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NC_022972.2__YP_008857916.1__ArV2_gp45__00045

Bact-Vir

NC_022972.2__YP_008857916.1__ArV2_gp45__00045

Identity

Accession:
NC_022972 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-158
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.63 32.0 3.76e-01 80.9% 68.2%
1aluA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.57 37.0 3.74e-01 94.7% 63.1%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 37.0 3.77e-01 95.4% 65.8%
3kp9A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.54 39.0 3.90e-01 94.7% 69.8%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 34.0 3.62e-01 82.2% 74.2%
3wscA00 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.51 44.0 3.74e-01 93.4% 95.6%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.51 32.0 3.91e-01 79.6% 96.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3777032 5054.1.1.11 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › SK_channel 0.58 43.0 3.83e-01 77.0% 90.0%
3687029 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.58 36.0 4.42e-01 80.9% 100.0%