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NC_022774.1__YP_008771966.1__Slash_64__00064
Bact-VirNC_022774.1__YP_008771966.1__Slash_64__00064
Identity
- Accession:
- NC_022774 ↗
- Kingdom:
- phage
Quality
76.4
mean pLDDT
Taxonomy
TaxID: 1406790
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-75
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00284__D5-68
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 52.0 | 6.05e-01 | 95.8% | 98.0% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 52.0 | 5.50e-01 | 97.2% | 78.1% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 57.0 | 5.16e-01 | 100.0% | 58.3% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 50.0 | 4.62e-01 | 93.0% | 53.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.74 | 60.0 | 6.20e-01 | 100.0% | 94.0% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.43e-01 | 100.0% | 79.4% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.80e-01 | 100.0% | 96.4% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 54.0 | 5.17e-01 | 98.6% | 67.5% |
| 3exmA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.72 | 64.0 | 4.65e-01 | 98.6% | 63.1% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 61.0 | 5.78e-01 | 100.0% | 78.6% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.71 | 58.0 | 4.96e-01 | 97.2% | 56.9% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 50.0 | 5.44e-01 | 100.0% | 89.8% |
| 1wjrA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 55.0 | 4.54e-01 | 100.0% | 48.0% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 4.39e-01 | 100.0% | 44.0% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.59e-01 | 98.6% | 95.5% |
| 2rhiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 55.0 | 4.70e-01 | 100.0% | 60.7% |
| 1lshA01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.63 | 53.0 | 3.61e-01 | 94.4% | 89.0% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.63 | 48.0 | 3.43e-01 | 84.5% | 64.3% |
| 4xmeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 51.0 | 3.94e-01 | 100.0% | 91.8% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 47.0 | 3.98e-01 | 88.7% | 78.7% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 49.0 | 3.77e-01 | 98.6% | 92.1% |
| 2cwzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 47.0 | 3.80e-01 | 88.7% | 85.4% |
| 5c98B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.58 | 41.0 | 3.43e-01 | 76.1% | 72.1% |
| 3kuvB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 45.0 | 3.71e-01 | 85.9% | 89.5% |
| 3kh8A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 40.0 | 3.31e-01 | 74.6% | 90.2% |
| 3qooA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 47.0 | 3.81e-01 | 90.1% | 87.3% |
| 3bbjA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.57 | 43.0 | 2.92e-01 | 81.7% | 39.3% |
| 2uvaG08 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 39.0 | 2.57e-01 | 73.2% | 42.7% |
| 5e1vB00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.56 | 41.0 | 2.78e-01 | 78.9% | 50.4% |
| 2wxwA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 41.0 | 3.17e-01 | 78.9% | 61.4% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.54 | 38.0 | 3.63e-01 | 73.2% | 63.9% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.54 | 45.0 | 4.00e-01 | 100.0% | 94.5% |
| 3k67A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 41.0 | 3.31e-01 | 87.3% | 81.4% |
| 3cqzH00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 39.0 | 3.35e-01 | 78.9% | 99.1% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.71e-01 | 91.5% | 87.7% |
| 3ir3A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 42.0 | 3.49e-01 | 88.7% | 96.8% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 42.0 | 3.41e-01 | 88.7% | 83.8% |
| 3gekA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 39.0 | 3.26e-01 | 83.1% | 87.8% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 38.0 | 3.47e-01 | 78.9% | 88.4% |
| 3cjyA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.51 | 39.0 | 2.75e-01 | 84.5% | 29.6% |
| 4ae8D00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 41.0 | 3.16e-01 | 90.1% | 77.6% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 59.0 | 4.57e-01 | 100.0% | 35.3% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 61.0 | 5.57e-01 | 100.0% | 63.3% |
| 3673317 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 59.0 | 6.61e-01 | 98.6% | 100.0% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.79 | 56.0 | 5.37e-01 | 98.6% | 65.0% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.79 | 60.0 | 5.29e-01 | 100.0% | 57.0% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.79 | 56.0 | 5.29e-01 | 100.0% | 62.4% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 60.0 | 5.09e-01 | 100.0% | 50.4% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.78 | 59.0 | 5.45e-01 | 100.0% | 63.3% |
| 3996279 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.78 | 57.0 | 5.50e-01 | 95.8% | 68.8% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.77 | 55.0 | 5.09e-01 | 100.0% | 58.9% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.77 | 54.0 | 5.00e-01 | 98.6% | 57.8% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 53.0 | 5.51e-01 | 100.0% | 78.5% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 54.0 | 5.83e-01 | 100.0% | 88.3% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 54.0 | 4.99e-01 | 100.0% | 58.9% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 55.0 | 5.57e-01 | 100.0% | 77.1% |
| 3752623 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.75 | 58.0 | 5.11e-01 | 100.0% | 57.1% |
| 3407821 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 55.0 | 5.13e-01 | 100.0% | 64.7% |
| 4002985 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 57.0 | 6.20e-01 | 98.6% | 96.7% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 55.0 | 5.73e-01 | 100.0% | 87.7% |
| 3763814 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.73 | 56.0 | 4.52e-01 | 100.0% | 43.0% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 55.0 | 5.21e-01 | 100.0% | 67.1% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 52.0 | 4.83e-01 | 100.0% | 58.9% |
| 3699736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 66.0 | 5.99e-01 | 100.0% | 87.2% |
| 3515145 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.73 | 58.0 | 5.23e-01 | 100.0% | 63.2% |
| 3866571 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.73 | 57.0 | 3.49e-01 | 100.0% | 13.5% |
| 3368864 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 57.0 | 5.96e-01 | 98.6% | 92.3% |
| 3936468 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 55.0 | 4.92e-01 | 100.0% | 58.0% |
| 3457106 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 57.0 | 5.91e-01 | 98.6% | 92.3% |
| 4929743 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 4.84e-01 | 98.6% | 59.5% |
| 167391 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.71 | 63.0 | 4.49e-01 | 98.6% | 58.1% |
| 4196537 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.71 | 59.0 | 5.87e-01 | 98.6% | 85.3% |
| 3893808 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.70 | 55.0 | 3.58e-01 | 100.0% | 19.1% |
| 4278184 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.70 | 58.0 | 5.58e-01 | 100.0% | 80.0% |
| 3214653 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 4.83e-01 | 97.2% | 61.1% |
| 5081091 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 60.0 | 5.54e-01 | 100.0% | 93.7% |
| 3313139 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 63.0 | 4.67e-01 | 100.0% | 46.3% |
| 3590858 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 5.87e-01 | 94.4% | 100.0% |
| 3588727 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 57.0 | 5.79e-01 | 100.0% | 91.4% |
| 3772638 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.67 | 54.0 | 5.22e-01 | 100.0% | 79.0% |
| 3792195 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 54.0 | 4.78e-01 | 100.0% | 62.0% |
| 4228570 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 5.58e-01 | 100.0% | 90.0% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.65 | 59.0 | 4.64e-01 | 100.0% | 49.0% |
| 3642001 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.65 | 55.0 | 5.53e-01 | 97.2% | 92.9% |
| 2701178 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.64 | 52.0 | 4.93e-01 | 100.0% | 74.7% |
| 3724971 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 59.0 | 4.99e-01 | 100.0% | 63.6% |
| 3637664 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.64 | 57.0 | 4.80e-01 | 100.0% | 60.0% |
| 3997949 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 45.0 | 4.29e-01 | 100.0% | 62.2% |
| 3298989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 50.0 | 4.34e-01 | 100.0% | 56.4% |
| 3453774 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.60 | 51.0 | 3.92e-01 | 95.8% | 75.1% |
| 3662854 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.59 | 54.0 | 4.05e-01 | 100.0% | 44.2% |
| 3449040 | 9.1.1.34 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PAP_fibrillin | 0.59 | 50.0 | 3.88e-01 | 100.0% | 74.9% |
| 3937047 | 9.1.1.55 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 | 0.58 | 49.0 | 4.18e-01 | 94.4% | 95.0% |
| 3392175 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 49.0 | 3.31e-01 | 91.5% | 85.6% |
| 5061559 | 5.1.4.235 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st | 0.58 | 47.0 | 3.07e-01 | 91.5% | 82.7% |
| 5023947 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.56 | 46.0 | 3.51e-01 | 90.1% | 45.3% |
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.56 | 50.0 | 3.91e-01 | 100.0% | 50.0% |
| 3701349 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 2.72e-01 | 88.7% | 38.6% |
| 3584246 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.54 | 45.0 | 4.02e-01 | 93.0% | 76.9% |
| 3742647 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.53 | 39.0 | 2.65e-01 | 83.1% | 34.1% |
| 3619225 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.53 | 45.0 | 3.40e-01 | 97.2% | 48.3% |
| 3506182 | 5.1.5.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_RFWD3 | 0.52 | 41.0 | 2.69e-01 | 90.1% | 92.2% |
| 1885705 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.51 | 39.0 | 2.52e-01 | 83.1% | 43.2% |
| 3473080 | 5.1.4.329 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 | 0.51 | 41.0 | 2.57e-01 | 90.1% | 85.2% |
| 3459135 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.51 | 43.0 | 3.79e-01 | 98.6% | 97.3% |
D2
medium
residues 89-126