NC_022989.1__YP_008859596.1__X813_gp18__00018

Bact-Vir

Identity

70.6 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Cequinquevirus› Lactobacillus_phage_LL-Ku

TaxID: 2892343

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-57_89-133

PDB

D2 high residues 145-255

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yu0A02	2.80.20.10	Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein	0.65	59.0	5.35e-01	100.0%	90.4%
2xc8A00	2.60.40.2980	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.64	55.0	5.41e-01	93.7%	88.4%
3c2qA01	2.40.420.10	Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › conserved putative lor/sdh protein from methanococcus maripaludis s2 domain	0.52	38.0	4.16e-01	96.4%	94.3%
1gn4A02	3.55.40.20	Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain	0.52	43.0	4.28e-01	88.3%	88.7%
2j8bA00	2.10.60.10	Mainly Beta › Ribbon › CD59 › CD59	0.52	33.0	3.81e-01	79.3%	89.7%
1f94A00	2.10.60.10	Mainly Beta › Ribbon › CD59 › CD59	0.52	30.0	3.67e-01	79.3%	98.4%
3d4rB02	2.40.50.100	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain	0.52	26.0	3.31e-01	96.4%	80.9%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3581088	3945.1.1.0 ↗	alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain	0.54	41.0	3.79e-01	81.1%	64.1%
3945811	70.4.1.7 ↗	beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › XM1_gp53_minor_capsid	0.52	29.0	3.71e-01	83.8%	98.3%
8264	382.1.1.2 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP	0.52	30.0	3.67e-01	79.3%	98.4%
4337308	10.37.1.0 ↗	beta sandwiches › jelly-roll › TerD › TerD	0.51	39.0	3.39e-01	80.2%	92.9%
3637393	3792.1.1.2 ↗	beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd	0.51	29.0	3.24e-01	70.3%	70.0%
3165363	1.1.2.9 ↗	beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1	0.51	40.0	3.57e-01	86.5%	99.4%

D3 high residues 261-367

PDB

D4 high residues 377-621

PDB

Domain cluster: rep: NC_048085.1__YP_009814461.1__HOU40_gp074__00074__D328-563

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03009.24 best	GDPD	108.0	1.20e-30	95.9%	98.4%

D5 high residues 645-783

PDB

D6 high residues 794-872

PDB