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NC_023005.1__YP_008873145.1__X917_gp19__00019

Bact-Vir

NC_023005.1__YP_008873145.1__X917_gp19__00019

Identity

Accession:
NC_023005 ↗
Kingdom:
phage

Quality

69.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autotranscriptaviridae› Phutvirus› Pseudomonas_phage_PPpW-4

TaxID: 1279083

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-85
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25708.2 best Phage_T7_Gp5_9 46.7 3.20e-12 75.3% 84.8%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kn1B00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.54 47.0 3.71e-01 98.7% 98.1%
1cpcB00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.52 45.0 3.47e-01 96.1% 96.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3576195 109.4.1.435 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_N 0.57 41.0 2.93e-01 77.9% 67.8%
5007583 3646.1.1.1 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.56 46.0 3.33e-01 92.2% 36.1%
2137382 106.1.1.2 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Phycobilisome 0.54 47.0 3.66e-01 98.7% 96.0%
4947024 4993.1.1.0 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit 0.53 36.0 3.40e-01 98.7% 57.9%
4107418 4993.1.1.1 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatC 0.51 36.0 3.38e-01 98.7% 57.9%
4138369 4993.1.1.1 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatC 0.51 37.0 3.47e-01 79.2% 62.1%
4332824 106.1.1.2 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Phycobilisome 0.51 43.0 3.47e-01 97.4% 98.8%
51280 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.50 43.0 3.47e-01 100.0% 98.8%