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NC_022775.1__YP_008772054.1__phiJB_00041__00041

Bact-Vir

NC_022775.1__YP_008772054.1__phiJB_00041__00041

Identity

Accession:
NC_022775 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_phage_phiJB

TaxID: 1399941

Cluster

View cluster (241 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-57_110-127
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ml8A01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.79 36.0 4.67e-01 100.0% 79.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.74 39.0 3.45e-01 100.0% 37.9%
5kiqA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.70 35.0 3.43e-01 100.0% 43.1%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.69 36.0 2.33e-01 100.0% 11.0%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 37.0 3.71e-01 98.4% 51.5%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 38.0 2.97e-01 100.0% 27.3%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 35.0 3.50e-01 98.4% 47.8%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 37.0 3.79e-01 100.0% 54.7%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 37.0 3.07e-01 100.0% 32.1%
2wmmA02 3.30.70.3500 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MukB, hinge domain 0.65 30.0 2.45e-01 98.4% 23.0%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 34.0 3.28e-01 98.4% 44.6%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 37.0 3.12e-01 100.0% 36.1%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.62 53.0 4.10e-01 100.0% 72.4%
3r6aB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 34.0 2.77e-01 100.0% 27.9%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.61 42.0 4.66e-01 100.0% 92.0%
3vcxA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.59 32.0 3.46e-01 98.4% 58.5%
2ichA02 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.58 36.0 2.79e-01 98.4% 31.5%
4huzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 32.0 2.43e-01 100.0% 19.9%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.95e-01 100.0% 63.0%
2dmkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 4.11e-01 100.0% 68.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 32.0 3.67e-01 98.4% 83.0%
2a74D01 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.53 46.0 3.63e-01 100.0% 47.7%
3m1cA04 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.53 46.0 3.68e-01 100.0% 50.8%
3l5iA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 47.0 4.24e-01 100.0% 72.7%
7b7nH01 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.52 45.0 3.56e-01 96.9% 48.0%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 46.0 3.89e-01 100.0% 67.3%
6fhvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.85e-01 100.0% 74.5%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3788142 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 38.0 3.04e-01 100.0% 27.5%
3924612 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.70 38.0 2.95e-01 100.0% 25.9%
3704939 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 37.0 3.32e-01 100.0% 37.8%
4144845 220.1.1.289 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › HdcB 0.66 35.0 2.88e-01 100.0% 30.0%
5030086 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 3.95e-01 98.4% 66.2%
3519567 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.31e-01 100.0% 63.6%
3578826 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 4.96e-01 100.0% 93.8%
5033989 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 4.62e-01 98.4% 96.4%
3971451 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 49.0 3.65e-01 100.0% 45.7%
5061954 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 4.26e-01 98.4% 61.0%
5060717 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.57 43.0 4.20e-01 98.4% 74.3%
3894642 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.12e-01 100.0% 70.5%
3699298 375.5.1.1 ↗ few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind 0.54 41.0 4.26e-01 95.3% 86.7%
3869565 11.1.1.794 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 0.54 48.0 4.08e-01 100.0% 66.7%
1559083 11.1.1.248 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 0.53 45.0 3.66e-01 100.0% 48.8%
3337469 11.1.1.720 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IG_AIR9 0.53 45.0 3.84e-01 98.4% 63.6%
3511265 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 3.92e-01 100.0% 64.5%
3797540 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 46.0 4.08e-01 100.0% 74.7%
3625368 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 45.0 3.72e-01 100.0% 60.0%
3500023 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 45.0 3.53e-01 100.0% 71.4%
3501933 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.50 46.0 3.85e-01 100.0% 64.8%
3313023 11.1.1.389 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C 0.50 43.0 3.56e-01 100.0% 75.8%
3431199 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 44.0 3.01e-01 100.0% 28.0%
D2 medium residues 74-109_128-158
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 51.0 3.57e-01 92.5% 87.9%
3bm7A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.16e-01 88.1% 59.4%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 48.0 3.14e-01 94.0% 60.0%
1q8bA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 47.0 4.28e-01 94.0% 67.7%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 3.68e-01 82.1% 56.9%
6bq9A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.55 43.0 3.94e-01 88.1% 62.8%
3qw9B00 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.55 46.0 3.58e-01 98.5% 51.8%
6k3lB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 39.0 3.63e-01 77.6% 57.1%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.55 43.0 3.91e-01 85.1% 66.7%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.55 47.0 4.26e-01 98.5% 74.0%
3b82A06 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 47.0 3.93e-01 98.5% 82.6%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.55 48.0 4.13e-01 100.0% 68.5%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 3.76e-01 83.6% 61.5%
5hy0A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.54 45.0 3.87e-01 92.5% 96.3%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.54 41.0 2.87e-01 85.1% 23.5%
2anrA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 43.0 4.16e-01 94.0% 76.2%
1x7vA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 4.13e-01 98.5% 67.3%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 42.0 3.96e-01 94.0% 68.7%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.54 44.0 3.91e-01 92.5% 75.0%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.53 47.0 3.28e-01 97.0% 76.4%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.53 46.0 3.61e-01 97.0% 45.7%
3e3pA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.98e-01 86.6% 76.9%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 42.0 3.85e-01 97.0% 64.4%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 3.80e-01 86.6% 67.4%
5hweA01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.53 43.0 3.76e-01 92.5% 96.3%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.65e-01 83.6% 59.8%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.53 41.0 2.84e-01 89.6% 22.6%
1b7yB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.53 44.0 4.10e-01 94.0% 79.1%
3hx9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.53e-01 82.1% 59.2%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.78e-01 98.5% 70.0%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.74e-01 91.0% 62.0%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 43.0 3.84e-01 92.5% 69.8%
5optY00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.49e-01 89.6% 52.8%
1ywxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 43.0 3.92e-01 94.0% 67.4%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 42.0 3.49e-01 95.5% 96.4%
1we8A01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.52 41.0 3.87e-01 91.0% 73.8%
2xzmP00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.29e-01 89.6% 42.6%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.52 40.0 3.04e-01 86.6% 33.9%
4hl9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.84e-01 92.5% 66.0%
6urtA02 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 44.0 4.13e-01 100.0% 80.7%
3pcoB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.52 44.0 4.02e-01 98.5% 76.6%
6n3oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.75e-01 94.0% 66.7%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.52 38.0 3.56e-01 80.6% 67.0%
2f7lA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.51 41.0 3.87e-01 91.0% 82.4%
4redB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.62e-01 83.6% 65.5%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.51 42.0 3.83e-01 92.5% 66.0%
2v50D07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.51 40.0 3.54e-01 83.6% 63.2%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 3.70e-01 100.0% 55.7%
5xyiY00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 41.0 3.63e-01 94.0% 58.1%
2f7vA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 44.0 3.78e-01 97.0% 78.7%
4zosB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 40.0 3.69e-01 92.5% 63.9%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 38.0 2.93e-01 83.6% 81.0%
4c8yA01 3.30.70.1890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 41.0 3.55e-01 88.1% 61.9%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 40.0 3.76e-01 100.0% 68.5%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 43.0 3.82e-01 98.5% 67.3%
1u5qA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.45e-01 85.1% 58.3%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 41.0 2.99e-01 94.0% 88.3%
2l03A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.50 31.0 3.08e-01 79.1% 55.4%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3301450 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 47.0 3.47e-01 92.5% 56.8%
3679600 305.1.1.2 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.57 47.0 4.04e-01 91.0% 64.5%
3816413 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.57 48.0 3.93e-01 95.5% 49.2%
3235144 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 48.0 3.20e-01 95.5% 66.5%
3297269 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.57 47.0 4.07e-01 95.5% 62.7%
3816949 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 47.0 3.17e-01 95.5% 66.3%
3778963 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.56 49.0 4.08e-01 98.5% 59.2%
5013852 3501.1.1.1 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.56 46.0 4.23e-01 88.1% 71.8%
4360897 304.102.1.2 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.56 46.0 3.37e-01 91.0% 80.5%
1505699 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.56 49.0 4.48e-01 97.0% 81.6%
5039693 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.56 47.0 4.34e-01 97.0% 70.8%
4503003 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.56 48.0 4.23e-01 97.0% 70.0%
4012488 304.4.1.4 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.56 46.0 4.15e-01 94.0% 67.4%
3869636 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.56 46.0 2.88e-01 95.5% 41.2%
4226394 513.2.1.0 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Putative transferase PH0793 N-terminal domain › Putative transferase PH0793 N-terminal domain 0.55 46.0 3.02e-01 95.5% 22.5%
3929967 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.55 47.0 3.76e-01 94.0% 49.2%
4946999 304.102.1.2 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.55 46.0 3.32e-01 97.0% 75.8%
5032056 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 45.0 3.96e-01 94.0% 60.2%
3882395 864.1.1.8 ↗ a+b two layers › DLC › DLC › DLC › CEP76_C 0.55 46.0 3.69e-01 94.0% 46.7%
4275789 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.55 46.0 4.15e-01 95.5% 73.1%
3630348 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 44.0 2.50e-01 95.5% 7.1%
3330535 304.8.1.55 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_C 0.55 45.0 4.33e-01 91.0% 86.7%
3617026 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 45.0 3.01e-01 95.5% 58.7%
3885537 327.16.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.54 42.0 4.10e-01 85.1% 80.0%
4562806 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.54 47.0 4.26e-01 98.5% 76.6%
5035224 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.54 46.0 4.20e-01 97.0% 71.1%
4048096 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.54 47.0 4.34e-01 100.0% 82.2%
3660458 304.126.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.54 43.0 3.89e-01 89.6% 78.9%
3773831 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 44.0 2.60e-01 94.0% 26.4%
4942718 304.109.1.4 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e 0.54 45.0 3.95e-01 95.5% 62.0%
4094675 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.54 46.0 4.30e-01 97.0% 80.0%
3375692 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.54 47.0 3.03e-01 98.5% 47.4%
3647228 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.53 42.0 3.44e-01 94.0% 45.3%
3322497 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.53 44.0 4.22e-01 94.0% 78.8%
4534304 304.109.1.4 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e 0.53 45.0 4.11e-01 95.5% 70.0%
4321644 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.53 45.0 4.51e-01 95.5% 90.0%
4956430 304.109.1.4 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e 0.53 44.0 4.01e-01 95.5% 68.9%
4053933 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.53 46.0 4.00e-01 98.5% 71.4%
3283186 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.53 40.0 3.19e-01 83.6% 42.8%
3603456 304.8.1.82 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.53 45.0 4.17e-01 98.5% 78.9%
4928084 304.4.1.4 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.53 41.0 3.76e-01 88.1% 65.3%
4084501 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.53 45.0 3.94e-01 98.5% 66.7%
3808918 387.1.5.7 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL 0.53 42.0 4.42e-01 86.6% 100.0%
5005033 304.39.1.0 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.53 42.0 4.04e-01 94.0% 76.2%
4935501 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.53 44.0 4.42e-01 95.5% 90.0%
4673207 256.1.1.10 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › MinE 0.52 44.0 4.13e-01 95.5% 78.8%
4264245 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.52 41.0 3.76e-01 86.6% 66.7%
4964284 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.52 43.0 4.39e-01 94.0% 95.4%
4272563 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.52 43.0 3.84e-01 94.0% 65.0%
4514876 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.52 43.0 4.27e-01 94.0% 87.1%
4992631 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.52 44.0 4.07e-01 98.5% 72.2%
5031924 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.52 44.0 4.51e-01 97.0% 98.5%
3272830 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.52 39.0 3.62e-01 85.1% 64.4%
4422649 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.52 45.0 4.05e-01 98.5% 76.6%
3235142 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 41.0 2.72e-01 97.0% 18.1%
5056848 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.52 43.0 4.36e-01 95.5% 95.4%
5024024 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.52 43.0 3.95e-01 97.0% 70.2%
3513198 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 41.0 4.04e-01 89.6% 100.0%
3331686 304.109.1.4 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e 0.51 42.0 3.89e-01 92.5% 68.9%
4522746 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 42.0 3.20e-01 89.6% 40.6%
4377299 304.18.1.0 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS 0.51 44.0 3.87e-01 98.5% 68.6%
4028722 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.51 43.0 3.59e-01 97.0% 52.0%
4979660 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.51 44.0 4.14e-01 98.5% 80.0%
3379093 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.51 40.0 3.96e-01 85.1% 82.9%
5034592 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 43.0 3.71e-01 97.0% 59.1%
3344504 387.1.5.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.51 40.0 4.16e-01 88.1% 95.3%
3260475 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 39.0 2.55e-01 91.0% 58.4%
1172545 304.39.1.1 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.51 43.0 3.84e-01 98.5% 66.7%
151816 304.39.1.1 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.51 43.0 3.79e-01 95.5% 65.3%
4212885 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.51 43.0 4.38e-01 95.5% 96.9%
4941715 304.57.1.1 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 0.50 40.0 3.37e-01 91.0% 52.4%
3267305 304.45.1.1 ↗ a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK 0.50 41.0 3.08e-01 95.5% 35.4%