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NC_022979.1__YP_008858584.1__GRADUATION_46__00046

Bact-Vir

NC_022979.1__YP_008858584.1__GRADUATION_46__00046

Identity

Accession:
NC_022979 ↗
Kingdom:
phage

Quality

86.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-131
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h3gX02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 29.0 2.44e-01 75.3% 30.2%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.53 44.0 2.79e-01 92.8% 68.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044642 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.72 43.0 3.08e-01 83.5% 22.4%
3364309 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.59 39.0 3.55e-01 73.2% 49.2%
4591449 7556.1.1.1 a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C 0.55 32.0 2.08e-01 83.5% 12.7%
4030335 2484.1.1.39 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.52 39.0 2.91e-01 78.4% 40.4%