0.79 | 62.0 | 6.35e-01 | 95.3% | 90.0% |
| 4379527 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.79 | 59.0 | 5.31e-01 | 90.6% | 58.8% |
| 3932555 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 58.0 | 5.52e-01 | 89.1% | 66.7% |
| 3911740 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.79 | 62.0 | 6.60e-01 | 93.8% | 100.0% |
| 3495504 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 58.0 | 6.36e-01 | 89.1% | 100.0% |
| 5053307 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 68.0 | 6.99e-01 | 93.8% | 100.0% |
| 3652032 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 63.0 | 6.01e-01 | 98.4% | 74.7% |
| 3889817 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 63.0 | 5.85e-01 | 98.4% | 70.0% |
| 4275568 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 62.0 | 6.01e-01 | 95.3% | 77.1% |
| 3628186 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.79 | 63.0 | 5.04e-01 | 100.0% | 43.8% |
| 3353944 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.78 | 59.0 | 4.09e-01 | 89.1% | 24.8% |
| 3844546 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 61.0 | 5.94e-01 | 95.3% | 77.1% |
| 3445817 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.78 | 53.0 | 6.10e-01 | 82.8% | 100.0% |
| 5046018 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 55.0 | 5.14e-01 | 84.4% | 60.0% |
| 3802428 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 60.0 | 5.58e-01 | 93.8% | 67.1% |
| 3796365 | 101.1.1.421 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain, CUT | 0.78 | 61.0 | 4.32e-01 | 98.4% | 28.2% |
| 3218285 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 64.0 | 5.55e-01 | 98.4% | 60.0% |
| 3886164 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.77 | 56.0 | 6.16e-01 | 93.8% | 98.0% |
| 3259221 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.77 | 63.0 | 6.49e-01 | 100.0% | 96.7% |
| 3854655 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.77 | 56.0 | 6.08e-01 | 89.1% | 100.0% |
| 3219209 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 6.31e-01 | 95.3% | 85.7% |
| 3244958 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 59.0 | 5.96e-01 | 95.3% | 84.6% |
| 3997742 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.76 | 64.0 | 6.08e-01 | 93.8% | 94.7% |
| 3218952 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.76 | 59.0 | 6.18e-01 | 98.4% | 94.8% |
| 3274484 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.76 | 56.0 | 5.38e-01 | 90.6% | 68.0% |
| 3327057 | 101.1.1.298 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7645 | 0.76 | 59.0 | 6.12e-01 | 100.0% | 91.7% |
| 3882807 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.75 | 55.0 | 5.15e-01 | 90.6% | 62.5% |
| 3483962 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.75 | 60.0 | 5.44e-01 | 98.4% | 63.3% |
| 3993676 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.75 | 62.0 | 5.25e-01 | 100.0% | 55.2% |
| 163004 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.75 | 57.0 | 5.60e-01 | 98.4% | 76.1% |
| 4586835 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.74 | 63.0 | 6.34e-01 | 100.0% | 93.8% |
| 4974615 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 61.0 | 6.00e-01 | 92.2% | 85.7% |
| 3215991 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 61.0 | 6.11e-01 | 96.9% | 90.8% |
| 3307067 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.73 | 58.0 | 4.03e-01 | 87.5% | 27.1% |
| 3268699 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.73 | 58.0 | 5.56e-01 | 95.3% | 75.3% |
| 3219860 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.73 | 55.0 | 5.70e-01 | 93.8% | 88.3% |
| 3268716 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 60.0 | 5.84e-01 | 100.0% | 82.9% |
| 4201679 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 5.71e-01 | 100.0% | 71.8% |
| 3778380 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 59.0 | 5.72e-01 | 90.6% | 80.0% |
| 3767171 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.72 | 62.0 | 5.50e-01 | 96.9% | 81.1% |
| 3897457 | 101.1.2.360 ↗ | alpha arrays › HTH › HTH › winged helix domain › Homeodomain | 0.72 | 53.0 | 5.22e-01 | 92.2% | 72.9% |
| 3462938 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.72 | 55.0 | 5.51e-01 | 92.2% | 81.5% |
| 3424245 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.72 | 55.0 | 5.69e-01 | 93.8% | 90.0% |
| 3707222 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 55.0 | 5.83e-01 | 92.2% | 96.4% |
| 4155556 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.71 | 62.0 | 5.67e-01 | 98.4% | 84.7% |
| 3947986 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.71 | 53.0 | 5.42e-01 | 90.6% | 85.0% |
| 3728726 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.69 | 60.0 | 5.79e-01 | 100.0% | 86.7% |
| 5057473 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.69 | 58.0 | 5.58e-01 | 95.3% | 94.7% |
| 3389605 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.68 | 60.0 | 4.06e-01 | 96.9% | 33.3% |
| 4016103 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 49.0 | 5.39e-01 | 85.9% | 100.0% |
| 5037171 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.67 | 57.0 | 5.38e-01 | 95.3% | 100.0% |
| 4944587 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.67 | 55.0 | 4.66e-01 | 96.9% | 55.2% |
| 3944885 | 101.1.1.355 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF2857 | 0.67 | 52.0 | 5.24e-01 | 87.5% | 83.1% |
| 3588180 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.67 | 55.0 | 4.82e-01 | 90.6% | 74.7% |
| 1036846 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.67 | 54.0 | 4.49e-01 | 92.2% | 84.2% |
| 3442515 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.66 | 55.0 | 5.15e-01 | 96.9% | 75.0% |
| 4941656 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 50.0 | 4.66e-01 | 85.9% | 66.3% |
| 5082787 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.65 | 54.0 | 4.62e-01 | 90.6% | 68.0% |
| 3591474 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.64 | 43.0 | 2.94e-01 | 70.3% | 21.8% |
| 3641099 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 52.0 | 5.30e-01 | 95.3% | 98.3% |
| 3254719 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.61 | 47.0 | 4.10e-01 | 82.8% | 82.1% |
| 5069770 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.61 | 50.0 | 4.11e-01 | 100.0% | 65.9% |
| 3414102 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.60 | 41.0 | 4.02e-01 | 71.9% | 77.1% |
| 4498619 | 101.1.2.837 ↗ | alpha arrays › HTH › HTH › winged helix domain › Lin1244_N | 0.59 | 49.0 | 4.08e-01 | 100.0% | 63.1% |
| 2139069 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.57 | 49.0 | 3.78e-01 | 96.9% | 48.3% |
| 3937043 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 40.0 | 3.63e-01 | 93.8% | 60.0% |