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NC_022769.1__YP_008771059.1__BigBertha_32__00032

Bact-Vir

NC_022769.1__YP_008771059.1__BigBertha_32__00032

Identity

Accession:
NC_022769 ↗
Kingdom:
phage

Quality

78.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67
PDB
Domain cluster: representative
D2 medium residues 68-136
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dfuA02 1.10.1040.40 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.81 56.0 4.98e-01 73.9% 50.5%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.77 54.0 4.58e-01 73.9% 47.3%
4fmwA00 3.40.1280.30 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › 0.53 38.0 2.84e-01 75.4% 89.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405561 603.1.1.90 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Trehalose_recp 0.73 61.0 3.78e-01 89.9% 20.0%
5040955 5058.1.1.2 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.63 53.0 4.70e-01 97.1% 87.6%
2649358 1107.1.1.1 alpha bundles › Pilin › Pilin › Pilin › TraA 0.58 42.0 4.33e-01 76.8% 80.3%