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NC_022774.1__YP_008772007.1__Slash_105__00105
Bact-VirNC_022774.1__YP_008772007.1__Slash_105__00105
Identity
- Accession:
- NC_022774 ↗
- Kingdom:
- phage
Quality
92.5
mean pLDDT
Taxonomy
TaxID: 1406790
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-38
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.67 | 54.0 | 4.93e-01 | 100.0% | 69.6% |
| 3abgB01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.65 | 44.0 | 2.98e-01 | 75.7% | 40.1% |
| 1fsuA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.65 | 45.0 | 2.62e-01 | 73.0% | 21.8% |
| 4aefA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 50.0 | 3.87e-01 | 100.0% | 83.5% |
| 3weeB03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.63 | 51.0 | 3.75e-01 | 100.0% | 78.3% |
| 3h09A04 | 4.10.1240.40 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.62 | 48.0 | 4.17e-01 | 100.0% | 59.7% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 3.77e-01 | 100.0% | 88.4% |
| 3venA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 42.0 | 2.69e-01 | 86.5% | 18.0% |
| 3s2cJ01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 39.0 | 2.73e-01 | 73.0% | 99.3% |
| 1fi8C00 | 2.60.40.550 | Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin | 0.57 | 42.0 | 3.38e-01 | 83.8% | 84.6% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 48.0 | 3.09e-01 | 100.0% | 32.2% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 46.0 | 2.81e-01 | 91.9% | 45.2% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 38.0 | 2.69e-01 | 75.7% | 21.0% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.54 | 45.0 | 4.28e-01 | 97.3% | 82.6% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 41.0 | 3.31e-01 | 100.0% | 77.2% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.53 | 38.0 | 2.33e-01 | 78.4% | 14.7% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 43.0 | 4.00e-01 | 100.0% | 72.5% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.51 | 42.0 | 3.87e-01 | 100.0% | 84.3% |
| 3fbxA00 | 3.60.60.30 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › | 0.51 | 34.0 | 1.99e-01 | 75.7% | 15.8% |
| 8enbA01 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.51 | 36.0 | 3.15e-01 | 100.0% | 79.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4556132 | 375.1.1.74 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mu-like_Com | 0.82 | 65.0 | 6.65e-01 | 91.9% | 97.1% |
| 3599938 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 63.0 | 5.74e-01 | 91.9% | 72.0% |
| 3457887 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 67.0 | 6.35e-01 | 100.0% | 82.2% |
| 4969277 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 63.0 | 6.25e-01 | 100.0% | 92.5% |
| 5082049 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 61.0 | 6.05e-01 | 97.3% | 90.0% |
| 3343242 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 62.0 | 6.15e-01 | 100.0% | 95.0% |
| 5038137 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 59.0 | 5.89e-01 | 97.3% | 95.0% |
| 3387951 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 60.0 | 5.95e-01 | 97.3% | 95.0% |
| 5058894 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 60.0 | 5.79e-01 | 100.0% | 91.1% |
| 3308642 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 59.0 | 6.08e-01 | 91.9% | 97.1% |
| 4982253 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 56.0 | 5.68e-01 | 91.9% | 97.1% |
| 3179128 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.72 | 61.0 | 6.03e-01 | 100.0% | 92.5% |
| 3837494 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 59.0 | 6.11e-01 | 91.9% | 100.0% |
| 4968628 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 63.0 | 6.15e-01 | 97.3% | 97.5% |
| 5040906 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 53.0 | 5.29e-01 | 94.6% | 100.0% |
| 4968629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 57.0 | 5.09e-01 | 100.0% | 70.4% |
| 5080678 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.65 | 53.0 | 4.83e-01 | 100.0% | 74.5% |
| 4038151 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.65 | 53.0 | 5.39e-01 | 91.9% | 97.1% |
| 3236516 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.63 | 47.0 | 2.76e-01 | 100.0% | 9.3% |
| 5083127 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 48.0 | 4.88e-01 | 91.9% | 100.0% |
| 4982196 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 49.0 | 5.04e-01 | 89.2% | 94.3% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 48.0 | 4.41e-01 | 91.9% | 84.0% |
| 3797637 | 4291.1.1.0 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein | 0.60 | 43.0 | 2.57e-01 | 83.8% | 29.5% |
| 4989457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 47.0 | 4.31e-01 | 89.2% | 84.0% |
| 4927544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 47.0 | 4.80e-01 | 91.9% | 97.1% |
| 3281519 | 10.32.1.171 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SsfX3_N | 0.58 | 41.0 | 2.81e-01 | 75.7% | 51.6% |
| 4344077 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.56 | 46.0 | 4.53e-01 | 94.6% | 87.5% |
| 3890922 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.56 | 44.0 | 3.36e-01 | 100.0% | 71.4% |
| 4121946 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.54 | 37.0 | 2.56e-01 | 73.0% | 21.3% |
| 4991612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 43.0 | 3.58e-01 | 94.6% | 84.3% |
| 5047657 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 39.0 | 3.67e-01 | 94.6% | 83.6% |
| 4990252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 41.0 | 3.43e-01 | 94.6% | 82.4% |
| 3246286 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.52 | 40.0 | 2.49e-01 | 100.0% | 34.4% |
| 3714275 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.51 | 42.0 | 2.59e-01 | 100.0% | 73.1% |
| 3483369 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.50 | 35.0 | 2.18e-01 | 81.1% | 11.8% |