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NC_022774.1__YP_008772012.1__Slash_110__00110

Bact-Vir

NC_022774.1__YP_008772012.1__Slash_110__00110

Identity

Accession:
NC_022774 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Slashvirus› Bacillus_phage_Slash

TaxID: 1406790

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-82
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z1kA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.69 38.0 3.73e-01 91.4% 50.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.67 58.0 4.74e-01 97.5% 90.3%
2a0uB01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.66 53.0 4.24e-01 90.1% 43.8%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 37.0 3.47e-01 91.4% 45.9%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.64 46.0 3.12e-01 98.8% 22.1%
1w2wA00 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.64 51.0 3.82e-01 87.7% 34.8%
1t9kA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.62 48.0 4.04e-01 93.8% 48.6%
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.62 33.0 4.18e-01 91.4% 95.3%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 41.0 2.97e-01 71.6% 50.4%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 52.0 4.37e-01 98.8% 83.8%
1vkwA02 3.40.109.30 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 0.60 37.0 3.52e-01 92.6% 52.1%
4esnA00 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.59 40.0 4.09e-01 87.7% 73.1%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.58 43.0 3.34e-01 80.2% 45.0%
2g7jA00 3.90.1150.40 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 0.58 42.0 3.82e-01 79.0% 56.2%
2ijaA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.57 41.0 2.87e-01 76.5% 38.7%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 4.11e-01 90.1% 88.8%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 37.0 4.00e-01 71.6% 100.0%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.54 37.0 2.75e-01 70.4% 77.5%
1kutB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 32.0 3.16e-01 88.9% 56.2%
2kb3A01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 41.0 3.61e-01 84.0% 63.3%
2z3zA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.52 47.0 2.99e-01 100.0% 21.6%
1v8wA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 38.0 3.19e-01 80.2% 83.8%
6grrB01 3.30.457.10 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain 0.51 35.0 3.57e-01 84.0% 73.4%
3ip3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 36.0 2.75e-01 74.1% 92.1%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.50 43.0 2.67e-01 92.6% 18.4%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.91e-01 93.8% 29.1%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.50 36.0 3.42e-01 76.5% 71.0%
1yprA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.50 41.0 3.61e-01 91.4% 99.2%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742945 12.1.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.68 37.0 3.79e-01 90.1% 53.8%
3739033 12.1.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.68 38.0 3.76e-01 91.4% 51.8%
3883825 220.1.1.173 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK 0.65 56.0 5.02e-01 97.5% 98.3%
3254736 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.64 37.0 3.67e-01 91.4% 52.9%
3511972 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.64 39.0 3.67e-01 100.0% 50.0%
3290823 809.1.1.0 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.63 32.0 3.33e-01 86.4% 52.0%
3739851 12.1.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.63 36.0 3.59e-01 91.4% 54.1%
4102113 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.63 52.0 4.34e-01 92.6% 53.1%
3194506 220.1.1.201 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.62 49.0 4.51e-01 87.7% 100.0%
3742934 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.62 35.0 3.55e-01 90.1% 55.0%
3464402 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 30.0 3.36e-01 93.8% 64.6%
3744768 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.56 44.0 3.95e-01 90.1% 60.0%
3703426 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 41.0 2.76e-01 88.9% 20.7%
4890224 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.54 45.0 2.72e-01 90.1% 14.7%
4613622 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.53 43.0 2.83e-01 90.1% 21.2%
3637723 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.53 44.0 2.83e-01 97.5% 18.5%
3598106 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.91e-01 95.1% 98.3%
5039195 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.52 40.0 3.00e-01 84.0% 48.8%
4968280 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 38.0 3.73e-01 79.0% 76.7%
3343255 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.52 43.0 2.68e-01 92.6% 20.2%
4578445 206.1.2.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt 0.51 46.0 3.33e-01 100.0% 67.0%
4010196 331.12.1.0 ↗ a+b two layers › TBP-like › YugN-like › YugN-like 0.51 41.0 3.79e-01 87.7% 76.2%
3470543 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.51 41.0 2.73e-01 88.9% 20.9%
3404871 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.51 36.0 3.31e-01 74.1% 94.5%
3496419 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.39e-01 88.9% 21.6%
3485184 5.1.4.219 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.50 45.0 2.71e-01 100.0% 25.6%
D2 high residues 87-170
PDB
Domain cluster: rep: KF669663.1__AGY48794.1__Staley_111__00111__D2-71